RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
ARFGEF1-201ENST00000262215 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
ARFGEF1-201ENST00000262215 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.11
ARFGEF1-201ENST00000262215 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
ARFGEF1-201ENST00000262215 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
ARFGEF1-201ENST00000262215 MLECQ14165 292 aa15.74■□□□□ 0.11
ARFGEF1-201ENST00000262215 CHMP4BQ9H444 224 aaKnown RBP15.74■□□□□ 0.11
ARFGEF1-201ENST00000262215 VPS53Q5VIR6 699 aa15.73■□□□□ 0.11
ARFGEF1-201ENST00000262215 MS4A1P11836 297 aa15.72■□□□□ 0.11
ARFGEF1-201ENST00000262215 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
ARFGEF1-201ENST00000262215 PES1O00541 588 aaKnown RBP15.72■□□□□ 0.11
ARFGEF1-201ENST00000262215 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
ARFGEF1-201ENST00000262215 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
ARFGEF1-201ENST00000262215 GBP4Q96PP9 640 aa15.71■□□□□ 0.11
ARFGEF1-201ENST00000262215 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
ARFGEF1-201ENST00000262215 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
ARFGEF1-201ENST00000262215 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
ARFGEF1-201ENST00000262215 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
ARFGEF1-201ENST00000262215 FOXD4L6Q3SYB3 417 aaPredicted RBP15.69■□□□□ 0.1
ARFGEF1-201ENST00000262215 FOXD4L3Q6VB84 417 aaPredicted RBP15.69■□□□□ 0.1
ARFGEF1-201ENST00000262215 CCDC9Q9Y3X0 531 aaKnown RBP15.69■□□□□ 0.1
ARFGEF1-201ENST00000262215 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
ARFGEF1-201ENST00000262215 STK26Q9P289 416 aa15.68■□□□□ 0.1
ARFGEF1-201ENST00000262215 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
ARFGEF1-201ENST00000262215 TPM4P67936 248 aa15.68■□□□□ 0.1
ARFGEF1-201ENST00000262215 CEP89Q96ST8 783 aa15.67■□□□□ 0.1
ARFGEF1-201ENST00000262215 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
ARFGEF1-201ENST00000262215 MORC1Q86VD1 984 aa15.67■□□□□ 0.1
ARFGEF1-201ENST00000262215 GOLGA6L3A6NEY3 463 aa15.65■□□□□ 0.1
ARFGEF1-201ENST00000262215 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
ARFGEF1-201ENST00000262215 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
ARFGEF1-201ENST00000262215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
ARFGEF1-201ENST00000262215 PTMSP20962 102 aa15.64■□□□□ 0.09
ARFGEF1-201ENST00000262215 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
ARFGEF1-201ENST00000262215 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
ARFGEF1-201ENST00000262215 MARCH6O60337 910 aa15.63■□□□□ 0.09
ARFGEF1-201ENST00000262215 TAF7LQ5H9L4 462 aa15.63■□□□□ 0.09
ARFGEF1-201ENST00000262215 BCL11BQ9C0K0 894 aaPredicted RBP15.62■□□□□ 0.09
ARFGEF1-201ENST00000262215 G3V3G9 751 aa15.62■□□□□ 0.09
ARFGEF1-201ENST00000262215 DCAF8Q5TAQ9 597 aa15.62■□□□□ 0.09
ARFGEF1-201ENST00000262215 TPM3P06753 285 aa15.62■□□□□ 0.09
ARFGEF1-201ENST00000262215 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
ARFGEF1-201ENST00000262215 SYAP1Q96A49 352 aaPredicted RBP15.61■□□□□ 0.09
ARFGEF1-201ENST00000262215 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
ARFGEF1-201ENST00000262215 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
ARFGEF1-201ENST00000262215 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
ARFGEF1-201ENST00000262215 TMX4Q9H1E5 349 aaPredicted RBP15.59■□□□□ 0.09
ARFGEF1-201ENST00000262215 TMF1P82094 1093 aa15.58■□□□□ 0.09
ARFGEF1-201ENST00000262215 SETQ01105 290 aaPredicted RBP15.58■□□□□ 0.08
ARFGEF1-201ENST00000262215 ZNF592Q92610 1267 aa15.57■□□□□ 0.08
ARFGEF1-201ENST00000262215 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
ARFGEF1-201ENST00000262215 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
ARFGEF1-201ENST00000262215 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
ARFGEF1-201ENST00000262215 SF3A1Q15459 793 aaKnown RBP15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 TPD52L1Q16890 204 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 HSP90AA2PQ14568 343 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 RAD21O60216 631 aa15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 KRI1Q8N9T8 703 aaKnown RBP15.56■□□□□ 0.08
ARFGEF1-201ENST00000262215 SLC4A3P48751 1232 aa15.54■□□□□ 0.08
ARFGEF1-201ENST00000262215 IPO8O15397 1037 aaKnown RBP15.54■□□□□ 0.08
ARFGEF1-201ENST00000262215 CALRP27797 417 aaKnown RBP15.54■□□□□ 0.08
ARFGEF1-201ENST00000262215 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
ARFGEF1-201ENST00000262215 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
ARFGEF1-201ENST00000262215 CLIP1P30622 1438 aa15.53■□□□□ 0.08
ARFGEF1-201ENST00000262215 RWDD1Q9H446 243 aaPredicted RBP15.53■□□□□ 0.08
ARFGEF1-201ENST00000262215 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
ARFGEF1-201ENST00000262215 CCDC34Q96HJ3 373 aa15.51■□□□□ 0.07
ARFGEF1-201ENST00000262215 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
ARFGEF1-201ENST00000262215 RCAN3Q9UKA8 241 aa15.5■□□□□ 0.07
ARFGEF1-201ENST00000262215 FBXW7Q969H0 707 aa15.5■□□□□ 0.07
ARFGEF1-201ENST00000262215 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
ARFGEF1-201ENST00000262215 SMC4Q9NTJ3 1288 aa15.49■□□□□ 0.07
ARFGEF1-201ENST00000262215 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
ARFGEF1-201ENST00000262215 FOXD1Q16676 465 aa15.49■□□□□ 0.07
ARFGEF1-201ENST00000262215 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
ARFGEF1-201ENST00000262215 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
ARFGEF1-201ENST00000262215 PCMTD1Q96MG8 357 aaPredicted RBP15.48■□□□□ 0.07
ARFGEF1-201ENST00000262215 H3BQV1 296 aa15.48■□□□□ 0.07
ARFGEF1-201ENST00000262215 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
ARFGEF1-201ENST00000262215 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
ARFGEF1-201ENST00000262215 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
ARFGEF1-201ENST00000262215 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
ARFGEF1-201ENST00000262215 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
ARFGEF1-201ENST00000262215 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
ARFGEF1-201ENST00000262215 RILPL2Q969X0 211 aa15.46■□□□□ 0.07
ARFGEF1-201ENST00000262215 MCTP1Q6DN14 999 aa15.46■□□□□ 0.07
ARFGEF1-201ENST00000262215 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
ARFGEF1-201ENST00000262215 GGT6Q6P531 493 aa15.45■□□□□ 0.06
ARFGEF1-201ENST00000262215 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
ARFGEF1-201ENST00000262215 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
ARFGEF1-201ENST00000262215 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
ARFGEF1-201ENST00000262215 GOLGA6L19H0YKK7 550 aa15.44■□□□□ 0.06
ARFGEF1-201ENST00000262215 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
ARFGEF1-201ENST00000262215 BECN2A8MW95 431 aa15.43■□□□□ 0.06
ARFGEF1-201ENST00000262215 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
ARFGEF1-201ENST00000262215 RRP12Q5JTH9 1297 aaKnown RBP15.43■□□□□ 0.06
ARFGEF1-201ENST00000262215 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
ARFGEF1-201ENST00000262215 FAM184AQ8NB25 1140 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms