RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 GORABQ5T7V8 394 aa18.01■□□□□ 0.47
HIPK3-201ENST00000303296 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
HIPK3-201ENST00000303296 CHMP4BQ9H444 224 aaKnown RBP18■□□□□ 0.47
HIPK3-201ENST00000303296 TPM3P06753 285 aa17.99■□□□□ 0.47
HIPK3-201ENST00000303296 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
HIPK3-201ENST00000303296 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
HIPK3-201ENST00000303296 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
HIPK3-201ENST00000303296 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
HIPK3-201ENST00000303296 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
HIPK3-201ENST00000303296 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
HIPK3-201ENST00000303296 TOMM22Q9NS69 142 aa17.94■□□□□ 0.46
HIPK3-201ENST00000303296 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
HIPK3-201ENST00000303296 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
HIPK3-201ENST00000303296 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
HIPK3-201ENST00000303296 RAD21O60216 631 aa17.93■□□□□ 0.46
HIPK3-201ENST00000303296 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
HIPK3-201ENST00000303296 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
HIPK3-201ENST00000303296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.91■□□□□ 0.467e-7■■■■■ 57.2
HIPK3-201ENST00000303296 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
HIPK3-201ENST00000303296 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
HIPK3-201ENST00000303296 MS4A1P11836 297 aa17.91■□□□□ 0.46
HIPK3-201ENST00000303296 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
HIPK3-201ENST00000303296 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
HIPK3-201ENST00000303296 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.45
HIPK3-201ENST00000303296 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
HIPK3-201ENST00000303296 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
HIPK3-201ENST00000303296 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
HIPK3-201ENST00000303296 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
HIPK3-201ENST00000303296 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
HIPK3-201ENST00000303296 SLKQ9H2G2 1235 aaPredicted RBP17.87■□□□□ 0.45
HIPK3-201ENST00000303296 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
HIPK3-201ENST00000303296 MLECQ14165 292 aa17.87■□□□□ 0.45
HIPK3-201ENST00000303296 SYAP1Q96A49 352 aaPredicted RBP17.87■□□□□ 0.45
HIPK3-201ENST00000303296 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
HIPK3-201ENST00000303296 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
HIPK3-201ENST00000303296 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
HIPK3-201ENST00000303296 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
HIPK3-201ENST00000303296 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
HIPK3-201ENST00000303296 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.45
HIPK3-201ENST00000303296 ABCC9O60706 1549 aa17.83■□□□□ 0.44
HIPK3-201ENST00000303296 PCMTD1Q96MG8 357 aaPredicted RBP17.82■□□□□ 0.44
HIPK3-201ENST00000303296 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
HIPK3-201ENST00000303296 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
HIPK3-201ENST00000303296 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
HIPK3-201ENST00000303296 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
HIPK3-201ENST00000303296 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
HIPK3-201ENST00000303296 MSH5O43196 834 aa17.79■□□□□ 0.44
HIPK3-201ENST00000303296 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
HIPK3-201ENST00000303296 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
HIPK3-201ENST00000303296 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
HIPK3-201ENST00000303296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.77■□□□□ 0.44
HIPK3-201ENST00000303296 TPM2P07951 284 aa17.77■□□□□ 0.44
HIPK3-201ENST00000303296 CCDC70Q6NSX1 233 aa17.77■□□□□ 0.44
HIPK3-201ENST00000303296 ZNF771Q7L3S4 317 aaPredicted RBP17.77■□□□□ 0.44
HIPK3-201ENST00000303296 ZNF592Q92610 1267 aa17.76■□□□□ 0.43
HIPK3-201ENST00000303296 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
HIPK3-201ENST00000303296 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
HIPK3-201ENST00000303296 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
HIPK3-201ENST00000303296 APPP05067 770 aa17.75■□□□□ 0.43
HIPK3-201ENST00000303296 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
HIPK3-201ENST00000303296 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
HIPK3-201ENST00000303296 STK26Q9P289 416 aa17.74■□□□□ 0.43
HIPK3-201ENST00000303296 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
HIPK3-201ENST00000303296 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
HIPK3-201ENST00000303296 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
HIPK3-201ENST00000303296 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
HIPK3-201ENST00000303296 PAF1Q8N7H5 531 aa17.72■□□□□ 0.43
HIPK3-201ENST00000303296 H3BQV1 296 aa17.72■□□□□ 0.43
HIPK3-201ENST00000303296 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
HIPK3-201ENST00000303296 SLC4A10Q6U841 1118 aa17.72■□□□□ 0.43
HIPK3-201ENST00000303296 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
HIPK3-201ENST00000303296 ODF2Q5BJF6 829 aa17.71■□□□□ 0.43
HIPK3-201ENST00000303296 FBXW7Q969H0 707 aa17.71■□□□□ 0.43
HIPK3-201ENST00000303296 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 MAP7D2Q96T17 732 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 TPM1P09493 284 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 ZFYVE27Q5T4F4 411 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
HIPK3-201ENST00000303296 AKAP17AQ02040 695 aaKnown RBP17.69■□□□□ 0.42
HIPK3-201ENST00000303296 GPS2Q13227 327 aa17.69■□□□□ 0.42
HIPK3-201ENST00000303296 GOLGA6L19H0YKK7 550 aa17.69■□□□□ 0.42
HIPK3-201ENST00000303296 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
HIPK3-201ENST00000303296 NAP1L1P55209 391 aaKnown RBP17.67■□□□□ 0.42
HIPK3-201ENST00000303296 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
HIPK3-201ENST00000303296 SKIDA1Q1XH10 827 aa17.67■□□□□ 0.42
HIPK3-201ENST00000303296 HSP90AA2PQ14568 343 aaPredicted RBP17.66■□□□□ 0.42
HIPK3-201ENST00000303296 PHF14O94880 888 aa17.66■□□□□ 0.42
HIPK3-201ENST00000303296 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
HIPK3-201ENST00000303296 CCDC43Q96MW1 224 aaKnown RBP17.65■□□□□ 0.42
HIPK3-201ENST00000303296 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.42
HIPK3-201ENST00000303296 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
HIPK3-201ENST00000303296 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
HIPK3-201ENST00000303296 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
HIPK3-201ENST00000303296 BECN2A8MW95 431 aa17.62■□□□□ 0.41
HIPK3-201ENST00000303296 RUFY1Q96T51 708 aa17.62■□□□□ 0.41
HIPK3-201ENST00000303296 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
HIPK3-201ENST00000303296 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
HIPK3-201ENST00000303296 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
HIPK3-201ENST00000303296 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms