RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 DAPK1P53355 1430 aa18.05■□□□□ 0.48
SDE2-201ENST00000272091 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
SDE2-201ENST00000272091 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
SDE2-201ENST00000272091 ABCC5O15440 1437 aa18.04■□□□□ 0.48
SDE2-201ENST00000272091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
SDE2-201ENST00000272091 KDM6BO15054 1643 aa18.03■□□□□ 0.48
SDE2-201ENST00000272091 AKNAQ7Z591 1439 aa18.01■□□□□ 0.47
SDE2-201ENST00000272091 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
SDE2-201ENST00000272091 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
SDE2-201ENST00000272091 SAMD9LQ8IVG5 1584 aa17.98■□□□□ 0.47
SDE2-201ENST00000272091 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
SDE2-201ENST00000272091 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
SDE2-201ENST00000272091 MYO5CQ9NQX4 1742 aa17.97■□□□□ 0.47
SDE2-201ENST00000272091 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
SDE2-201ENST00000272091 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
SDE2-201ENST00000272091 ZNF777Q9ULD5 760 aaPredicted RBP17.92■□□□□ 0.46
SDE2-201ENST00000272091 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
SDE2-201ENST00000272091 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
SDE2-201ENST00000272091 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
SDE2-201ENST00000272091 WDR7Q9Y4E6 1490 aa17.89■□□□□ 0.45
SDE2-201ENST00000272091 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
SDE2-201ENST00000272091 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.45
SDE2-201ENST00000272091 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
SDE2-201ENST00000272091 NCOA1Q15788 1441 aa17.87■□□□□ 0.45
SDE2-201ENST00000272091 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
SDE2-201ENST00000272091 SYCP2Q9BX26 1530 aa17.86■□□□□ 0.45
SDE2-201ENST00000272091 ABCA9Q8IUA7 1624 aa17.85■□□□□ 0.45
SDE2-201ENST00000272091 PLCH2O75038 1416 aa17.85■□□□□ 0.45
SDE2-201ENST00000272091 ASXL2Q76L83 1435 aa17.84■□□□□ 0.45
SDE2-201ENST00000272091 ARHGEF12Q9NZN5 1544 aa17.83■□□□□ 0.45
SDE2-201ENST00000272091 C9orf84Q5VXU9 1444 aa17.83■□□□□ 0.44
SDE2-201ENST00000272091 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
SDE2-201ENST00000272091 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
SDE2-201ENST00000272091 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
SDE2-201ENST00000272091 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
SDE2-201ENST00000272091 CCDC141Q6ZP82 1450 aa17.82■□□□□ 0.44
SDE2-201ENST00000272091 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
SDE2-201ENST00000272091 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
SDE2-201ENST00000272091 ABCC1P33527 1531 aa17.8■□□□□ 0.44
SDE2-201ENST00000272091 KIAA1107Q9UPP5 1409 aa17.79■□□□□ 0.44
SDE2-201ENST00000272091 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
SDE2-201ENST00000272091 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
SDE2-201ENST00000272091 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
SDE2-201ENST00000272091 PZPP20742 1482 aa17.74■□□□□ 0.43
SDE2-201ENST00000272091 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
SDE2-201ENST00000272091 ANKRD50Q9ULJ7 1429 aa17.72■□□□□ 0.43
SDE2-201ENST00000272091 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
SDE2-201ENST00000272091 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
SDE2-201ENST00000272091 KIF15Q9NS87 1388 aa17.71■□□□□ 0.42
SDE2-201ENST00000272091 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.42
SDE2-201ENST00000272091 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
SDE2-201ENST00000272091 EFCAB2Q5VUJ9 269 aa17.7■□□□□ 0.42
SDE2-201ENST00000272091 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
SDE2-201ENST00000272091 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
SDE2-201ENST00000272091 FANCAO15360 1455 aa17.69■□□□□ 0.42
SDE2-201ENST00000272091 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
SDE2-201ENST00000272091 KDM5DQ9BY66 1539 aa17.68■□□□□ 0.42
SDE2-201ENST00000272091 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
SDE2-201ENST00000272091 ZFYVE16Q7Z3T8 1539 aa17.65■□□□□ 0.42
SDE2-201ENST00000272091 FOXD1Q16676 465 aa17.65■□□□□ 0.42
SDE2-201ENST00000272091 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
SDE2-201ENST00000272091 UNC13BO14795 1591 aa17.64■□□□□ 0.42
SDE2-201ENST00000272091 INO80Q9ULG1 1556 aaPredicted RBP17.64■□□□□ 0.41
SDE2-201ENST00000272091 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
SDE2-201ENST00000272091 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
SDE2-201ENST00000272091 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
SDE2-201ENST00000272091 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
SDE2-201ENST00000272091 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
SDE2-201ENST00000272091 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
SDE2-201ENST00000272091 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
SDE2-201ENST00000272091 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
SDE2-201ENST00000272091 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
SDE2-201ENST00000272091 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
SDE2-201ENST00000272091 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
SDE2-201ENST00000272091 AFAP1Q8N556 730 aa17.59■□□□□ 0.41
SDE2-201ENST00000272091 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.4
SDE2-201ENST00000272091 ATP7AQ04656 1500 aa17.58■□□□□ 0.4
SDE2-201ENST00000272091 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.4
SDE2-201ENST00000272091 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
SDE2-201ENST00000272091 GLI2P10070 1586 aa17.57■□□□□ 0.4
SDE2-201ENST00000272091 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
SDE2-201ENST00000272091 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
SDE2-201ENST00000272091 NUP155O75694 1391 aa17.57■□□□□ 0.4
SDE2-201ENST00000272091 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
SDE2-201ENST00000272091 IQGAP3Q86VI3 1631 aa17.56■□□□□ 0.4
SDE2-201ENST00000272091 KIDINS220Q9ULH0 1771 aa17.56■□□□□ 0.4
SDE2-201ENST00000272091 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
SDE2-201ENST00000272091 KDM5CP41229 1560 aa17.54■□□□□ 0.4
SDE2-201ENST00000272091 DIP2BQ9P265 1576 aa17.54■□□□□ 0.4
SDE2-201ENST00000272091 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
SDE2-201ENST00000272091 TEX14Q8IWB6 1497 aa17.53■□□□□ 0.4
SDE2-201ENST00000272091 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
SDE2-201ENST00000272091 PKD2Q13563 968 aa17.52■□□□□ 0.4
SDE2-201ENST00000272091 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
SDE2-201ENST00000272091 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
SDE2-201ENST00000272091 PPRC1Q5VV67 1664 aaKnown RBP17.5■□□□□ 0.39
SDE2-201ENST00000272091 NEO1Q92859 1461 aa17.5■□□□□ 0.39
SDE2-201ENST00000272091 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
SDE2-201ENST00000272091 EIF2AK4Q9P2K8 1649 aaKnown RBP17.48■□□□□ 0.39
SDE2-201ENST00000272091 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms