RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SETD5Q9C0A6 1442 aa7.22□□□□□ -1.25
VCAN-201ENST00000265077 HSP90AB1P08238 724 aaKnown RBP7.22□□□□□ -1.25
VCAN-201ENST00000265077 KIAA2012Q0VF49 1180 aa7.21□□□□□ -1.25
VCAN-201ENST00000265077 CARD11Q9BXL7 1154 aa7.21□□□□□ -1.25
VCAN-201ENST00000265077 ARHGAP35Q9NRY4 1499 aa7.2□□□□□ -1.26
VCAN-201ENST00000265077 PLEKHD1A6NEE1 506 aa7.2□□□□□ -1.26
VCAN-201ENST00000265077 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
VCAN-201ENST00000265077 CHMP7Q8WUX9 453 aaPredicted RBP7.2□□□□□ -1.26
VCAN-201ENST00000265077 GBP4Q96PP9 640 aa7.19□□□□□ -1.26
VCAN-201ENST00000265077 MAPK8IP3Q9UPT6 1336 aa7.19□□□□□ -1.26
VCAN-201ENST00000265077 HOMEZQ8IX15 550 aa7.19□□□□□ -1.26
VCAN-201ENST00000265077 RGS3P49796 1198 aa7.19□□□□□ -1.26
VCAN-201ENST00000265077 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
VCAN-201ENST00000265077 CCDC66A2RUB6 948 aa7.18□□□□□ -1.26
VCAN-201ENST00000265077 GOLGA6L1Q8N7Z2 621 aa7.18□□□□□ -1.26
VCAN-201ENST00000265077 MCCP23508 829 aa7.18□□□□□ -1.26
VCAN-201ENST00000265077 PAXIP1Q6ZW49 1069 aaPredicted RBP7.18□□□□□ -1.26
VCAN-201ENST00000265077 BCL11BQ9C0K0 894 aaPredicted RBP7.18□□□□□ -1.26
VCAN-201ENST00000265077 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
VCAN-201ENST00000265077 FRAT1Q92837 279 aaPredicted RBP7.17□□□□□ -1.26
VCAN-201ENST00000265077 GZF1Q9H116 711 aaPredicted RBP7.17□□□□□ -1.26
VCAN-201ENST00000265077 TMF1P82094 1093 aa7.17□□□□□ -1.26
VCAN-201ENST00000265077 RALBP1Q15311 655 aa7.17□□□□□ -1.26
VCAN-201ENST00000265077 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
VCAN-201ENST00000265077 MSH5O43196 834 aa7.17□□□□□ -1.26
VCAN-201ENST00000265077 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
VCAN-201ENST00000265077 FGD1P98174 961 aa7.16□□□□□ -1.26
VCAN-201ENST00000265077 KTN1Q86UP2 1357 aaKnown RBP7.15□□□□□ -1.26
VCAN-201ENST00000265077 PDCL3Q9H2J4 239 aa7.15□□□□□ -1.26
VCAN-201ENST00000265077 SIN3AQ96ST3 1273 aa7.15□□□□□ -1.26
VCAN-201ENST00000265077 IRX3P78415 501 aaPredicted RBP7.15□□□□□ -1.27
VCAN-201ENST00000265077 RCAN3Q9UKA8 241 aa7.15□□□□□ -1.27
VCAN-201ENST00000265077 ROCK2O75116 1388 aaKnown RBP7.14□□□□□ -1.27
VCAN-201ENST00000265077 PHLDB1Q86UU1 1377 aa7.14□□□□□ -1.27
VCAN-201ENST00000265077 IPO8O15397 1037 aaKnown RBP7.14□□□□□ -1.27
VCAN-201ENST00000265077 RGL3Q3MIN7 710 aa7.14□□□□□ -1.27
VCAN-201ENST00000265077 SLKQ9H2G2 1235 aaPredicted RBP7.14□□□□□ -1.27
VCAN-201ENST00000265077 GOLGA6L4A6NEF3 574 aa7.14□□□□□ -1.27
VCAN-201ENST00000265077 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
VCAN-201ENST00000265077 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
VCAN-201ENST00000265077 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
VCAN-201ENST00000265077 ABCC8Q09428 1581 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 FMN1Q68DA7 1419 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 SETQ01105 290 aaPredicted RBP7.13□□□□□ -1.27
VCAN-201ENST00000265077 SYAP1Q96A49 352 aaPredicted RBP7.13□□□□□ -1.27
VCAN-201ENST00000265077 KANK1Q14678 1352 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 PDE3BQ13370 1112 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
VCAN-201ENST00000265077 RAB3GAP2Q9H2M9 1393 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 NFKBIBQ15653 356 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 SMARCA2P51531 1590 aa7.13□□□□□ -1.27
VCAN-201ENST00000265077 WIZO95785 1651 aa7.12□□□□□ -1.27
VCAN-201ENST00000265077 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
VCAN-201ENST00000265077 PAK3O75914 559 aaPredicted RBP7.11□□□□□ -1.27
VCAN-201ENST00000265077 CALD1Q05682 793 aaKnown RBP7.11□□□□□ -1.27
VCAN-201ENST00000265077 KCNJ4P48050 445 aa7.11□□□□□ -1.27
VCAN-201ENST00000265077 CARMIL1Q5VZK9 1371 aa7.11□□□□□ -1.27
VCAN-201ENST00000265077 TOP2AP11388 1531 aaKnown RBP7.11□□□□□ -1.27
VCAN-201ENST00000265077 TSPYL1Q9H0U9 437 aa7.11□□□□□ -1.27
VCAN-201ENST00000265077 PLCB2Q00722 1185 aa7.1□□□□□ -1.27
VCAN-201ENST00000265077 CC2D1BQ5T0F9 858 aaKnown RBP7.1□□□□□ -1.27
VCAN-201ENST00000265077 RWDD1Q9H446 243 aaPredicted RBP7.1□□□□□ -1.27
VCAN-201ENST00000265077 ZHX1Q9UKY1 873 aaPredicted RBP7.1□□□□□ -1.27
VCAN-201ENST00000265077 EIF3AQ14152 1382 aaKnown RBP7.09□□□□□ -1.27
VCAN-201ENST00000265077 PHF14O94880 888 aa7.09□□□□□ -1.27
VCAN-201ENST00000265077 EIF4G1Q04637 1599 aaKnown RBP7.09□□□□□ -1.27
VCAN-201ENST00000265077 OS9Q13438 667 aaPredicted RBP7.09□□□□□ -1.27
VCAN-201ENST00000265077 KIAA1211Q6ZU35 1233 aa7.09□□□□□ -1.27
VCAN-201ENST00000265077 MAPK8IP2Q13387 824 aaPredicted RBP7.09□□□□□ -1.27
VCAN-201ENST00000265077 SOGA1O94964 1423 aa7.09□□□□□ -1.27
VCAN-201ENST00000265077 CUX2O14529 1486 aa7.09□□□□□ -1.27
VCAN-201ENST00000265077 MRE11P49959 708 aa7.09□□□□□ -1.28
VCAN-201ENST00000265077 HSPA5P11021 654 aaKnown RBP7.09□□□□□ -1.28
VCAN-201ENST00000265077 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.28
VCAN-201ENST00000265077 C11orf95C9JLR9 678 aaPredicted RBP7.08□□□□□ -1.28
VCAN-201ENST00000265077 PDE4AP27815 886 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 NEUROD2Q15784 382 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 AEBP1Q8IUX7 1158 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 TEX35Q5T0J7 233 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 AAMPQ13685 434 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 DCAF11Q8TEB1 546 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 ZBTB7CA1YPR0 619 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 HMGB1P09429 215 aaKnown RBP7.08□□□□□ -1.28
VCAN-201ENST00000265077 GPS2Q13227 327 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 HTATSF1O43719 755 aaKnown RBP7.08□□□□□ -1.28
VCAN-201ENST00000265077 DRC7Q8IY82 874 aa7.08□□□□□ -1.28
VCAN-201ENST00000265077 HSP90B1P14625 803 aaKnown RBP7.07□□□□□ -1.28
VCAN-201ENST00000265077 CHMP4AQ9BY43 222 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
VCAN-201ENST00000265077 ZBED9Q6R2W3 1325 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 CCDC88BA6NC98 1476 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 NLRP13Q86W25 1043 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 POGKQ9P215 609 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 CWC15Q9P013 229 aaKnown RBP7.07□□□□□ -1.28
VCAN-201ENST00000265077 HMGN5P82970 282 aaKnown RBP7.07□□□□□ -1.28
VCAN-201ENST00000265077 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
VCAN-201ENST00000265077 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
VCAN-201ENST00000265077 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
VCAN-201ENST00000265077 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms