RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PATL2C9JE40 543 aaKnown RBP15.74■□□□□ 0.11
ABCA3-201ENST00000301732 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
ABCA3-201ENST00000301732 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
ABCA3-201ENST00000301732 PRM3Q9NNZ6 103 aa15.73■□□□□ 0.11
ABCA3-201ENST00000301732 NRDCO43847 1150 aa15.72■□□□□ 0.11
ABCA3-201ENST00000301732 CCDC9Q9Y3X0 531 aaKnown RBP15.72■□□□□ 0.11
ABCA3-201ENST00000301732 WWC1Q8IX03 1113 aa15.71■□□□□ 0.11
ABCA3-201ENST00000301732 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
ABCA3-201ENST00000301732 CLIP1P30622 1438 aa15.71■□□□□ 0.11
ABCA3-201ENST00000301732 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
ABCA3-201ENST00000301732 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
ABCA3-201ENST00000301732 STK26Q9P289 416 aa15.69■□□□□ 0.1
ABCA3-201ENST00000301732 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
ABCA3-201ENST00000301732 CHMP7Q8WUX9 453 aaPredicted RBP15.68■□□□□ 0.1
ABCA3-201ENST00000301732 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
ABCA3-201ENST00000301732 MLECQ14165 292 aa15.68■□□□□ 0.1
ABCA3-201ENST00000301732 KIAA2012Q0VF49 1180 aa15.68■□□□□ 0.1
ABCA3-201ENST00000301732 GOLGA6L3A6NEY3 463 aa15.67■□□□□ 0.1
ABCA3-201ENST00000301732 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
ABCA3-201ENST00000301732 A0A0U1RQG5 324 aaPredicted RBP15.65■□□□□ 0.1
ABCA3-201ENST00000301732 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
ABCA3-201ENST00000301732 HSP90AA2PQ14568 343 aaPredicted RBP15.64■□□□□ 0.09
ABCA3-201ENST00000301732 TRIM6-TRIM34B2RNG4 842 aa15.63■□□□□ 0.09
ABCA3-201ENST00000301732 MCCP23508 829 aa15.63■□□□□ 0.09
ABCA3-201ENST00000301732 CCAR2Q8N163 923 aaKnown RBP15.63■□□□□ 0.09
ABCA3-201ENST00000301732 HSPA5P11021 654 aaKnown RBP15.62■□□□□ 0.09
ABCA3-201ENST00000301732 PLIN1O60240 522 aa15.62■□□□□ 0.09
ABCA3-201ENST00000301732 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
ABCA3-201ENST00000301732 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
ABCA3-201ENST00000301732 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
ABCA3-201ENST00000301732 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
ABCA3-201ENST00000301732 GBP4Q96PP9 640 aa15.6■□□□□ 0.09
ABCA3-201ENST00000301732 PTMSP20962 102 aa15.59■□□□□ 0.09
ABCA3-201ENST00000301732 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
ABCA3-201ENST00000301732 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
ABCA3-201ENST00000301732 SLC4A10Q6U841 1118 aa15.59■□□□□ 0.09
ABCA3-201ENST00000301732 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.09
ABCA3-201ENST00000301732 ZNF592Q92610 1267 aa15.58■□□□□ 0.08
ABCA3-201ENST00000301732 IPO9Q96P70 1041 aaKnown RBP15.58■□□□□ 0.08
ABCA3-201ENST00000301732 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
ABCA3-201ENST00000301732 PES1O00541 588 aaKnown RBP15.57■□□□□ 0.08
ABCA3-201ENST00000301732 FBXW7Q969H0 707 aa15.57■□□□□ 0.08
ABCA3-201ENST00000301732 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
ABCA3-201ENST00000301732 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
ABCA3-201ENST00000301732 U2AF1L5P0DN76 240 aaPredicted RBP15.55■□□□□ 0.08
ABCA3-201ENST00000301732 U2AF1Q01081 240 aaKnown RBP eCLIP15.55■□□□□ 0.08
ABCA3-201ENST00000301732 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
ABCA3-201ENST00000301732 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
ABCA3-201ENST00000301732 CALD1Q05682 793 aaKnown RBP15.53■□□□□ 0.08
ABCA3-201ENST00000301732 FAM13BQ9NYF5 915 aa15.53■□□□□ 0.08
ABCA3-201ENST00000301732 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
ABCA3-201ENST00000301732 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
ABCA3-201ENST00000301732 ELL2O00472 640 aaPredicted RBP15.52■□□□□ 0.07
ABCA3-201ENST00000301732 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.07
ABCA3-201ENST00000301732 TMF1P82094 1093 aa15.51■□□□□ 0.07
ABCA3-201ENST00000301732 ZNF771Q7L3S4 317 aaPredicted RBP15.5■□□□□ 0.07
ABCA3-201ENST00000301732 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
ABCA3-201ENST00000301732 GOLGA6L1Q8N7Z2 621 aa15.49■□□□□ 0.07
ABCA3-201ENST00000301732 SMC4Q9NTJ3 1288 aa15.49■□□□□ 0.07
ABCA3-201ENST00000301732 FOSBP53539 338 aa15.48■□□□□ 0.07
ABCA3-201ENST00000301732 VPS53Q5VIR6 699 aa15.48■□□□□ 0.07
ABCA3-201ENST00000301732 DHX37Q8IY37 1157 aaKnown RBP15.48■□□□□ 0.07
ABCA3-201ENST00000301732 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
ABCA3-201ENST00000301732 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
ABCA3-201ENST00000301732 MS4A1P11836 297 aa15.46■□□□□ 0.07
ABCA3-201ENST00000301732 GORABQ5T7V8 394 aa15.46■□□□□ 0.07
ABCA3-201ENST00000301732 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
ABCA3-201ENST00000301732 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
ABCA3-201ENST00000301732 RWDD1Q9H446 243 aaPredicted RBP15.45■□□□□ 0.06
ABCA3-201ENST00000301732 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
ABCA3-201ENST00000301732 KDM4AO75164 1064 aa15.43■□□□□ 0.06
ABCA3-201ENST00000301732 DDX49Q9Y6V7 483 aaKnown RBP15.43■□□□□ 0.06
ABCA3-201ENST00000301732 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
ABCA3-201ENST00000301732 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
ABCA3-201ENST00000301732 EXOC6Q8TAG9 804 aa15.41■□□□□ 0.06
ABCA3-201ENST00000301732 SYAP1Q96A49 352 aaPredicted RBP15.41■□□□□ 0.06
ABCA3-201ENST00000301732 GGT6Q6P531 493 aa15.41■□□□□ 0.06
ABCA3-201ENST00000301732 NECTIN2Q92692 538 aa15.41■□□□□ 0.06
ABCA3-201ENST00000301732 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
ABCA3-201ENST00000301732 GSE1Q14687 1217 aa15.4■□□□□ 0.06
ABCA3-201ENST00000301732 NGEFQ8N5V2 710 aa15.4■□□□□ 0.06
ABCA3-201ENST00000301732 SF3A1Q15459 793 aaKnown RBP15.39■□□□□ 0.05
ABCA3-201ENST00000301732 TPM4P67936 248 aa15.39■□□□□ 0.05
ABCA3-201ENST00000301732 SKIDA1Q1XH10 827 aa15.39■□□□□ 0.05
ABCA3-201ENST00000301732 RAD21O60216 631 aa15.39■□□□□ 0.05
ABCA3-201ENST00000301732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.39■□□□□ 0.05
ABCA3-201ENST00000301732 MCTP1Q6DN14 999 aa15.39■□□□□ 0.05
ABCA3-201ENST00000301732 KTN1Q86UP2 1357 aaKnown RBP15.38■□□□□ 0.05
ABCA3-201ENST00000301732 PDE4AP27815 886 aa15.37■□□□□ 0.05
ABCA3-201ENST00000301732 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
ABCA3-201ENST00000301732 MPNDQ8N594 471 aa15.37■□□□□ 0.05
ABCA3-201ENST00000301732 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
ABCA3-201ENST00000301732 PKD2Q13563 968 aa15.36■□□□□ 0.05
ABCA3-201ENST00000301732 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
ABCA3-201ENST00000301732 TPD52L1Q16890 204 aaPredicted RBP15.35■□□□□ 0.05
ABCA3-201ENST00000301732 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
ABCA3-201ENST00000301732 TPM3P06753 285 aa15.35■□□□□ 0.05
ABCA3-201ENST00000301732 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
ABCA3-201ENST00000301732 H3BQV1 296 aa15.34■□□□□ 0.05
ABCA3-201ENST00000301732 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 288.2 ms