RNA–Protein interactions for RNA: ENST00000229866.10

RNF8-201, Transcript of ring finger protein 8, humanhuman

TSL 2

Gene RNF8, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-201ENST00000229866 ADCY10Q96PN6 1610 aa30.63■■■□□ 2.49
RNF8-201ENST00000229866 PLB1Q6P1J6 1458 aa30.62■■■□□ 2.49
RNF8-201ENST00000229866 DENND4BO75064 1496 aaPredicted RBP30.6■■■□□ 2.49
RNF8-201ENST00000229866 MPHOSPH9Q99550 1183 aa30.59■■■□□ 2.49
RNF8-201ENST00000229866 KDM5BQ9UGL1 1544 aa30.59■■■□□ 2.49
RNF8-201ENST00000229866 PRG4Q92954 1404 aaPredicted RBP30.59■■■□□ 2.49
RNF8-201ENST00000229866 CAMSAP2Q08AD1 1489 aa30.53■■■□□ 2.48
RNF8-201ENST00000229866 CFDP1Q9UEE9 299 aaPredicted RBP30.52■■■□□ 2.48
RNF8-201ENST00000229866 GPATCH8Q9UKJ3 1502 aaKnown RBP30.52■■■□□ 2.48
RNF8-201ENST00000229866 ZNF644Q9H582 1327 aaPredicted RBP30.51■■■□□ 2.48
RNF8-201ENST00000229866 ABCA8O94911 1581 aa30.51■■■□□ 2.48
RNF8-201ENST00000229866 ADGBQ8N7X0 1667 aa30.47■■■□□ 2.47
RNF8-201ENST00000229866 KIF14Q15058 1648 aa30.47■■■□□ 2.47
RNF8-201ENST00000229866 HIRIP3Q9BW71 556 aaPredicted RBP30.47■■■□□ 2.47
RNF8-201ENST00000229866 CCER2I3L3R5 266 aa30.46■■■□□ 2.47
RNF8-201ENST00000229866 ANP32CO43423 234 aa30.45■■■□□ 2.47
RNF8-201ENST00000229866 ADGRL2O95490 1459 aa30.43■■■□□ 2.46
RNF8-201ENST00000229866 PLEKHD1A6NEE1 506 aa30.43■■■□□ 2.46
RNF8-201ENST00000229866 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
RNF8-201ENST00000229866 CROCC2H7BZ55 1655 aa30.41■■■□□ 2.46
RNF8-201ENST00000229866 NCOA1Q15788 1441 aa30.4■■■□□ 2.46
RNF8-201ENST00000229866 RPRD2Q5VT52 1461 aaKnown RBP30.39■■■□□ 2.46
RNF8-201ENST00000229866 ATP10BO94823 1461 aa30.38■■■□□ 2.45
RNF8-201ENST00000229866 KCNH8Q96L42 1107 aa30.35■■■□□ 2.45
RNF8-201ENST00000229866 ANKRD30AQ9BXX3 1397 aa30.35■■■□□ 2.45
RNF8-201ENST00000229866 SLC4A1APQ9BWU0 796 aaKnown RBP30.35■■■□□ 2.45
RNF8-201ENST00000229866 ABCC10Q5T3U5 1492 aa30.35■■■□□ 2.45
RNF8-201ENST00000229866 L3MBTL2Q969R5 705 aa30.33■■■□□ 2.45
RNF8-201ENST00000229866 ZNF777Q9ULD5 760 aaPredicted RBP30.32■■■□□ 2.44
RNF8-201ENST00000229866 SHANK2Q9UPX8 1470 aa30.31■■■□□ 2.44
RNF8-201ENST00000229866 CDC42BPAQ5VT25 1732 aa30.31■■■□□ 2.44
RNF8-201ENST00000229866 EIF4G2P78344 907 aaKnown RBP eCLIP30.31■■■□□ 2.44
RNF8-201ENST00000229866 FOXD1Q16676 465 aa30.3■■■□□ 2.44
RNF8-201ENST00000229866 PTPRGP23470 1445 aa30.29■■■□□ 2.44
RNF8-201ENST00000229866 PZPP20742 1482 aa30.29■■■□□ 2.44
RNF8-201ENST00000229866 HSPA5P11021 654 aaKnown RBP30.29■■■□□ 2.44
RNF8-201ENST00000229866 TEX14Q8IWB6 1497 aa30.26■■■□□ 2.44
RNF8-201ENST00000229866 KIAA1107Q9UPP5 1409 aa30.21■■■□□ 2.43
RNF8-201ENST00000229866 ANKRD50Q9ULJ7 1429 aa30.2■■■□□ 2.43
RNF8-201ENST00000229866 CHD1O14646 1710 aa30.19■■■□□ 2.42
RNF8-201ENST00000229866 C9orf84Q5VXU9 1444 aa30.19■■■□□ 2.42
RNF8-201ENST00000229866 ARHGEF5Q12774 1597 aa30.18■■■□□ 2.42
RNF8-201ENST00000229866 WASHC2AQ641Q2 1341 aa30.17■■■□□ 2.42
RNF8-201ENST00000229866 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
RNF8-201ENST00000229866 SUPT16HQ9Y5B9 1047 aaKnown RBP30.16■■■□□ 2.42
RNF8-201ENST00000229866 TSPY4P0CV99 314 aa30.15■■■□□ 2.42
RNF8-201ENST00000229866 TSPY10P0CW01 314 aa30.15■■■□□ 2.42
RNF8-201ENST00000229866 NBPF8Q3BBV2 869 aa30.1■■■□□ 2.41
RNF8-201ENST00000229866 KDM5DQ9BY66 1539 aa30.09■■■□□ 2.41
RNF8-201ENST00000229866 RSPH4AQ5TD94 716 aa30.09■■■□□ 2.41
RNF8-201ENST00000229866 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
RNF8-201ENST00000229866 PREX2Q70Z35 1606 aa30.08■■■□□ 2.41
RNF8-201ENST00000229866 PKD2Q13563 968 aa30.08■■■□□ 2.41
RNF8-201ENST00000229866 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
RNF8-201ENST00000229866 CCDC7Q96M83 1385 aa30.05■■■□□ 2.4
RNF8-201ENST00000229866 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
RNF8-201ENST00000229866 NUP155O75694 1391 aa30.03■■■□□ 2.4
RNF8-201ENST00000229866 SPATA31E1Q6ZUB1 1445 aa30.03■■■□□ 2.4
RNF8-201ENST00000229866 KIF15Q9NS87 1388 aa30.02■■■□□ 2.4
RNF8-201ENST00000229866 SAMD9LQ8IVG5 1584 aa30.02■■■□□ 2.4
RNF8-201ENST00000229866 CDC42BPBQ9Y5S2 1711 aa30.01■■■□□ 2.4
RNF8-201ENST00000229866 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
RNF8-201ENST00000229866 POLR1AO95602 1720 aaPredicted RBP30■■■□□ 2.39
RNF8-201ENST00000229866 ABCC2Q92887 1545 aa29.99■■■□□ 2.39
RNF8-201ENST00000229866 ARHGEF12Q9NZN5 1544 aa29.93■■■□□ 2.38
RNF8-201ENST00000229866 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
RNF8-201ENST00000229866 C11orf95C9JLR9 678 aaPredicted RBP29.92■■■□□ 2.38
RNF8-201ENST00000229866 PLEKHH2Q8IVE3 1493 aa29.92■■■□□ 2.38
RNF8-201ENST00000229866 UHRF1BP1Q6BDS2 1440 aa29.92■■■□□ 2.38
RNF8-201ENST00000229866 ARHGAP5Q13017 1502 aa29.9■■■□□ 2.38
RNF8-201ENST00000229866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
RNF8-201ENST00000229866 TTC37Q6PGP7 1564 aa29.89■■■□□ 2.38
RNF8-201ENST00000229866 KIF7Q2M1P5 1343 aa29.88■■■□□ 2.37
RNF8-201ENST00000229866 MYO5CQ9NQX4 1742 aa29.86■■■□□ 2.37
RNF8-201ENST00000229866 SYCP2Q9BX26 1530 aa29.86■■■□□ 2.37
RNF8-201ENST00000229866 NEFLP07196 543 aa29.85■■■□□ 2.37
RNF8-201ENST00000229866 ERCC6L2Q5T890 1561 aa29.85■■■□□ 2.37
RNF8-201ENST00000229866 ARID4BQ4LE39 1312 aaPredicted RBP29.84■■■□□ 2.37
RNF8-201ENST00000229866 USP47Q96K76 1375 aa29.84■■■□□ 2.37
RNF8-201ENST00000229866 RALGAPBQ86X10 1494 aa29.84■■■□□ 2.37
RNF8-201ENST00000229866 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
RNF8-201ENST00000229866 UHRF1BP1LA0JNW5 1464 aa29.83■■■□□ 2.37
RNF8-201ENST00000229866 PRKRIP1Q9H875 184 aaPredicted RBP29.83■■■□□ 2.37
RNF8-201ENST00000229866 FAM135AQ9P2D6 1515 aa29.82■■■□□ 2.36
RNF8-201ENST00000229866 OSCARQ8IYS5 282 aa29.82■■■□□ 2.36
RNF8-201ENST00000229866 PLXNC1O60486 1568 aa29.8■■■□□ 2.36
RNF8-201ENST00000229866 KDM5CP41229 1560 aa29.8■■■□□ 2.36
RNF8-201ENST00000229866 UNC13BO14795 1591 aa29.79■■■□□ 2.36
RNF8-201ENST00000229866 ZNF326Q5BKZ1 582 aaKnown RBP29.78■■■□□ 2.36
RNF8-201ENST00000229866 FKBP8Q14318 412 aa29.78■■■□□ 2.36
RNF8-201ENST00000229866 HNRNPUQ00839 825 aaKnown RBP eCLIP29.77■■■□□ 2.36
RNF8-201ENST00000229866 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
RNF8-201ENST00000229866 PLCH2O75038 1416 aa29.73■■■□□ 2.35
RNF8-201ENST00000229866 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
RNF8-201ENST00000229866 ROCK2O75116 1388 aaKnown RBP29.7■■■□□ 2.34
RNF8-201ENST00000229866 BCORL1Q5H9F3 1711 aa29.7■■■□□ 2.34
RNF8-201ENST00000229866 EFCAB2Q5VUJ9 269 aa29.68■■■□□ 2.34
RNF8-201ENST00000229866 CARD11Q9BXL7 1154 aa29.68■■■□□ 2.34
RNF8-201ENST00000229866 IQGAP3Q86VI3 1631 aa29.67■■■□□ 2.34
RNF8-201ENST00000229866 CCDC144AA2RUR9 1427 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms