RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SYNJ2O15056 1496 aa30.45■■■□□ 2.46
SH2D3A-201ENST00000245908 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
SH2D3A-201ENST00000245908 TROQ12816 1431 aaPredicted RBP30.42■■■□□ 2.46
SH2D3A-201ENST00000245908 ITSN2Q9NZM3 1697 aa30.41■■■□□ 2.46
SH2D3A-201ENST00000245908 ADCY10Q96PN6 1610 aa30.4■■■□□ 2.46
SH2D3A-201ENST00000245908 ZNF644Q9H582 1327 aaPredicted RBP30.37■■■□□ 2.45
SH2D3A-201ENST00000245908 ANKRD30BQ9BXX2 1392 aa30.36■■■□□ 2.45
SH2D3A-201ENST00000245908 PRG4Q92954 1404 aaPredicted RBP30.36■■■□□ 2.45
SH2D3A-201ENST00000245908 RPRD2Q5VT52 1461 aaKnown RBP30.36■■■□□ 2.45
SH2D3A-201ENST00000245908 HSPA5P11021 654 aaKnown RBP30.35■■■□□ 2.45
SH2D3A-201ENST00000245908 CHMP7Q8WUX9 453 aaPredicted RBP30.34■■■□□ 2.45
SH2D3A-201ENST00000245908 CAMSAP2Q08AD1 1489 aa30.34■■■□□ 2.45
SH2D3A-201ENST00000245908 PLB1Q6P1J6 1458 aa30.34■■■□□ 2.45
SH2D3A-201ENST00000245908 ADGBQ8N7X0 1667 aa30.34■■■□□ 2.45
SH2D3A-201ENST00000245908 NUP160Q12769 1436 aa30.33■■■□□ 2.45
SH2D3A-201ENST00000245908 L3MBTL2Q969R5 705 aa30.32■■■□□ 2.44
SH2D3A-201ENST00000245908 WASHC2AQ641Q2 1341 aa30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 EIF4G2P78344 907 aaKnown RBP eCLIP30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 KIF14Q15058 1648 aa30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 FOXD1Q16676 465 aa30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 CARMIL2Q6F5E8 1435 aa30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 TEX14Q8IWB6 1497 aa30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 GPATCH8Q9UKJ3 1502 aaKnown RBP30.3■■■□□ 2.44
SH2D3A-201ENST00000245908 CROCC2H7BZ55 1655 aa30.29■■■□□ 2.44
SH2D3A-201ENST00000245908 ADGRL2O95490 1459 aa30.26■■■□□ 2.43
SH2D3A-201ENST00000245908 CFDP1Q9UEE9 299 aaPredicted RBP30.24■■■□□ 2.43
SH2D3A-201ENST00000245908 NCOA1Q15788 1441 aa30.23■■■□□ 2.43
SH2D3A-201ENST00000245908 PZPP20742 1482 aa30.23■■■□□ 2.43
SH2D3A-201ENST00000245908 JPH4Q96JJ6 628 aa30.21■■■□□ 2.43
SH2D3A-201ENST00000245908 SLC4A1APQ9BWU0 796 aaKnown RBP30.21■■■□□ 2.43
SH2D3A-201ENST00000245908 ABCA8O94911 1581 aa30.2■■■□□ 2.42
SH2D3A-201ENST00000245908 CNTLNQ9NXG0 1405 aa30.19■■■□□ 2.42
SH2D3A-201ENST00000245908 FBLN2P98095 1184 aa30.16■■■□□ 2.42
SH2D3A-201ENST00000245908 FKBP8Q14318 412 aa30.16■■■□□ 2.42
SH2D3A-201ENST00000245908 NBPF8Q3BBV2 869 aa30.15■■■□□ 2.42
SH2D3A-201ENST00000245908 POLR1AO95602 1720 aaPredicted RBP30.14■■■□□ 2.42
SH2D3A-201ENST00000245908 CDC42BPAQ5VT25 1732 aa30.14■■■□□ 2.42
SH2D3A-201ENST00000245908 CCDC7Q96M83 1385 aa30.13■■■□□ 2.41
SH2D3A-201ENST00000245908 ABCC10Q5T3U5 1492 aa30.1■■■□□ 2.41
SH2D3A-201ENST00000245908 SPATA31E1Q6ZUB1 1445 aa30.1■■■□□ 2.41
SH2D3A-201ENST00000245908 ANKRD30AQ9BXX3 1397 aa30.1■■■□□ 2.41
SH2D3A-201ENST00000245908 KIAA1107Q9UPP5 1409 aa30.09■■■□□ 2.41
SH2D3A-201ENST00000245908 NEFLP07196 543 aa30.08■■■□□ 2.41
SH2D3A-201ENST00000245908 MBD5Q9P267 1494 aa30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 SHANK2Q9UPX8 1470 aa30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 TSHZ2Q9NRE2 1034 aa30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 ATP10BO94823 1461 aa30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 C11orf95C9JLR9 678 aaPredicted RBP30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 ANP32EQ9BTT0 268 aa30.07■■■□□ 2.4
SH2D3A-201ENST00000245908 PLEKHD1A6NEE1 506 aa30.04■■■□□ 2.4
SH2D3A-201ENST00000245908 BCANQ96GW7 911 aa30.04■■■□□ 2.4
SH2D3A-201ENST00000245908 ANKRD50Q9ULJ7 1429 aa30.02■■■□□ 2.4
SH2D3A-201ENST00000245908 HNRNPUQ00839 825 aaKnown RBP eCLIP29.98■■■□□ 2.39
SH2D3A-201ENST00000245908 C9orf84Q5VXU9 1444 aa29.98■■■□□ 2.39
SH2D3A-201ENST00000245908 PRKRIP1Q9H875 184 aaPredicted RBP29.96■■■□□ 2.39
SH2D3A-201ENST00000245908 KIF7Q2M1P5 1343 aa29.95■■■□□ 2.39
SH2D3A-201ENST00000245908 KDM5DQ9BY66 1539 aa29.95■■■□□ 2.39
SH2D3A-201ENST00000245908 PKD2Q13563 968 aa29.94■■■□□ 2.38
SH2D3A-201ENST00000245908 ARHGEF5Q12774 1597 aa29.94■■■□□ 2.38
SH2D3A-201ENST00000245908 CCDC184Q52MB2 194 aa29.87■■■□□ 2.37
SH2D3A-201ENST00000245908 UHRF1BP1Q6BDS2 1440 aa29.86■■■□□ 2.37
SH2D3A-201ENST00000245908 PTPRGP23470 1445 aa29.86■■■□□ 2.37
SH2D3A-201ENST00000245908 KDM5CP41229 1560 aa29.85■■■□□ 2.37
SH2D3A-201ENST00000245908 NUP155O75694 1391 aa29.85■■■□□ 2.37
SH2D3A-201ENST00000245908 PREX2Q70Z35 1606 aa29.84■■■□□ 2.37
SH2D3A-201ENST00000245908 ARHGEF12Q9NZN5 1544 aa29.84■■■□□ 2.37
SH2D3A-201ENST00000245908 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
SH2D3A-201ENST00000245908 USP47Q96K76 1375 aa29.83■■■□□ 2.37
SH2D3A-201ENST00000245908 TSPY4P0CV99 314 aa29.83■■■□□ 2.37
SH2D3A-201ENST00000245908 TSPY10P0CW01 314 aa29.83■■■□□ 2.37
SH2D3A-201ENST00000245908 CDC42BPBQ9Y5S2 1711 aa29.82■■■□□ 2.36
SH2D3A-201ENST00000245908 SAMD9LQ8IVG5 1584 aa29.81■■■□□ 2.36
SH2D3A-201ENST00000245908 RALGAPBQ86X10 1494 aa29.81■■■□□ 2.36
SH2D3A-201ENST00000245908 KIF15Q9NS87 1388 aa29.8■■■□□ 2.36
SH2D3A-201ENST00000245908 BCL11AQ9H165 835 aa29.79■■■□□ 2.36
SH2D3A-201ENST00000245908 CCDC141Q6ZP82 1450 aa29.78■■■□□ 2.36
SH2D3A-201ENST00000245908 MRS2Q9HD23 443 aa29.78■■■□□ 2.36
SH2D3A-201ENST00000245908 CHD1O14646 1710 aa29.77■■■□□ 2.36
SH2D3A-201ENST00000245908 ARID4BQ4LE39 1312 aaPredicted RBP29.76■■■□□ 2.36
SH2D3A-201ENST00000245908 HNRNPMP52272 730 aaKnown RBP eCLIP29.76■■■□□ 2.35
SH2D3A-201ENST00000245908 DHX29Q7Z478 1369 aaKnown RBP29.75■■■□□ 2.35
SH2D3A-201ENST00000245908 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
SH2D3A-201ENST00000245908 ZNF326Q5BKZ1 582 aaKnown RBP29.73■■■□□ 2.35
SH2D3A-201ENST00000245908 ZBED9Q6R2W3 1325 aa29.7■■■□□ 2.35
SH2D3A-201ENST00000245908 FAM9BQ8IZU0 186 aa29.7■■■□□ 2.35
SH2D3A-201ENST00000245908 RSPH4AQ5TD94 716 aa29.7■■■□□ 2.34
SH2D3A-201ENST00000245908 MAST1Q9Y2H9 1570 aa29.68■■■□□ 2.34
SH2D3A-201ENST00000245908 FAM135AQ9P2D6 1515 aa29.67■■■□□ 2.34
SH2D3A-201ENST00000245908 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
SH2D3A-201ENST00000245908 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.34
SH2D3A-201ENST00000245908 ERICH6BQ5W0A0 696 aa29.64■■■□□ 2.34
SH2D3A-201ENST00000245908 SYCP2Q9BX26 1530 aa29.63■■■□□ 2.33
SH2D3A-201ENST00000245908 UNC13BO14795 1591 aa29.62■■■□□ 2.33
SH2D3A-201ENST00000245908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.62■■■□□ 2.33
SH2D3A-201ENST00000245908 CARD11Q9BXL7 1154 aa29.61■■■□□ 2.33
SH2D3A-201ENST00000245908 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
SH2D3A-201ENST00000245908 ABCC2Q92887 1545 aa29.59■■■□□ 2.33
SH2D3A-201ENST00000245908 MYO5CQ9NQX4 1742 aa29.58■■■□□ 2.33
SH2D3A-201ENST00000245908 PLXNC1O60486 1568 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms