RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 TCERG1O14776 1098 aaKnown RBP28.51■■■□□ 2.15
CRIM1-201ENST00000280527 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
CRIM1-201ENST00000280527 GNL2Q13823 731 aaKnown RBP28.5■■■□□ 2.15
CRIM1-201ENST00000280527 NOC3LQ8WTT2 800 aaKnown RBP28.48■■■□□ 2.15
CRIM1-201ENST00000280527 MFAP1P55081 439 aaKnown RBP28.47■■■□□ 2.15
CRIM1-201ENST00000280527 FOXD4L1Q9NU39 408 aa28.47■■■□□ 2.15
CRIM1-201ENST00000280527 RCAN3Q9UKA8 241 aa28.46■■■□□ 2.15
CRIM1-201ENST00000280527 SYAP1Q96A49 352 aaPredicted RBP28.43■■■□□ 2.14
CRIM1-201ENST00000280527 SAFB2Q14151 953 aaKnown RBP eCLIP28.43■■■□□ 2.14
CRIM1-201ENST00000280527 ISY1Q9ULR0 285 aaKnown RBP28.42■■■□□ 2.14
CRIM1-201ENST00000280527 MLECQ14165 292 aa28.41■■■□□ 2.14
CRIM1-201ENST00000280527 TMF1P82094 1093 aa28.4■■■□□ 2.14
CRIM1-201ENST00000280527 KIAA1211Q6ZU35 1233 aa28.39■■■□□ 2.14
CRIM1-201ENST00000280527 CFAP44Q96MT7 982 aa28.39■■■□□ 2.14
CRIM1-201ENST00000280527 HSPA5P11021 654 aaKnown RBP28.39■■■□□ 2.13
CRIM1-201ENST00000280527 RSPH6AQ9H0K4 717 aa28.39■■■□□ 2.13
CRIM1-201ENST00000280527 GOLGA6L1Q8N7Z2 621 aa28.38■■■□□ 2.13
CRIM1-201ENST00000280527 ITPRIPQ8IWB1 547 aa28.37■■■□□ 2.13
CRIM1-201ENST00000280527 CALD1Q05682 793 aaKnown RBP28.37■■■□□ 2.13
CRIM1-201ENST00000280527 DCAF11Q8TEB1 546 aa28.36■■■□□ 2.13
CRIM1-201ENST00000280527 SRPK2P78362 688 aaKnown RBP28.35■■■□□ 2.13
CRIM1-201ENST00000280527 RWDD1Q9H446 243 aaPredicted RBP28.35■■■□□ 2.13
CRIM1-201ENST00000280527 MORC1Q86VD1 984 aa28.33■■■□□ 2.13
CRIM1-201ENST00000280527 NOL8Q76FK4 1167 aaKnown RBP28.33■■■□□ 2.12
CRIM1-201ENST00000280527 HSP90B1P14625 803 aaKnown RBP28.3■■■□□ 2.12
CRIM1-201ENST00000280527 PDE4CQ08493 712 aa28.3■■■□□ 2.12
CRIM1-201ENST00000280527 A0A0U1RQG5 324 aaPredicted RBP28.29■■■□□ 2.12
CRIM1-201ENST00000280527 TPM4P67936 248 aa28.28■■■□□ 2.12
CRIM1-201ENST00000280527 FOXD4L5Q5VV16 416 aaPredicted RBP28.28■■■□□ 2.12
CRIM1-201ENST00000280527 FOXD4L4Q8WXT5 416 aaPredicted RBP28.28■■■□□ 2.12
CRIM1-201ENST00000280527 SLC4A3P48751 1232 aa28.28■■■□□ 2.12
CRIM1-201ENST00000280527 TIMELESSQ9UNS1 1208 aa28.27■■■□□ 2.12
CRIM1-201ENST00000280527 HTATSF1O43719 755 aaKnown RBP28.27■■■□□ 2.12
CRIM1-201ENST00000280527 IPO8O15397 1037 aaKnown RBP28.26■■■□□ 2.11
CRIM1-201ENST00000280527 KTN1Q86UP2 1357 aaKnown RBP28.24■■■□□ 2.11
CRIM1-201ENST00000280527 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
CRIM1-201ENST00000280527 STK26Q9P289 416 aa28.22■■■□□ 2.11
CRIM1-201ENST00000280527 ZNF330Q9Y3S2 320 aaPredicted RBP28.22■■■□□ 2.11
CRIM1-201ENST00000280527 GSE1Q14687 1217 aa28.21■■■□□ 2.11
CRIM1-201ENST00000280527 RTF1Q92541 710 aaKnown RBP28.21■■■□□ 2.11
CRIM1-201ENST00000280527 PMFBP1Q8TBY8 1022 aa28.2■■■□□ 2.11
CRIM1-201ENST00000280527 TNIKQ9UKE5 1360 aa28.2■■■□□ 2.1
CRIM1-201ENST00000280527 CREBRFQ8IUR6 639 aa28.19■■■□□ 2.1
CRIM1-201ENST00000280527 EEA1Q15075 1411 aa28.17■■■□□ 2.1
CRIM1-201ENST00000280527 ZNF771Q7L3S4 317 aaPredicted RBP28.16■■■□□ 2.1
CRIM1-201ENST00000280527 CCNB3Q8WWL7 1395 aa28.16■■■□□ 2.1
CRIM1-201ENST00000280527 TRIM6-TRIM34B2RNG4 842 aa28.16■■■□□ 2.1
CRIM1-201ENST00000280527 CLUAP1Q96AJ1 413 aa28.15■■■□□ 2.1
CRIM1-201ENST00000280527 USP35Q9P2H5 1018 aa28.14■■■□□ 2.09
CRIM1-201ENST00000280527 PAK3O75914 559 aaPredicted RBP28.13■■■□□ 2.09
CRIM1-201ENST00000280527 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
CRIM1-201ENST00000280527 DDX11L8A8MPP1 907 aa28.12■■■□□ 2.09
CRIM1-201ENST00000280527 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
CRIM1-201ENST00000280527 U2AF1L5P0DN76 240 aaPredicted RBP28.11■■■□□ 2.09
CRIM1-201ENST00000280527 U2AF1Q01081 240 aaKnown RBP eCLIP28.11■■■□□ 2.09
CRIM1-201ENST00000280527 KANK1Q14678 1352 aa28.11■■■□□ 2.09
CRIM1-201ENST00000280527 SETQ01105 290 aaPredicted RBP28.11■■■□□ 2.09
CRIM1-201ENST00000280527 CSPP1Q1MSJ5 1256 aa28.1■■■□□ 2.09
CRIM1-201ENST00000280527 PHF14O94880 888 aa28.1■■■□□ 2.09
CRIM1-201ENST00000280527 FOXD1Q16676 465 aa28.09■■■□□ 2.09
CRIM1-201ENST00000280527 GGT6Q6P531 493 aa28.09■■■□□ 2.09
CRIM1-201ENST00000280527 CCAR2Q8N163 923 aaKnown RBP28.08■■■□□ 2.09
CRIM1-201ENST00000280527 SMC4Q9NTJ3 1288 aa28.08■■■□□ 2.09
CRIM1-201ENST00000280527 DDX49Q9Y6V7 483 aaKnown RBP28.07■■■□□ 2.08
CRIM1-201ENST00000280527 FOXD4L6Q3SYB3 417 aaPredicted RBP28.06■■■□□ 2.08
CRIM1-201ENST00000280527 FOXD4L3Q6VB84 417 aaPredicted RBP28.06■■■□□ 2.08
CRIM1-201ENST00000280527 FAM13BQ9NYF5 915 aa28.06■■■□□ 2.08
CRIM1-201ENST00000280527 HDGFP51858 240 aaKnown RBP28.06■■■□□ 2.08
CRIM1-201ENST00000280527 TPM3P06753 285 aa28.05■■■□□ 2.08
CRIM1-201ENST00000280527 CSB-PGBD3P0DP91 1061 aa28.05■■■□□ 2.08
CRIM1-201ENST00000280527 PDE4AP27815 886 aa28.04■■■□□ 2.08
CRIM1-201ENST00000280527 CCDC146Q8IYE0 955 aa28.04■■■□□ 2.08
CRIM1-201ENST00000280527 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
CRIM1-201ENST00000280527 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
CRIM1-201ENST00000280527 PATL2C9JE40 543 aaKnown RBP28.03■■■□□ 2.08
CRIM1-201ENST00000280527 RALBP1Q15311 655 aa28.02■■■□□ 2.08
CRIM1-201ENST00000280527 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
CRIM1-201ENST00000280527 ZNF592Q92610 1267 aa28.01■■■□□ 2.08
CRIM1-201ENST00000280527 ST18O60284 1047 aa28■■■□□ 2.07
CRIM1-201ENST00000280527 HDGFL2Q7Z4V5 671 aaPredicted RBP28■■■□□ 2.07
CRIM1-201ENST00000280527 RASSF8Q8NHQ8 419 aa28■■■□□ 2.07
CRIM1-201ENST00000280527 SETD5Q9C0A6 1442 aa27.99■■■□□ 2.07
CRIM1-201ENST00000280527 CHMP3Q9Y3E7 222 aa27.96■■■□□ 2.07
CRIM1-201ENST00000280527 CCDC34Q96HJ3 373 aa27.96■■■□□ 2.07
CRIM1-201ENST00000280527 PRM3Q9NNZ6 103 aa27.96■■■□□ 2.07
CRIM1-201ENST00000280527 ANO8Q9HCE9 1232 aaPredicted RBP27.96■■■□□ 2.07
CRIM1-201ENST00000280527 KIF16BQ96L93 1317 aa27.95■■■□□ 2.06
CRIM1-201ENST00000280527 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
CRIM1-201ENST00000280527 CENPJQ9HC77 1338 aaPredicted RBP27.94■■■□□ 2.06
CRIM1-201ENST00000280527 SLC4A10Q6U841 1118 aa27.94■■■□□ 2.06
CRIM1-201ENST00000280527 FAM161AQ3B820 660 aa27.94■■■□□ 2.06
CRIM1-201ENST00000280527 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
CRIM1-201ENST00000280527 PES1O00541 588 aaKnown RBP27.93■■■□□ 2.06
CRIM1-201ENST00000280527 SF3A1Q15459 793 aaKnown RBP27.93■■■□□ 2.06
CRIM1-201ENST00000280527 PKD2Q13563 968 aa27.92■■■□□ 2.06
CRIM1-201ENST00000280527 GPATCH3Q96I76 525 aa27.92■■■□□ 2.06
CRIM1-201ENST00000280527 PLIN1O60240 522 aa27.91■■■□□ 2.06
CRIM1-201ENST00000280527 GORABQ5T7V8 394 aa27.91■■■□□ 2.06
CRIM1-201ENST00000280527 ROCK2O75116 1388 aaKnown RBP27.9■■■□□ 2.06
CRIM1-201ENST00000280527 SKOR2Q2VWA4 1001 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms