RNA–Protein interactions for RNA: ENST00000280704.8

LDHC-201, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 1,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-201ENST00000280704 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
LDHC-201ENST00000280704 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
LDHC-201ENST00000280704 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
LDHC-201ENST00000280704 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
LDHC-201ENST00000280704 RNF166Q96A37 237 aaPredicted RBP12.08□□□□□ -0.48
LDHC-201ENST00000280704 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
LDHC-201ENST00000280704 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
LDHC-201ENST00000280704 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
LDHC-201ENST00000280704 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
LDHC-201ENST00000280704 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
LDHC-201ENST00000280704 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
LDHC-201ENST00000280704 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
LDHC-201ENST00000280704 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
LDHC-201ENST00000280704 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LDHC-201ENST00000280704 SOX12O15370 315 aa11.94□□□□□ -0.5
LDHC-201ENST00000280704 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
LDHC-201ENST00000280704 ARSIQ5FYB1 569 aa11.92□□□□□ -0.5
LDHC-201ENST00000280704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.91□□□□□ -0.5
LDHC-201ENST00000280704 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.5
LDHC-201ENST00000280704 ZFP91Q96JP5 570 aaPredicted RBP11.91□□□□□ -0.5
LDHC-201ENST00000280704 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
LDHC-201ENST00000280704 MYO15BQ96JP2 1530 aa11.88□□□□□ -0.51
LDHC-201ENST00000280704 PTGER2P43116 358 aa11.86□□□□□ -0.51
LDHC-201ENST00000280704 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
LDHC-201ENST00000280704 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
LDHC-201ENST00000280704 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
LDHC-201ENST00000280704 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.52
LDHC-201ENST00000280704 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
LDHC-201ENST00000280704 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
LDHC-201ENST00000280704 POTEEQ6S8J3 1075 aa11.78□□□□□ -0.52
LDHC-201ENST00000280704 KIF3CO14782 793 aa11.76□□□□□ -0.53
LDHC-201ENST00000280704 NLRP6P59044 892 aa11.75□□□□□ -0.53
LDHC-201ENST00000280704 NUDT7P0C024 238 aa11.73□□□□□ -0.53
LDHC-201ENST00000280704 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
LDHC-201ENST00000280704 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
LDHC-201ENST00000280704 SCRIBQ14160 1630 aa11.71□□□□□ -0.53
LDHC-201ENST00000280704 BCL11BQ9C0K0 894 aaPredicted RBP11.71□□□□□ -0.53
LDHC-201ENST00000280704 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
LDHC-201ENST00000280704 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
LDHC-201ENST00000280704 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
LDHC-201ENST00000280704 PBX2P40425 430 aa11.68□□□□□ -0.54
LDHC-201ENST00000280704 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
LDHC-201ENST00000280704 NESP48681 1621 aa11.64□□□□□ -0.55
LDHC-201ENST00000280704 SLC34A2O95436 690 aa11.64□□□□□ -0.55
LDHC-201ENST00000280704 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
LDHC-201ENST00000280704 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
LDHC-201ENST00000280704 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
LDHC-201ENST00000280704 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
LDHC-201ENST00000280704 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
LDHC-201ENST00000280704 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
LDHC-201ENST00000280704 ADGRD1Q6QNK2 874 aa11.58□□□□□ -0.56
LDHC-201ENST00000280704 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
LDHC-201ENST00000280704 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
LDHC-201ENST00000280704 STK25O00506 426 aa11.56□□□□□ -0.56
LDHC-201ENST00000280704 ARHGAP33O14559 1287 aa11.54□□□□□ -0.56
LDHC-201ENST00000280704 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
LDHC-201ENST00000280704 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
LDHC-201ENST00000280704 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
LDHC-201ENST00000280704 HRO43593 1189 aa11.51□□□□□ -0.57
LDHC-201ENST00000280704 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
LDHC-201ENST00000280704 PPP1R37O75864 691 aa11.5□□□□□ -0.57
LDHC-201ENST00000280704 PSEN2P49810 448 aa11.49□□□□□ -0.57
LDHC-201ENST00000280704 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
LDHC-201ENST00000280704 NCAPD3P42695 1498 aa11.48□□□□□ -0.57
LDHC-201ENST00000280704 TK2O00142 265 aa11.47□□□□□ -0.57
LDHC-201ENST00000280704 ARHGEF11O15085 1522 aa11.46□□□□□ -0.57
LDHC-201ENST00000280704 PSDA5PKW4 1024 aaPredicted RBP11.46□□□□□ -0.57
LDHC-201ENST00000280704 PTCD2Q8WV60 388 aaKnown RBP11.46□□□□□ -0.57
LDHC-201ENST00000280704 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
LDHC-201ENST00000280704 RGL2O15211 777 aa11.42□□□□□ -0.58
LDHC-201ENST00000280704 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
LDHC-201ENST00000280704 KCTD12Q96CX2 325 aaKnown RBP11.41□□□□□ -0.58
LDHC-201ENST00000280704 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
LDHC-201ENST00000280704 FOXK1P85037 733 aa11.37□□□□□ -0.59
LDHC-201ENST00000280704 PLPP6Q8IY26 295 aa11.37□□□□□ -0.59
LDHC-201ENST00000280704 PKD2Q13563 968 aa11.36□□□□□ -0.59
LDHC-201ENST00000280704 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
LDHC-201ENST00000280704 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
LDHC-201ENST00000280704 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
LDHC-201ENST00000280704 DSG2Q14126 1118 aa11.33□□□□□ -0.6
LDHC-201ENST00000280704 KCNK17Q96T54 332 aa11.33□□□□□ -0.6
LDHC-201ENST00000280704 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
LDHC-201ENST00000280704 WDR62O43379 1518 aa11.31□□□□□ -0.6
LDHC-201ENST00000280704 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
LDHC-201ENST00000280704 MRC2Q9UBG0 1479 aa11.31□□□□□ -0.6
LDHC-201ENST00000280704 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
LDHC-201ENST00000280704 ARAP1Q96P48 1450 aa11.28□□□□□ -0.6
LDHC-201ENST00000280704 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
LDHC-201ENST00000280704 PTPN5P54829 565 aa11.27□□□□□ -0.61
LDHC-201ENST00000280704 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
LDHC-201ENST00000280704 TBC1D12O60347 775 aa11.24□□□□□ -0.61
LDHC-201ENST00000280704 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
LDHC-201ENST00000280704 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
LDHC-201ENST00000280704 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
LDHC-201ENST00000280704 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
LDHC-201ENST00000280704 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
LDHC-201ENST00000280704 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
LDHC-201ENST00000280704 RGS20O76081 388 aa11.2□□□□□ -0.62
LDHC-201ENST00000280704 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
LDHC-201ENST00000280704 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms