RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.53■□□□□ 0.24
TM9SF4-201ENST00000217315 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
TM9SF4-201ENST00000217315 NAIPQ13075 1403 aa16.52■□□□□ 0.23
TM9SF4-201ENST00000217315 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.23
TM9SF4-201ENST00000217315 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
TM9SF4-201ENST00000217315 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
TM9SF4-201ENST00000217315 RBM19Q9Y4C8 960 aaKnown RBP16.49■□□□□ 0.23
TM9SF4-201ENST00000217315 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
TM9SF4-201ENST00000217315 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
TM9SF4-201ENST00000217315 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
TM9SF4-201ENST00000217315 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
TM9SF4-201ENST00000217315 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
TM9SF4-201ENST00000217315 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
TM9SF4-201ENST00000217315 CUL7Q14999 1698 aa16.46■□□□□ 0.23
TM9SF4-201ENST00000217315 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
TM9SF4-201ENST00000217315 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
TM9SF4-201ENST00000217315 PTPRGP23470 1445 aa16.45■□□□□ 0.22
TM9SF4-201ENST00000217315 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
TM9SF4-201ENST00000217315 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
TM9SF4-201ENST00000217315 MAPKBP1O60336 1514 aa16.44■□□□□ 0.22
TM9SF4-201ENST00000217315 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
TM9SF4-201ENST00000217315 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
TM9SF4-201ENST00000217315 USP47Q96K76 1375 aa16.43■□□□□ 0.22
TM9SF4-201ENST00000217315 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
TM9SF4-201ENST00000217315 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
TM9SF4-201ENST00000217315 TMF1P82094 1093 aa16.42■□□□□ 0.22
TM9SF4-201ENST00000217315 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
TM9SF4-201ENST00000217315 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
TM9SF4-201ENST00000217315 SUPT6HQ7KZ85 1726 aaKnown RBP16.41■□□□□ 0.22
TM9SF4-201ENST00000217315 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
TM9SF4-201ENST00000217315 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
TM9SF4-201ENST00000217315 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
TM9SF4-201ENST00000217315 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
TM9SF4-201ENST00000217315 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
TM9SF4-201ENST00000217315 ANKRD50Q9ULJ7 1429 aa16.38■□□□□ 0.21
TM9SF4-201ENST00000217315 NBR1Q14596 966 aa16.38■□□□□ 0.21
TM9SF4-201ENST00000217315 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
TM9SF4-201ENST00000217315 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
TM9SF4-201ENST00000217315 HECW1Q76N89 1606 aa16.37■□□□□ 0.21
TM9SF4-201ENST00000217315 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
TM9SF4-201ENST00000217315 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 DAPK1P53355 1430 aa16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
TM9SF4-201ENST00000217315 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
TM9SF4-201ENST00000217315 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
TM9SF4-201ENST00000217315 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
TM9SF4-201ENST00000217315 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
TM9SF4-201ENST00000217315 RALBP1Q15311 655 aa16.34■□□□□ 0.21
TM9SF4-201ENST00000217315 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
TM9SF4-201ENST00000217315 NUDCQ9Y266 331 aa16.33■□□□□ 0.2
TM9SF4-201ENST00000217315 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
TM9SF4-201ENST00000217315 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
TM9SF4-201ENST00000217315 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
TM9SF4-201ENST00000217315 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
TM9SF4-201ENST00000217315 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
TM9SF4-201ENST00000217315 KIF3BO15066 747 aa16.31■□□□□ 0.2
TM9SF4-201ENST00000217315 SPAG9O60271 1321 aaKnown RBP16.3■□□□□ 0.2
TM9SF4-201ENST00000217315 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
TM9SF4-201ENST00000217315 NLRP13Q86W25 1043 aa16.3■□□□□ 0.2
TM9SF4-201ENST00000217315 NEFMP07197 916 aa16.29■□□□□ 0.2
TM9SF4-201ENST00000217315 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
TM9SF4-201ENST00000217315 GGT6Q6P531 493 aa16.29■□□□□ 0.2
TM9SF4-201ENST00000217315 KANK1Q14678 1352 aa16.28■□□□□ 0.2
TM9SF4-201ENST00000217315 ABCC5O15440 1437 aa16.28■□□□□ 0.2
TM9SF4-201ENST00000217315 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
TM9SF4-201ENST00000217315 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
TM9SF4-201ENST00000217315 PANK3Q9H999 370 aa16.26■□□□□ 0.19
TM9SF4-201ENST00000217315 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
TM9SF4-201ENST00000217315 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
TM9SF4-201ENST00000217315 ROCK1Q13464 1354 aa16.25■□□□□ 0.19
TM9SF4-201ENST00000217315 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
TM9SF4-201ENST00000217315 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
TM9SF4-201ENST00000217315 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
TM9SF4-201ENST00000217315 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
TM9SF4-201ENST00000217315 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
TM9SF4-201ENST00000217315 CTTNBP2Q8WZ74 1663 aa16.22■□□□□ 0.19
TM9SF4-201ENST00000217315 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
TM9SF4-201ENST00000217315 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.18
TM9SF4-201ENST00000217315 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
TM9SF4-201ENST00000217315 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
TM9SF4-201ENST00000217315 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
TM9SF4-201ENST00000217315 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
TM9SF4-201ENST00000217315 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
TM9SF4-201ENST00000217315 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
TM9SF4-201ENST00000217315 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 NOP58Q9Y2X3 529 aaKnown RBP16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 RGS3P49796 1198 aa16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
TM9SF4-201ENST00000217315 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
TM9SF4-201ENST00000217315 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
TM9SF4-201ENST00000217315 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
TM9SF4-201ENST00000217315 MORC1Q86VD1 984 aa16.14■□□□□ 0.17
TM9SF4-201ENST00000217315 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
TM9SF4-201ENST00000217315 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
TM9SF4-201ENST00000217315 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms