RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
SYNPO2-201ENST00000307142 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
SYNPO2-201ENST00000307142 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
SYNPO2-201ENST00000307142 GOLGA2Q08379 1002 aa14□□□□□ -0.17
SYNPO2-201ENST00000307142 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
SYNPO2-201ENST00000307142 MORC1Q86VD1 984 aa14□□□□□ -0.17
SYNPO2-201ENST00000307142 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
SYNPO2-201ENST00000307142 VPS8Q8N3P4 1428 aa13.99□□□□□ -0.17
SYNPO2-201ENST00000307142 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
SYNPO2-201ENST00000307142 NUTM2FA1L443 756 aa13.98□□□□□ -0.17
SYNPO2-201ENST00000307142 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
SYNPO2-201ENST00000307142 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
SYNPO2-201ENST00000307142 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
SYNPO2-201ENST00000307142 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.18
SYNPO2-201ENST00000307142 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
SYNPO2-201ENST00000307142 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
SYNPO2-201ENST00000307142 TULP1O00294 542 aaPredicted RBP13.91□□□□□ -0.18
SYNPO2-201ENST00000307142 NESP48681 1621 aa13.91□□□□□ -0.18
SYNPO2-201ENST00000307142 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
SYNPO2-201ENST00000307142 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
SYNPO2-201ENST00000307142 EIF3AQ14152 1382 aaKnown RBP13.9□□□□□ -0.18
SYNPO2-201ENST00000307142 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
SYNPO2-201ENST00000307142 MIER1Q8N108 512 aa13.9□□□□□ -0.18
SYNPO2-201ENST00000307142 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
SYNPO2-201ENST00000307142 EVA1CP58658 441 aa13.89□□□□□ -0.19
SYNPO2-201ENST00000307142 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
SYNPO2-201ENST00000307142 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
SYNPO2-201ENST00000307142 LTV1Q96GA3 475 aaPredicted RBP13.86□□□□□ -0.19
SYNPO2-201ENST00000307142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNPO2-201ENST00000307142 CDK11BP21127 795 aaKnown RBP13.85□□□□□ -0.19
SYNPO2-201ENST00000307142 AMPHP49418 695 aa13.85□□□□□ -0.19
SYNPO2-201ENST00000307142 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
SYNPO2-201ENST00000307142 TRAK1Q9UPV9 953 aa13.85□□□□□ -0.19
SYNPO2-201ENST00000307142 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
SYNPO2-201ENST00000307142 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
SYNPO2-201ENST00000307142 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
SYNPO2-201ENST00000307142 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
SYNPO2-201ENST00000307142 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
SYNPO2-201ENST00000307142 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
SYNPO2-201ENST00000307142 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
SYNPO2-201ENST00000307142 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
SYNPO2-201ENST00000307142 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
SYNPO2-201ENST00000307142 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
SYNPO2-201ENST00000307142 UACAQ9BZF9 1416 aa13.79□□□□□ -0.2
SYNPO2-201ENST00000307142 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
SYNPO2-201ENST00000307142 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
SYNPO2-201ENST00000307142 MSH5O43196 834 aa13.79□□□□□ -0.2
SYNPO2-201ENST00000307142 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
SYNPO2-201ENST00000307142 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 G3V3G9 751 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 ATF3P18847 181 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 MS4A1P11836 297 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 KCNJ4P48050 445 aa13.78□□□□□ -0.2
SYNPO2-201ENST00000307142 PSME1Q06323 249 aa13.77□□□□□ -0.21
SYNPO2-201ENST00000307142 FGD1P98174 961 aa13.77□□□□□ -0.21
SYNPO2-201ENST00000307142 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
SYNPO2-201ENST00000307142 CHMP3Q9Y3E7 222 aa13.75□□□□□ -0.21
SYNPO2-201ENST00000307142 IGF1RP08069 1367 aa13.74□□□□□ -0.21
SYNPO2-201ENST00000307142 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
SYNPO2-201ENST00000307142 NCLP19338 710 aaKnown RBP13.74□□□□□ -0.21
SYNPO2-201ENST00000307142 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
SYNPO2-201ENST00000307142 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYNPO2-201ENST00000307142 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
SYNPO2-201ENST00000307142 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
SYNPO2-201ENST00000307142 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
SYNPO2-201ENST00000307142 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
SYNPO2-201ENST00000307142 BECN1Q14457 450 aa13.71□□□□□ -0.21
SYNPO2-201ENST00000307142 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
SYNPO2-201ENST00000307142 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
SYNPO2-201ENST00000307142 EIF5BO60841 1220 aaKnown RBP13.7□□□□□ -0.22
SYNPO2-201ENST00000307142 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
SYNPO2-201ENST00000307142 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 COG3Q96JB2 828 aa13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
SYNPO2-201ENST00000307142 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 APBB1O00213 710 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 EVC2Q86UK5 1308 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 CFTRP13569 1480 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
SYNPO2-201ENST00000307142 RGS3P49796 1198 aa13.67□□□□□ -0.22
SYNPO2-201ENST00000307142 CUX1P39880 1505 aa13.66□□□□□ -0.22
SYNPO2-201ENST00000307142 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
SYNPO2-201ENST00000307142 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
SYNPO2-201ENST00000307142 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
SYNPO2-201ENST00000307142 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
SYNPO2-201ENST00000307142 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
SYNPO2-201ENST00000307142 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
SYNPO2-201ENST00000307142 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms