RNA–Protein interactions for RNA: ENST00000258229.13

PCNX2-201, Transcript of pecanex 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PCNX2, Length 7,518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-201ENST00000258229 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
PCNX2-201ENST00000258229 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
PCNX2-201ENST00000258229 MARCH6O60337 910 aa20.31■□□□□ 0.84
PCNX2-201ENST00000258229 MCCP23508 829 aa20.31■□□□□ 0.84
PCNX2-201ENST00000258229 FRAT2O75474 233 aaPredicted RBP20.3■□□□□ 0.84
PCNX2-201ENST00000258229 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
PCNX2-201ENST00000258229 MIER1Q8N108 512 aa20.29■□□□□ 0.84
PCNX2-201ENST00000258229 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
PCNX2-201ENST00000258229 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
PCNX2-201ENST00000258229 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
PCNX2-201ENST00000258229 GOLGA6L1Q8N7Z2 621 aa20.26■□□□□ 0.83
PCNX2-201ENST00000258229 STK26Q9P289 416 aa20.26■□□□□ 0.83
PCNX2-201ENST00000258229 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
PCNX2-201ENST00000258229 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
PCNX2-201ENST00000258229 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
PCNX2-201ENST00000258229 MTUS2Q5JR59 1369 aa20.24■□□□□ 0.83
PCNX2-201ENST00000258229 CARD11Q9BXL7 1154 aa20.21■□□□□ 0.83
PCNX2-201ENST00000258229 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
PCNX2-201ENST00000258229 GTF2E1P29083 439 aaPredicted RBP20.2■□□□□ 0.82
PCNX2-201ENST00000258229 FOXD4L5Q5VV16 416 aaPredicted RBP20.2■□□□□ 0.82
PCNX2-201ENST00000258229 FOXD4L4Q8WXT5 416 aaPredicted RBP20.2■□□□□ 0.82
PCNX2-201ENST00000258229 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
PCNX2-201ENST00000258229 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
PCNX2-201ENST00000258229 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
PCNX2-201ENST00000258229 CCAR2Q8N163 923 aaKnown RBP20.16■□□□□ 0.82
PCNX2-201ENST00000258229 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.82
PCNX2-201ENST00000258229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.14■□□□□ 0.81
PCNX2-201ENST00000258229 FBXW7Q969H0 707 aa20.14■□□□□ 0.81
PCNX2-201ENST00000258229 NOP58Q9Y2X3 529 aaKnown RBP20.13■□□□□ 0.81
PCNX2-201ENST00000258229 TPM4P67936 248 aa20.13■□□□□ 0.81
PCNX2-201ENST00000258229 TPD52L1Q16890 204 aaPredicted RBP20.11■□□□□ 0.81
PCNX2-201ENST00000258229 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
PCNX2-201ENST00000258229 FOXD4L6Q3SYB3 417 aaPredicted RBP20.1■□□□□ 0.81
PCNX2-201ENST00000258229 FOXD4L3Q6VB84 417 aaPredicted RBP20.1■□□□□ 0.81
PCNX2-201ENST00000258229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.81
PCNX2-201ENST00000258229 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
PCNX2-201ENST00000258229 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
PCNX2-201ENST00000258229 PTMSP20962 102 aa20.07■□□□□ 0.8
PCNX2-201ENST00000258229 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
PCNX2-201ENST00000258229 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
PCNX2-201ENST00000258229 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
PCNX2-201ENST00000258229 TPM3P06753 285 aa20.05■□□□□ 0.8
PCNX2-201ENST00000258229 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
PCNX2-201ENST00000258229 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
PCNX2-201ENST00000258229 BCL11BQ9C0K0 894 aaPredicted RBP20.04■□□□□ 0.8
PCNX2-201ENST00000258229 NUTM2FA1L443 756 aa20.04■□□□□ 0.8
PCNX2-201ENST00000258229 TRIM34Q9BYJ4 488 aa20.03■□□□□ 0.8
PCNX2-201ENST00000258229 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
PCNX2-201ENST00000258229 CALRP27797 417 aaKnown RBP20.01■□□□□ 0.79
PCNX2-201ENST00000258229 NGEFQ8N5V2 710 aa20■□□□□ 0.79
PCNX2-201ENST00000258229 SF3A1Q15459 793 aaKnown RBP20■□□□□ 0.79
PCNX2-201ENST00000258229 MORC1Q86VD1 984 aa20■□□□□ 0.79
PCNX2-201ENST00000258229 PCMTD1Q96MG8 357 aaPredicted RBP20■□□□□ 0.79
PCNX2-201ENST00000258229 MS4A1P11836 297 aa19.98■□□□□ 0.79
PCNX2-201ENST00000258229 SETQ01105 290 aaPredicted RBP19.98■□□□□ 0.79
PCNX2-201ENST00000258229 PAF1Q8N7H5 531 aa19.97■□□□□ 0.79
PCNX2-201ENST00000258229 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
PCNX2-201ENST00000258229 MFAP1P55081 439 aaKnown RBP19.95■□□□□ 0.78
PCNX2-201ENST00000258229 RRP12Q5JTH9 1297 aaKnown RBP19.95■□□□□ 0.78
PCNX2-201ENST00000258229 GPATCH3Q96I76 525 aa19.95■□□□□ 0.78
PCNX2-201ENST00000258229 TSR1Q2NL82 804 aaKnown RBP19.95■□□□□ 0.78
PCNX2-201ENST00000258229 CCDC34Q96HJ3 373 aa19.95■□□□□ 0.78
PCNX2-201ENST00000258229 DHX16O60231 1041 aaKnown RBP19.93■□□□□ 0.78
PCNX2-201ENST00000258229 MEX3CQ5U5Q3 659 aaKnown RBP19.93■□□□□ 0.78
PCNX2-201ENST00000258229 DEKP35659 375 aaKnown RBP19.93■□□□□ 0.78
PCNX2-201ENST00000258229 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
PCNX2-201ENST00000258229 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
PCNX2-201ENST00000258229 GGT6Q6P531 493 aa19.91■□□□□ 0.78
PCNX2-201ENST00000258229 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
PCNX2-201ENST00000258229 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
PCNX2-201ENST00000258229 NUTM2DQ5VT03 806 aaPredicted RBP19.9■□□□□ 0.78
PCNX2-201ENST00000258229 GBP4Q96PP9 640 aa19.9■□□□□ 0.78
PCNX2-201ENST00000258229 ZFYVE27Q5T4F4 411 aa19.9■□□□□ 0.78
PCNX2-201ENST00000258229 ZNF592Q92610 1267 aa19.89■□□□□ 0.77
PCNX2-201ENST00000258229 H3BQV1 296 aa19.89■□□□□ 0.77
PCNX2-201ENST00000258229 EVA1CP58658 441 aa19.89■□□□□ 0.77
PCNX2-201ENST00000258229 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
PCNX2-201ENST00000258229 PPP1R1BQ9UD71 204 aaPredicted RBP19.88■□□□□ 0.77
PCNX2-201ENST00000258229 AKAP17AQ02040 695 aaKnown RBP19.87■□□□□ 0.77
PCNX2-201ENST00000258229 MCTP1Q6DN14 999 aa19.87■□□□□ 0.77
PCNX2-201ENST00000258229 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
PCNX2-201ENST00000258229 SKIDA1Q1XH10 827 aa19.87■□□□□ 0.77
PCNX2-201ENST00000258229 SLC4A3P48751 1232 aa19.87■□□□□ 0.77
PCNX2-201ENST00000258229 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
PCNX2-201ENST00000258229 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
PCNX2-201ENST00000258229 MTMR7Q9Y216 660 aa19.86■□□□□ 0.77
PCNX2-201ENST00000258229 CCDC43Q96MW1 224 aaKnown RBP19.85■□□□□ 0.77
PCNX2-201ENST00000258229 PPP4R2Q9NY27 417 aa19.85■□□□□ 0.77
PCNX2-201ENST00000258229 FOSBP53539 338 aa19.84■□□□□ 0.77
PCNX2-201ENST00000258229 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
PCNX2-201ENST00000258229 ODF2Q5BJF6 829 aa19.84■□□□□ 0.77
PCNX2-201ENST00000258229 STK31Q9BXU1 1019 aa19.83■□□□□ 0.77
PCNX2-201ENST00000258229 TPM2P07951 284 aa19.83■□□□□ 0.76
PCNX2-201ENST00000258229 RILPL2Q969X0 211 aa19.83■□□□□ 0.76
PCNX2-201ENST00000258229 NAP1L1P55209 391 aaKnown RBP19.82■□□□□ 0.76
PCNX2-201ENST00000258229 DHX37Q8IY37 1157 aaKnown RBP19.82■□□□□ 0.76
PCNX2-201ENST00000258229 KDM4AO75164 1064 aa19.82■□□□□ 0.76
PCNX2-201ENST00000258229 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
PCNX2-201ENST00000258229 DCAF8L1A6NGE4 600 aa19.82■□□□□ 0.76
PCNX2-201ENST00000258229 CT47A1Q5JQC4 288 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms