RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 AKNAQ7Z591 1439 aa17.08■□□□□ 0.32
SCAF11-201ENST00000266589 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
SCAF11-201ENST00000266589 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
SCAF11-201ENST00000266589 ABCC5O15440 1437 aa17.07■□□□□ 0.32
SCAF11-201ENST00000266589 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
SCAF11-201ENST00000266589 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-201ENST00000266589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■■□ 23.9
SCAF11-201ENST00000266589 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
SCAF11-201ENST00000266589 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
SCAF11-201ENST00000266589 MAPKBP1O60336 1514 aa17.05■□□□□ 0.32
SCAF11-201ENST00000266589 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
SCAF11-201ENST00000266589 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
SCAF11-201ENST00000266589 ADGBQ8N7X0 1667 aa17.03■□□□□ 0.32
SCAF11-201ENST00000266589 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
SCAF11-201ENST00000266589 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
SCAF11-201ENST00000266589 KDM6BO15054 1643 aa17■□□□□ 0.31
SCAF11-201ENST00000266589 KCNH8Q96L42 1107 aa17■□□□□ 0.31
SCAF11-201ENST00000266589 ARHGAP5Q13017 1502 aa16.99■□□□□ 0.31
SCAF11-201ENST00000266589 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
SCAF11-201ENST00000266589 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
SCAF11-201ENST00000266589 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
SCAF11-201ENST00000266589 SHANK2Q9UPX8 1470 aa16.95■□□□□ 0.3
SCAF11-201ENST00000266589 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
SCAF11-201ENST00000266589 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
SCAF11-201ENST00000266589 PLCH2O75038 1416 aa16.92■□□□□ 0.3
SCAF11-201ENST00000266589 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
SCAF11-201ENST00000266589 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
SCAF11-201ENST00000266589 CCDC141Q6ZP82 1450 aa16.91■□□□□ 0.3
SCAF11-201ENST00000266589 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
SCAF11-201ENST00000266589 ANKRD30AQ9BXX3 1397 aa16.91■□□□□ 0.3
SCAF11-201ENST00000266589 HNRNPMP52272 730 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCAF11-201ENST00000266589 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
SCAF11-201ENST00000266589 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
SCAF11-201ENST00000266589 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAF11-201ENST00000266589 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
SCAF11-201ENST00000266589 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
SCAF11-201ENST00000266589 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
SCAF11-201ENST00000266589 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
SCAF11-201ENST00000266589 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
SCAF11-201ENST00000266589 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
SCAF11-201ENST00000266589 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
SCAF11-201ENST00000266589 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
SCAF11-201ENST00000266589 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
SCAF11-201ENST00000266589 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
SCAF11-201ENST00000266589 ABCC1P33527 1531 aa16.86■□□□□ 0.29
SCAF11-201ENST00000266589 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
SCAF11-201ENST00000266589 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
SCAF11-201ENST00000266589 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
SCAF11-201ENST00000266589 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-201ENST00000266589 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.29
SCAF11-201ENST00000266589 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
SCAF11-201ENST00000266589 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
SCAF11-201ENST00000266589 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
SCAF11-201ENST00000266589 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
SCAF11-201ENST00000266589 FANCAO15360 1455 aa16.79■□□□□ 0.28
SCAF11-201ENST00000266589 PLXNC1O60486 1568 aa16.79■□□□□ 0.28
SCAF11-201ENST00000266589 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
SCAF11-201ENST00000266589 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.27
SCAF11-201ENST00000266589 PZPP20742 1482 aa16.77■□□□□ 0.27
SCAF11-201ENST00000266589 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
SCAF11-201ENST00000266589 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
SCAF11-201ENST00000266589 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
SCAF11-201ENST00000266589 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SCAF11-201ENST00000266589 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
SCAF11-201ENST00000266589 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
SCAF11-201ENST00000266589 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
SCAF11-201ENST00000266589 FOXD1Q16676 465 aa16.73■□□□□ 0.27
SCAF11-201ENST00000266589 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
SCAF11-201ENST00000266589 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
SCAF11-201ENST00000266589 DUOX2Q9NRD8 1548 aa16.71■□□□□ 0.27
SCAF11-201ENST00000266589 ZFYVE16Q7Z3T8 1539 aa16.71■□□□□ 0.26
SCAF11-201ENST00000266589 NUP155O75694 1391 aa16.7■□□□□ 0.26
SCAF11-201ENST00000266589 ANKRD30BQ9BXX2 1392 aa16.69■□□□□ 0.26
SCAF11-201ENST00000266589 UNC13BO14795 1591 aa16.69■□□□□ 0.26
SCAF11-201ENST00000266589 SCAPERQ9BY12 1400 aa16.69■□□□□ 0.26
SCAF11-201ENST00000266589 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
SCAF11-201ENST00000266589 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-201ENST00000266589 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
SCAF11-201ENST00000266589 RTEL1-TNFRSF6BF6WH68 1400 aa16.68■□□□□ 0.26
SCAF11-201ENST00000266589 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
SCAF11-201ENST00000266589 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
SCAF11-201ENST00000266589 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-201ENST00000266589 MAP3K4Q9Y6R4 1608 aa16.65■□□□□ 0.26
SCAF11-201ENST00000266589 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
SCAF11-201ENST00000266589 PKD2Q13563 968 aa16.65■□□□□ 0.26
SCAF11-201ENST00000266589 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.26
SCAF11-201ENST00000266589 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
SCAF11-201ENST00000266589 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
SCAF11-201ENST00000266589 GLI2P10070 1586 aa16.62■□□□□ 0.25
SCAF11-201ENST00000266589 IQGAP3Q86VI3 1631 aa16.62■□□□□ 0.25
SCAF11-201ENST00000266589 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
SCAF11-201ENST00000266589 NEO1Q92859 1461 aa16.61■□□□□ 0.25
SCAF11-201ENST00000266589 POGZQ7Z3K3 1410 aa16.6■□□□□ 0.25
SCAF11-201ENST00000266589 KIDINS220Q9ULH0 1771 aa16.6■□□□□ 0.25
SCAF11-201ENST00000266589 DIP2BQ9P265 1576 aa16.59■□□□□ 0.25
SCAF11-201ENST00000266589 KDM5CP41229 1560 aa16.59■□□□□ 0.25
SCAF11-201ENST00000266589 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.25
SCAF11-201ENST00000266589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.246e-8■□□□□ 11.1
SCAF11-201ENST00000266589 TEX14Q8IWB6 1497 aa16.58■□□□□ 0.24
SCAF11-201ENST00000266589 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms