RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
NOTCH2-201ENST00000256646 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
NOTCH2-201ENST00000256646 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
NOTCH2-201ENST00000256646 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
NOTCH2-201ENST00000256646 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
NOTCH2-201ENST00000256646 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
NOTCH2-201ENST00000256646 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
NOTCH2-201ENST00000256646 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
NOTCH2-201ENST00000256646 DEKP35659 375 aaKnown RBP12.66□□□□□ -0.38
NOTCH2-201ENST00000256646 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
NOTCH2-201ENST00000256646 NRDCO43847 1150 aa12.65□□□□□ -0.38
NOTCH2-201ENST00000256646 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
NOTCH2-201ENST00000256646 MCCP23508 829 aa12.65□□□□□ -0.38
NOTCH2-201ENST00000256646 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
NOTCH2-201ENST00000256646 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
NOTCH2-201ENST00000256646 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
NOTCH2-201ENST00000256646 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
NOTCH2-201ENST00000256646 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
NOTCH2-201ENST00000256646 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
NOTCH2-201ENST00000256646 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
NOTCH2-201ENST00000256646 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
NOTCH2-201ENST00000256646 GGT6Q6P531 493 aa12.61□□□□□ -0.39
NOTCH2-201ENST00000256646 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
NOTCH2-201ENST00000256646 GORABQ5T7V8 394 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 G3V3G9 751 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 TMF1P82094 1093 aa12.59□□□□□ -0.39
NOTCH2-201ENST00000256646 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.39
NOTCH2-201ENST00000256646 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.39
NOTCH2-201ENST00000256646 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
NOTCH2-201ENST00000256646 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
NOTCH2-201ENST00000256646 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
NOTCH2-201ENST00000256646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
NOTCH2-201ENST00000256646 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
NOTCH2-201ENST00000256646 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
NOTCH2-201ENST00000256646 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
NOTCH2-201ENST00000256646 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
NOTCH2-201ENST00000256646 MS4A1P11836 297 aa12.54□□□□□ -0.4
NOTCH2-201ENST00000256646 L1TD1Q5T7N2 865 aaKnown RBP12.54□□□□□ -0.4
NOTCH2-201ENST00000256646 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
NOTCH2-201ENST00000256646 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
NOTCH2-201ENST00000256646 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
NOTCH2-201ENST00000256646 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
NOTCH2-201ENST00000256646 RAD21O60216 631 aa12.52□□□□□ -0.4
NOTCH2-201ENST00000256646 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.4
NOTCH2-201ENST00000256646 KANK1Q14678 1352 aa12.52□□□□□ -0.41
NOTCH2-201ENST00000256646 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
NOTCH2-201ENST00000256646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.51□□□□□ -0.41
NOTCH2-201ENST00000256646 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
NOTCH2-201ENST00000256646 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
NOTCH2-201ENST00000256646 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
NOTCH2-201ENST00000256646 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
NOTCH2-201ENST00000256646 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
NOTCH2-201ENST00000256646 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
NOTCH2-201ENST00000256646 MSH5O43196 834 aa12.5□□□□□ -0.41
NOTCH2-201ENST00000256646 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
NOTCH2-201ENST00000256646 MARCH6O60337 910 aa12.48□□□□□ -0.41
NOTCH2-201ENST00000256646 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
NOTCH2-201ENST00000256646 CCDC180Q9P1Z9 1646 aa12.47□□□□□ -0.41
NOTCH2-201ENST00000256646 GBP4Q96PP9 640 aa12.46□□□□□ -0.41
NOTCH2-201ENST00000256646 SMC4Q9NTJ3 1288 aa12.46□□□□□ -0.41
NOTCH2-201ENST00000256646 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
NOTCH2-201ENST00000256646 FBXW7Q969H0 707 aa12.46□□□□□ -0.42
NOTCH2-201ENST00000256646 TNNT3P45378 269 aaPredicted RBP12.46□□□□□ -0.42
NOTCH2-201ENST00000256646 CCAR2Q8N163 923 aaKnown RBP12.46□□□□□ -0.42
NOTCH2-201ENST00000256646 RCAN3Q9UKA8 241 aa12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 FOSBP53539 338 aa12.45□□□□□ -0.42
NOTCH2-201ENST00000256646 KTN1Q86UP2 1357 aaKnown RBP12.44□□□□□ -0.42
NOTCH2-201ENST00000256646 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
NOTCH2-201ENST00000256646 PKD2Q13563 968 aa12.44□□□□□ -0.42
NOTCH2-201ENST00000256646 TPM4P67936 248 aa12.44□□□□□ -0.42
NOTCH2-201ENST00000256646 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
NOTCH2-201ENST00000256646 RILPL2Q969X0 211 aa12.43□□□□□ -0.42
NOTCH2-201ENST00000256646 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
NOTCH2-201ENST00000256646 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
NOTCH2-201ENST00000256646 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
NOTCH2-201ENST00000256646 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
NOTCH2-201ENST00000256646 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
NOTCH2-201ENST00000256646 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
NOTCH2-201ENST00000256646 TPD52L1Q16890 204 aaPredicted RBP12.41□□□□□ -0.42
NOTCH2-201ENST00000256646 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
NOTCH2-201ENST00000256646 KDM4AO75164 1064 aa12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 SPAG9O60271 1321 aaKnown RBP12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 AMPHP49418 695 aa12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
NOTCH2-201ENST00000256646 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
NOTCH2-201ENST00000256646 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
NOTCH2-201ENST00000256646 H3BQV1 296 aa12.38□□□□□ -0.43
NOTCH2-201ENST00000256646 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
NOTCH2-201ENST00000256646 KIF27Q86VH2 1401 aa12.38□□□□□ -0.43
NOTCH2-201ENST00000256646 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms