RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZBED9Q6R2W3 1325 aa26.41■■□□□ 1.82
TRA2A-201ENST00000297071 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
TRA2A-201ENST00000297071 MPHOSPH9Q99550 1183 aa26.4■■□□□ 1.82
TRA2A-201ENST00000297071 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.82
TRA2A-201ENST00000297071 ADAMTS12P58397 1594 aa26.39■■□□□ 1.81
TRA2A-201ENST00000297071 ANKRD30BQ9BXX2 1392 aa26.39■■□□□ 1.81
TRA2A-201ENST00000297071 MSH5O43196 834 aa26.38■■□□□ 1.81
TRA2A-201ENST00000297071 PRKRIP1Q9H875 184 aaPredicted RBP26.38■■□□□ 1.81
TRA2A-201ENST00000297071 MYT1LQ9UL68 1186 aa26.38■■□□□ 1.81
TRA2A-201ENST00000297071 BCL11AQ9H165 835 aa26.37■■□□□ 1.81
TRA2A-201ENST00000297071 RRP7BPQ9NSQ0 103 aa26.35■■□□□ 1.81
TRA2A-201ENST00000297071 DAPK1P53355 1430 aa26.33■■□□□ 1.81
TRA2A-201ENST00000297071 L3MBTL2Q969R5 705 aa26.32■■□□□ 1.8
TRA2A-201ENST00000297071 ADGBQ8N7X0 1667 aa26.32■■□□□ 1.8
TRA2A-201ENST00000297071 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
TRA2A-201ENST00000297071 MBD5Q9P267 1494 aa26.25■■□□□ 1.79
TRA2A-201ENST00000297071 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
TRA2A-201ENST00000297071 ABCC5O15440 1437 aa26.24■■□□□ 1.79
TRA2A-201ENST00000297071 SMG6Q86US8 1419 aaKnown RBP26.24■■□□□ 1.79
TRA2A-201ENST00000297071 ARID4BQ4LE39 1312 aaPredicted RBP26.23■■□□□ 1.79
TRA2A-201ENST00000297071 CHIC2Q9UKJ5 165 aa26.22■■□□□ 1.79
TRA2A-201ENST00000297071 KIF14Q15058 1648 aa26.22■■□□□ 1.79
TRA2A-201ENST00000297071 C11orf95C9JLR9 678 aaPredicted RBP26.21■■□□□ 1.79
TRA2A-201ENST00000297071 CROCC2H7BZ55 1655 aa26.21■■□□□ 1.79
TRA2A-201ENST00000297071 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
TRA2A-201ENST00000297071 MRS2Q9HD23 443 aa26.21■■□□□ 1.79
TRA2A-201ENST00000297071 CCDC184Q52MB2 194 aa26.2■■□□□ 1.78
TRA2A-201ENST00000297071 KIAA0556O60303 1618 aa26.2■■□□□ 1.78
TRA2A-201ENST00000297071 KIF7Q2M1P5 1343 aa26.19■■□□□ 1.78
TRA2A-201ENST00000297071 RAPGEF6Q8TEU7 1601 aa26.19■■□□□ 1.78
TRA2A-201ENST00000297071 ADCY10Q96PN6 1610 aa26.19■■□□□ 1.78
TRA2A-201ENST00000297071 ERICH6Q7L0X2 663 aa26.18■■□□□ 1.78
TRA2A-201ENST00000297071 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
TRA2A-201ENST00000297071 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
TRA2A-201ENST00000297071 NBPF8Q3BBV2 869 aa26.17■■□□□ 1.78
TRA2A-201ENST00000297071 PZPP20742 1482 aa26.15■■□□□ 1.78
TRA2A-201ENST00000297071 IRX6P78412 446 aaPredicted RBP26.15■■□□□ 1.78
TRA2A-201ENST00000297071 KDM5CP41229 1560 aa26.13■■□□□ 1.77
TRA2A-201ENST00000297071 DHX29Q7Z478 1369 aaKnown RBP26.13■■□□□ 1.77
TRA2A-201ENST00000297071 BCORL1Q5H9F3 1711 aa26.12■■□□□ 1.77
TRA2A-201ENST00000297071 KIAA0586Q9BVV6 1533 aa26.12■■□□□ 1.77
TRA2A-201ENST00000297071 NUP153P49790 1475 aaKnown RBP26.09■■□□□ 1.77
TRA2A-201ENST00000297071 ROCK2O75116 1388 aaKnown RBP26.09■■□□□ 1.77
TRA2A-201ENST00000297071 FAM9BQ8IZU0 186 aa26.09■■□□□ 1.77
TRA2A-201ENST00000297071 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
TRA2A-201ENST00000297071 UHRF1BP1Q6BDS2 1440 aa26.09■■□□□ 1.77
TRA2A-201ENST00000297071 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.77
TRA2A-201ENST00000297071 ARHGEF12Q9NZN5 1544 aa26.05■■□□□ 1.76
TRA2A-201ENST00000297071 NUDCQ9Y266 331 aa26.04■■□□□ 1.76
TRA2A-201ENST00000297071 SLC4A1APQ9BWU0 796 aaKnown RBP26.04■■□□□ 1.76
TRA2A-201ENST00000297071 KTN1Q86UP2 1357 aaKnown RBP26.04■■□□□ 1.76
TRA2A-201ENST00000297071 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
TRA2A-201ENST00000297071 TROQ12816 1431 aaPredicted RBP26.03■■□□□ 1.76
TRA2A-201ENST00000297071 RALGAPBQ86X10 1494 aa26.02■■□□□ 1.76
TRA2A-201ENST00000297071 OSCARQ8IYS5 282 aa26.02■■□□□ 1.76
TRA2A-201ENST00000297071 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
TRA2A-201ENST00000297071 KDM5DQ9BY66 1539 aa26■■□□□ 1.75
TRA2A-201ENST00000297071 E9PCH4 1651 aa26■■□□□ 1.75
TRA2A-201ENST00000297071 FOXD1Q16676 465 aa26■■□□□ 1.75
TRA2A-201ENST00000297071 B4GALNT3Q6L9W6 998 aa26■■□□□ 1.75
TRA2A-201ENST00000297071 USP47Q96K76 1375 aa25.98■■□□□ 1.75
TRA2A-201ENST00000297071 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
TRA2A-201ENST00000297071 SHANK2Q9UPX8 1470 aa25.96■■□□□ 1.75
TRA2A-201ENST00000297071 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
TRA2A-201ENST00000297071 LRPPRCP42704 1394 aaKnown RBP25.91■■□□□ 1.74
TRA2A-201ENST00000297071 NOP58Q9Y2X3 529 aaKnown RBP25.91■■□□□ 1.74
TRA2A-201ENST00000297071 ANKRD30AQ9BXX3 1397 aa25.9■■□□□ 1.74
TRA2A-201ENST00000297071 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.73
TRA2A-201ENST00000297071 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
TRA2A-201ENST00000297071 KIF15Q9NS87 1388 aa25.88■■□□□ 1.73
TRA2A-201ENST00000297071 CEP170Q5SW79 1584 aa25.88■■□□□ 1.73
TRA2A-201ENST00000297071 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
TRA2A-201ENST00000297071 PNISRQ8TF01 805 aaKnown RBP25.87■■□□□ 1.73
TRA2A-201ENST00000297071 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
TRA2A-201ENST00000297071 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.73
TRA2A-201ENST00000297071 INSRP06213 1382 aa25.82■■□□□ 1.72
TRA2A-201ENST00000297071 ANKRD50Q9ULJ7 1429 aa25.82■■□□□ 1.72
TRA2A-201ENST00000297071 CCDC136Q96JN2 1154 aa25.81■■□□□ 1.72
TRA2A-201ENST00000297071 PTPRGP23470 1445 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
TRA2A-201ENST00000297071 RALBP1Q15311 655 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
TRA2A-201ENST00000297071 RIMBP3CA6NJZ7 1639 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 RIMBP3BA6NNM3 1639 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 LAMC1P11047 1609 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 RIMBP3Q9UFD9 1639 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 ARHGEF5Q12774 1597 aa25.8■■□□□ 1.72
TRA2A-201ENST00000297071 IPO9Q96P70 1041 aaKnown RBP25.77■■□□□ 1.72
TRA2A-201ENST00000297071 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
TRA2A-201ENST00000297071 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
TRA2A-201ENST00000297071 ANP32AP39687 249 aaKnown RBP25.77■■□□□ 1.72
TRA2A-201ENST00000297071 PKD2Q13563 968 aa25.77■■□□□ 1.72
TRA2A-201ENST00000297071 MYBBP1AQ9BQG0 1328 aaKnown RBP25.76■■□□□ 1.71
TRA2A-201ENST00000297071 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
TRA2A-201ENST00000297071 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
TRA2A-201ENST00000297071 DEKP35659 375 aaKnown RBP25.74■■□□□ 1.71
TRA2A-201ENST00000297071 TMC1Q8TDI8 760 aa25.74■■□□□ 1.71
TRA2A-201ENST00000297071 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
TRA2A-201ENST00000297071 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
TRA2A-201ENST00000297071 ABCA8O94911 1581 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms