RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF777Q9ULD5 760 aaPredicted RBP33.04■■■□□ 2.88
SIX3-201ENST00000260653 ABCC5O15440 1437 aa33.03■■■□□ 2.88
SIX3-201ENST00000260653 RRP7BPQ9NSQ0 103 aa33■■■□□ 2.87
SIX3-201ENST00000260653 TTC37Q6PGP7 1564 aa32.99■■■□□ 2.87
SIX3-201ENST00000260653 AKNAQ7Z591 1439 aa32.98■■■□□ 2.87
SIX3-201ENST00000260653 GCC2Q8IWJ2 1684 aa32.98■■■□□ 2.87
SIX3-201ENST00000260653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.98■■■□□ 2.87
SIX3-201ENST00000260653 MAPKBP1O60336 1514 aa32.96■■■□□ 2.87
SIX3-201ENST00000260653 PREX2Q70Z35 1606 aa32.96■■■□□ 2.87
SIX3-201ENST00000260653 CDC42BPBQ9Y5S2 1711 aa32.94■■■□□ 2.86
SIX3-201ENST00000260653 KCNH8Q96L42 1107 aa32.93■■■□□ 2.86
SIX3-201ENST00000260653 ROCK1Q13464 1354 aa32.9■■■□□ 2.86
SIX3-201ENST00000260653 CROCC2H7BZ55 1655 aa32.89■■■□□ 2.86
SIX3-201ENST00000260653 KDM6BO15054 1643 aa32.87■■■□□ 2.85
SIX3-201ENST00000260653 MYO5CQ9NQX4 1742 aa32.85■■■□□ 2.85
SIX3-201ENST00000260653 SAMD9LQ8IVG5 1584 aa32.85■■■□□ 2.85
SIX3-201ENST00000260653 ARHGAP5Q13017 1502 aa32.82■■■□□ 2.85
SIX3-201ENST00000260653 ADGBQ8N7X0 1667 aa32.81■■■□□ 2.84
SIX3-201ENST00000260653 WDR7Q9Y4E6 1490 aa32.81■■■□□ 2.84
SIX3-201ENST00000260653 ADGRL2O95490 1459 aa32.77■■■□□ 2.84
SIX3-201ENST00000260653 NCOA1Q15788 1441 aa32.76■■■□□ 2.84
SIX3-201ENST00000260653 MBD5Q9P267 1494 aa32.76■■■□□ 2.84
SIX3-201ENST00000260653 HNRNPMP52272 730 aaKnown RBP eCLIP32.76■■■□□ 2.84
SIX3-201ENST00000260653 ARHGEF5Q12774 1597 aa32.76■■■□□ 2.83
SIX3-201ENST00000260653 SHANK2Q9UPX8 1470 aa32.74■■■□□ 2.83
SIX3-201ENST00000260653 PLCH2O75038 1416 aa32.73■■■□□ 2.83
SIX3-201ENST00000260653 ASXL2Q76L83 1435 aa32.72■■■□□ 2.83
SIX3-201ENST00000260653 C9orf84Q5VXU9 1444 aa32.72■■■□□ 2.83
SIX3-201ENST00000260653 SYCP2Q9BX26 1530 aa32.71■■■□□ 2.83
SIX3-201ENST00000260653 ANKRD30AQ9BXX3 1397 aa32.69■■■□□ 2.82
SIX3-201ENST00000260653 CCDC141Q6ZP82 1450 aa32.69■■■□□ 2.82
SIX3-201ENST00000260653 TRIM52Q96A61 297 aa32.67■■■□□ 2.82
SIX3-201ENST00000260653 NPM1P06748 294 aaKnown RBP eCLIP32.66■■■□□ 2.82
SIX3-201ENST00000260653 SIN3AQ96ST3 1273 aa32.66■■■□□ 2.82
SIX3-201ENST00000260653 TSPY4P0CV99 314 aa32.65■■■□□ 2.82
SIX3-201ENST00000260653 TSPY10P0CW01 314 aa32.65■■■□□ 2.82
SIX3-201ENST00000260653 PLEKHH2Q8IVE3 1493 aa32.62■■■□□ 2.81
SIX3-201ENST00000260653 ABCA9Q8IUA7 1624 aa32.62■■■□□ 2.81
SIX3-201ENST00000260653 KIAA1107Q9UPP5 1409 aa32.61■■■□□ 2.81
SIX3-201ENST00000260653 DENND4BO75064 1496 aaPredicted RBP32.61■■■□□ 2.81
SIX3-201ENST00000260653 EFCAB2Q5VUJ9 269 aa32.6■■■□□ 2.81
SIX3-201ENST00000260653 RSPH4AQ5TD94 716 aa32.6■■■□□ 2.81
SIX3-201ENST00000260653 NEUROD1Q13562 356 aa32.59■■■□□ 2.81
SIX3-201ENST00000260653 ARAP3Q8WWN8 1544 aa32.59■■■□□ 2.81
SIX3-201ENST00000260653 ARHGEF12Q9NZN5 1544 aa32.59■■■□□ 2.81
SIX3-201ENST00000260653 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
SIX3-201ENST00000260653 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
SIX3-201ENST00000260653 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
SIX3-201ENST00000260653 ABCC1P33527 1531 aa32.56■■■□□ 2.8
SIX3-201ENST00000260653 ANKRD50Q9ULJ7 1429 aa32.56■■■□□ 2.8
SIX3-201ENST00000260653 MPHOSPH9Q99550 1183 aa32.53■■■□□ 2.8
SIX3-201ENST00000260653 ACIN1Q9UKV3 1341 aaKnown RBP32.53■■■□□ 2.8
SIX3-201ENST00000260653 KIF15Q9NS87 1388 aa32.53■■■□□ 2.8
SIX3-201ENST00000260653 MAST1Q9Y2H9 1570 aa32.52■■■□□ 2.8
SIX3-201ENST00000260653 CYB5RLQ6IPT4 315 aa32.51■■■□□ 2.79
SIX3-201ENST00000260653 FANCAO15360 1455 aa32.48■■■□□ 2.79
SIX3-201ENST00000260653 TRAPPC8Q9Y2L5 1435 aa32.45■■■□□ 2.79
SIX3-201ENST00000260653 PZPP20742 1482 aa32.44■■■□□ 2.78
SIX3-201ENST00000260653 ZNF316A6NFI3 1004 aaPredicted RBP32.42■■■□□ 2.78
SIX3-201ENST00000260653 FOXD1Q16676 465 aa32.41■■■□□ 2.78
SIX3-201ENST00000260653 PLXNC1O60486 1568 aa32.41■■■□□ 2.78
SIX3-201ENST00000260653 SLC4A1APQ9BWU0 796 aaKnown RBP32.41■■■□□ 2.78
SIX3-201ENST00000260653 TIMELESSQ9UNS1 1208 aa32.4■■■□□ 2.78
SIX3-201ENST00000260653 ADGRL1O94910 1474 aa32.34■■■□□ 2.77
SIX3-201ENST00000260653 TONSLQ96HA7 1378 aa32.34■■■□□ 2.77
SIX3-201ENST00000260653 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
SIX3-201ENST00000260653 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
SIX3-201ENST00000260653 NUP155O75694 1391 aa32.31■■■□□ 2.76
SIX3-201ENST00000260653 ANKRD30BQ9BXX2 1392 aa32.31■■■□□ 2.76
SIX3-201ENST00000260653 SCAPERQ9BY12 1400 aa32.3■■■□□ 2.76
SIX3-201ENST00000260653 KDM5DQ9BY66 1539 aa32.3■■■□□ 2.76
SIX3-201ENST00000260653 SPAG9O60271 1321 aaKnown RBP32.29■■■□□ 2.76
SIX3-201ENST00000260653 ZFYVE16Q7Z3T8 1539 aa32.28■■■□□ 2.76
SIX3-201ENST00000260653 DUOX2Q9NRD8 1548 aa32.28■■■□□ 2.76
SIX3-201ENST00000260653 PPP1R15AO75807 674 aaPredicted RBP32.25■■■□□ 2.75
SIX3-201ENST00000260653 RTEL1-TNFRSF6BF6WH68 1400 aa32.24■■■□□ 2.75
SIX3-201ENST00000260653 PKD2Q13563 968 aa32.23■■■□□ 2.75
SIX3-201ENST00000260653 CFAP74Q9C0B2 1584 aa32.22■■■□□ 2.75
SIX3-201ENST00000260653 INO80Q9ULG1 1556 aaPredicted RBP32.22■■■□□ 2.75
SIX3-201ENST00000260653 ERBINQ96RT1 1412 aa32.21■■■□□ 2.75
SIX3-201ENST00000260653 PELP1Q8IZL8 1130 aaKnown RBP32.21■■■□□ 2.75
SIX3-201ENST00000260653 UNC13BO14795 1591 aa32.2■■■□□ 2.75
SIX3-201ENST00000260653 ATP7AQ04656 1500 aa32.2■■■□□ 2.75
SIX3-201ENST00000260653 RPRD2Q5VT52 1461 aaKnown RBP32.18■■■□□ 2.74
SIX3-201ENST00000260653 FAM135AQ9P2D6 1515 aa32.17■■■□□ 2.74
SIX3-201ENST00000260653 DIEXFQ68CQ4 756 aaKnown RBP32.17■■■□□ 2.74
SIX3-201ENST00000260653 MAP3K4Q9Y6R4 1608 aa32.14■■■□□ 2.74
SIX3-201ENST00000260653 ZNF518AQ6AHZ1 1483 aa32.13■■■□□ 2.73
SIX3-201ENST00000260653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.11■■■□□ 2.73
SIX3-201ENST00000260653 GLI2P10070 1586 aa32.11■■■□□ 2.73
SIX3-201ENST00000260653 MAGI2Q86UL8 1455 aa32.09■■■□□ 2.73
SIX3-201ENST00000260653 MYT1LQ9UL68 1186 aa32.09■■■□□ 2.73
SIX3-201ENST00000260653 POGZQ7Z3K3 1410 aa32.09■■■□□ 2.73
SIX3-201ENST00000260653 NEO1Q92859 1461 aa32.09■■■□□ 2.73
SIX3-201ENST00000260653 IQGAP3Q86VI3 1631 aa32.08■■■□□ 2.73
SIX3-201ENST00000260653 KIDINS220Q9ULH0 1771 aa32.07■■■□□ 2.72
SIX3-201ENST00000260653 DIP2BQ9P265 1576 aa32.07■■■□□ 2.72
SIX3-201ENST00000260653 L3MBTL2Q969R5 705 aa32.05■■■□□ 2.72
SIX3-201ENST00000260653 KDM5CP41229 1560 aa32.05■■■□□ 2.72
SIX3-201ENST00000260653 TEX14Q8IWB6 1497 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms