RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
NID1-201ENST00000264187 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
NID1-201ENST00000264187 GBP4Q96PP9 640 aa19.09■□□□□ 0.65
NID1-201ENST00000264187 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
NID1-201ENST00000264187 NOL8Q76FK4 1167 aaKnown RBP19.08■□□□□ 0.65
NID1-201ENST00000264187 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.65
NID1-201ENST00000264187 MLECQ14165 292 aa19.07■□□□□ 0.64
NID1-201ENST00000264187 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
NID1-201ENST00000264187 TMF1P82094 1093 aa19.05■□□□□ 0.64
NID1-201ENST00000264187 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
NID1-201ENST00000264187 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
NID1-201ENST00000264187 MFAP1P55081 439 aaKnown RBP19.03■□□□□ 0.64
NID1-201ENST00000264187 GOLGA6L1Q8N7Z2 621 aa19.01■□□□□ 0.63
NID1-201ENST00000264187 STK26Q9P289 416 aa19.01■□□□□ 0.63
NID1-201ENST00000264187 RASSF8Q8NHQ8 419 aa19.01■□□□□ 0.63
NID1-201ENST00000264187 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
NID1-201ENST00000264187 FOXD4L5Q5VV16 416 aaPredicted RBP19■□□□□ 0.63
NID1-201ENST00000264187 FOXD4L4Q8WXT5 416 aaPredicted RBP19■□□□□ 0.63
NID1-201ENST00000264187 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
NID1-201ENST00000264187 TPM4P67936 248 aa18.99■□□□□ 0.63
NID1-201ENST00000264187 GOLGA6L3A6NEY3 463 aa18.98■□□□□ 0.63
NID1-201ENST00000264187 GORABQ5T7V8 394 aa18.98■□□□□ 0.63
NID1-201ENST00000264187 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
NID1-201ENST00000264187 TRIM6-TRIM34B2RNG4 842 aa18.98■□□□□ 0.63
NID1-201ENST00000264187 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
NID1-201ENST00000264187 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
NID1-201ENST00000264187 WWC1Q8IX03 1113 aa18.96■□□□□ 0.63
NID1-201ENST00000264187 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
NID1-201ENST00000264187 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
NID1-201ENST00000264187 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
NID1-201ENST00000264187 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
NID1-201ENST00000264187 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.62
NID1-201ENST00000264187 RWDD1Q9H446 243 aaPredicted RBP18.93■□□□□ 0.62
NID1-201ENST00000264187 PATL2C9JE40 543 aaKnown RBP18.92■□□□□ 0.62
NID1-201ENST00000264187 CEP162Q5TB80 1403 aa18.92■□□□□ 0.62
NID1-201ENST00000264187 CALD1Q05682 793 aaKnown RBP18.91■□□□□ 0.62
NID1-201ENST00000264187 PTMSP20962 102 aa18.91■□□□□ 0.62
NID1-201ENST00000264187 TOMM22Q9NS69 142 aa18.91■□□□□ 0.62
NID1-201ENST00000264187 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
NID1-201ENST00000264187 PES1O00541 588 aaKnown RBP18.91■□□□□ 0.62
NID1-201ENST00000264187 VPS53Q5VIR6 699 aa18.9■□□□□ 0.62
NID1-201ENST00000264187 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
NID1-201ENST00000264187 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
NID1-201ENST00000264187 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
NID1-201ENST00000264187 CEP89Q96ST8 783 aa18.89■□□□□ 0.61
NID1-201ENST00000264187 CCAR2Q8N163 923 aaKnown RBP18.88■□□□□ 0.61
NID1-201ENST00000264187 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
NID1-201ENST00000264187 TPM3P06753 285 aa18.87■□□□□ 0.61
NID1-201ENST00000264187 FOXD4L6Q3SYB3 417 aaPredicted RBP18.87■□□□□ 0.61
NID1-201ENST00000264187 FOXD4L3Q6VB84 417 aaPredicted RBP18.87■□□□□ 0.61
NID1-201ENST00000264187 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
NID1-201ENST00000264187 FOXD1Q16676 465 aa18.85■□□□□ 0.61
NID1-201ENST00000264187 CCDC34Q96HJ3 373 aa18.85■□□□□ 0.61
NID1-201ENST00000264187 TMX4Q9H1E5 349 aaPredicted RBP18.85■□□□□ 0.61
NID1-201ENST00000264187 HDGFL2Q7Z4V5 671 aaPredicted RBP18.85■□□□□ 0.61
NID1-201ENST00000264187 MARCH6O60337 910 aa18.84■□□□□ 0.61
NID1-201ENST00000264187 SMC4Q9NTJ3 1288 aa18.84■□□□□ 0.61
NID1-201ENST00000264187 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.61
NID1-201ENST00000264187 STK31Q9BXU1 1019 aa18.83■□□□□ 0.61
NID1-201ENST00000264187 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.6
NID1-201ENST00000264187 SF3A1Q15459 793 aaKnown RBP18.82■□□□□ 0.6
NID1-201ENST00000264187 G3V3G9 751 aa18.82■□□□□ 0.6
NID1-201ENST00000264187 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
NID1-201ENST00000264187 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
NID1-201ENST00000264187 GGT6Q6P531 493 aa18.82■□□□□ 0.6
NID1-201ENST00000264187 GPATCH3Q96I76 525 aa18.82■□□□□ 0.6
NID1-201ENST00000264187 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
NID1-201ENST00000264187 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
NID1-201ENST00000264187 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
NID1-201ENST00000264187 HSP90AA2PQ14568 343 aaPredicted RBP18.8■□□□□ 0.6
NID1-201ENST00000264187 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
NID1-201ENST00000264187 IPO9Q96P70 1041 aaKnown RBP18.78■□□□□ 0.6
NID1-201ENST00000264187 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
NID1-201ENST00000264187 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
NID1-201ENST00000264187 CSPP1Q1MSJ5 1256 aa18.78■□□□□ 0.6
NID1-201ENST00000264187 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
NID1-201ENST00000264187 KANK1Q14678 1352 aa18.77■□□□□ 0.6
NID1-201ENST00000264187 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
NID1-201ENST00000264187 KIF16BQ96L93 1317 aa18.77■□□□□ 0.59
NID1-201ENST00000264187 CCNB3Q8WWL7 1395 aa18.76■□□□□ 0.59
NID1-201ENST00000264187 SETQ01105 290 aaPredicted RBP18.76■□□□□ 0.59
NID1-201ENST00000264187 ZNF592Q92610 1267 aa18.75■□□□□ 0.59
NID1-201ENST00000264187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.75■□□□□ 0.59
NID1-201ENST00000264187 VSIG10Q8N0Z9 540 aa18.75■□□□□ 0.59
NID1-201ENST00000264187 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
NID1-201ENST00000264187 HMMRO75330 724 aa18.74■□□□□ 0.59
NID1-201ENST00000264187 LTV1Q96GA3 475 aaPredicted RBP18.74■□□□□ 0.59
NID1-201ENST00000264187 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
NID1-201ENST00000264187 H3BQV1 296 aa18.73■□□□□ 0.59
NID1-201ENST00000264187 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
NID1-201ENST00000264187 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
NID1-201ENST00000264187 ST18O60284 1047 aa18.72■□□□□ 0.59
NID1-201ENST00000264187 PHF14O94880 888 aa18.71■□□□□ 0.59
NID1-201ENST00000264187 PKD2Q13563 968 aa18.71■□□□□ 0.59
NID1-201ENST00000264187 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
NID1-201ENST00000264187 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
NID1-201ENST00000264187 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
NID1-201ENST00000264187 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
NID1-201ENST00000264187 RAD21O60216 631 aa18.69■□□□□ 0.58
NID1-201ENST00000264187 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms