RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 MAPKBP1O60336 1514 aa22.61■■□□□ 1.21
MAP1LC3B-201ENST00000268607 TROQ12816 1431 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3B-201ENST00000268607 FKBP8Q14318 412 aa22.59■■□□□ 1.21
MAP1LC3B-201ENST00000268607 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3B-201ENST00000268607 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3B-201ENST00000268607 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
MAP1LC3B-201ENST00000268607 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
MAP1LC3B-201ENST00000268607 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.2
MAP1LC3B-201ENST00000268607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.22e-9■■■□□ 16.5
MAP1LC3B-201ENST00000268607 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
MAP1LC3B-201ENST00000268607 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-201ENST00000268607 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
MAP1LC3B-201ENST00000268607 MSH5O43196 834 aa22.43■■□□□ 1.18
MAP1LC3B-201ENST00000268607 ADCY10Q96PN6 1610 aa22.42■■□□□ 1.18
MAP1LC3B-201ENST00000268607 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
MAP1LC3B-201ENST00000268607 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
MAP1LC3B-201ENST00000268607 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
MAP1LC3B-201ENST00000268607 NAIPQ13075 1403 aa22.39■■□□□ 1.17
MAP1LC3B-201ENST00000268607 ABCC10Q5T3U5 1492 aa22.38■■□□□ 1.17
MAP1LC3B-201ENST00000268607 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-201ENST00000268607 MIA2Q96PC5 1412 aa22.38■■□□□ 1.17
MAP1LC3B-201ENST00000268607 NEFLP07196 543 aa22.37■■□□□ 1.17
MAP1LC3B-201ENST00000268607 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
MAP1LC3B-201ENST00000268607 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
MAP1LC3B-201ENST00000268607 ABCC5O15440 1437 aa22.35■■□□□ 1.17
MAP1LC3B-201ENST00000268607 TRIM52Q96A61 297 aa22.35■■□□□ 1.17
MAP1LC3B-201ENST00000268607 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
MAP1LC3B-201ENST00000268607 TCOF1Q13428 1488 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-201ENST00000268607 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
MAP1LC3B-201ENST00000268607 CDC42BPAQ5VT25 1732 aa22.33■■□□□ 1.17
MAP1LC3B-201ENST00000268607 DAPK1P53355 1430 aa22.33■■□□□ 1.16
MAP1LC3B-201ENST00000268607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.32■■□□□ 1.162e-6■■■■□ 19.9
MAP1LC3B-201ENST00000268607 FOXD1Q16676 465 aa22.31■■□□□ 1.16
MAP1LC3B-201ENST00000268607 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3B-201ENST00000268607 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
MAP1LC3B-201ENST00000268607 KDM6BO15054 1643 aa22.29■■□□□ 1.16
MAP1LC3B-201ENST00000268607 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
MAP1LC3B-201ENST00000268607 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
MAP1LC3B-201ENST00000268607 TONSLQ96HA7 1378 aa22.26■■□□□ 1.15
MAP1LC3B-201ENST00000268607 CDC42BPBQ9Y5S2 1711 aa22.24■■□□□ 1.15
MAP1LC3B-201ENST00000268607 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
MAP1LC3B-201ENST00000268607 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
MAP1LC3B-201ENST00000268607 ITSN2Q9NZM3 1697 aa22.23■■□□□ 1.15
MAP1LC3B-201ENST00000268607 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
MAP1LC3B-201ENST00000268607 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
MAP1LC3B-201ENST00000268607 WDR7Q9Y4E6 1490 aa22.21■■□□□ 1.15
MAP1LC3B-201ENST00000268607 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
MAP1LC3B-201ENST00000268607 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
MAP1LC3B-201ENST00000268607 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
MAP1LC3B-201ENST00000268607 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
MAP1LC3B-201ENST00000268607 DNMT1P26358 1616 aaKnown RBP22.19■■□□□ 1.14
MAP1LC3B-201ENST00000268607 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
MAP1LC3B-201ENST00000268607 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
MAP1LC3B-201ENST00000268607 SYCP2Q9BX26 1530 aa22.17■■□□□ 1.14
MAP1LC3B-201ENST00000268607 EFCAB2Q5VUJ9 269 aa22.17■■□□□ 1.14
MAP1LC3B-201ENST00000268607 MPHOSPH9Q99550 1183 aa22.16■■□□□ 1.14
MAP1LC3B-201ENST00000268607 NCOA1Q15788 1441 aa22.15■■□□□ 1.14
MAP1LC3B-201ENST00000268607 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
MAP1LC3B-201ENST00000268607 ARHGEF12Q9NZN5 1544 aa22.15■■□□□ 1.14
MAP1LC3B-201ENST00000268607 MBD5Q9P267 1494 aa22.15■■□□□ 1.14
MAP1LC3B-201ENST00000268607 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
MAP1LC3B-201ENST00000268607 PLCH2O75038 1416 aa22.14■■□□□ 1.13
MAP1LC3B-201ENST00000268607 C9orf84Q5VXU9 1444 aa22.13■■□□□ 1.13
MAP1LC3B-201ENST00000268607 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
MAP1LC3B-201ENST00000268607 ANP32CO43423 234 aa22.12■■□□□ 1.13
MAP1LC3B-201ENST00000268607 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
MAP1LC3B-201ENST00000268607 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
MAP1LC3B-201ENST00000268607 MYO5CQ9NQX4 1742 aa22.11■■□□□ 1.13
MAP1LC3B-201ENST00000268607 DEKP35659 375 aaKnown RBP22.11■■□□□ 1.13
MAP1LC3B-201ENST00000268607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.1■■□□□ 1.135e-8■□□□□ 8.4
MAP1LC3B-201ENST00000268607 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3B-201ENST00000268607 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
MAP1LC3B-201ENST00000268607 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
MAP1LC3B-201ENST00000268607 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-201ENST00000268607 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
MAP1LC3B-201ENST00000268607 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
MAP1LC3B-201ENST00000268607 ROCK1Q13464 1354 aa22.06■■□□□ 1.12
MAP1LC3B-201ENST00000268607 FANCAO15360 1455 aa22.05■■□□□ 1.12
MAP1LC3B-201ENST00000268607 FAM69CQ0P6D2 419 aa22.04■■□□□ 1.12
MAP1LC3B-201ENST00000268607 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3B-201ENST00000268607 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
MAP1LC3B-201ENST00000268607 ANKRD50Q9ULJ7 1429 aa22.04■■□□□ 1.12
MAP1LC3B-201ENST00000268607 CD109Q6YHK3 1445 aa22.02■■□□□ 1.12
MAP1LC3B-201ENST00000268607 RAPGEF3O95398 923 aa22.02■■□□□ 1.11
MAP1LC3B-201ENST00000268607 L3MBTL2Q969R5 705 aa22.01■■□□□ 1.11
MAP1LC3B-201ENST00000268607 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
MAP1LC3B-201ENST00000268607 CROCC2H7BZ55 1655 aa22■■□□□ 1.11
MAP1LC3B-201ENST00000268607 SPAG9O60271 1321 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3B-201ENST00000268607 NUP155O75694 1391 aa21.98■■□□□ 1.11
MAP1LC3B-201ENST00000268607 PKD2Q13563 968 aa21.97■■□□□ 1.11
MAP1LC3B-201ENST00000268607 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
MAP1LC3B-201ENST00000268607 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
MAP1LC3B-201ENST00000268607 RSPH4AQ5TD94 716 aa21.95■■□□□ 1.1
MAP1LC3B-201ENST00000268607 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
MAP1LC3B-201ENST00000268607 ABCC1P33527 1531 aa21.93■■□□□ 1.1
MAP1LC3B-201ENST00000268607 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
MAP1LC3B-201ENST00000268607 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
MAP1LC3B-201ENST00000268607 ARHGEF5Q12774 1597 aa21.93■■□□□ 1.1
MAP1LC3B-201ENST00000268607 PLEKHH2Q8IVE3 1493 aa21.93■■□□□ 1.1
MAP1LC3B-201ENST00000268607 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms