RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 APBB1O00213 710 aa21.68■■□□□ 1.06
ITGB4-201ENST00000200181 SLKQ9H2G2 1235 aaPredicted RBP21.68■■□□□ 1.06
ITGB4-201ENST00000200181 GOLGA6L3A6NEY3 463 aa21.67■■□□□ 1.06
ITGB4-201ENST00000200181 A0A0U1RQG5 324 aaPredicted RBP21.67■■□□□ 1.06
ITGB4-201ENST00000200181 IPO8O15397 1037 aaKnown RBP21.64■■□□□ 1.06
ITGB4-201ENST00000200181 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
ITGB4-201ENST00000200181 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
ITGB4-201ENST00000200181 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
ITGB4-201ENST00000200181 CCER2I3L3R5 266 aa21.62■■□□□ 1.05
ITGB4-201ENST00000200181 RWDD1Q9H446 243 aaPredicted RBP21.61■■□□□ 1.05
ITGB4-201ENST00000200181 SOX12O15370 315 aa21.6■■□□□ 1.05
ITGB4-201ENST00000200181 HSP90B1P14625 803 aaKnown RBP21.59■■□□□ 1.05
ITGB4-201ENST00000200181 TCERG1O14776 1098 aaKnown RBP21.59■■□□□ 1.05
ITGB4-201ENST00000200181 PRM3Q9NNZ6 103 aa21.58■■□□□ 1.05
ITGB4-201ENST00000200181 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
ITGB4-201ENST00000200181 SRPK2P78362 688 aaKnown RBP21.57■■□□□ 1.04
ITGB4-201ENST00000200181 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
ITGB4-201ENST00000200181 EEA1Q15075 1411 aa21.56■■□□□ 1.04
ITGB4-201ENST00000200181 CCDC34Q96HJ3 373 aa21.56■■□□□ 1.04
ITGB4-201ENST00000200181 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
ITGB4-201ENST00000200181 CSPP1Q1MSJ5 1256 aa21.55■■□□□ 1.04
ITGB4-201ENST00000200181 PDE4CQ08493 712 aa21.55■■□□□ 1.04
ITGB4-201ENST00000200181 MFAP1P55081 439 aaKnown RBP21.54■■□□□ 1.04
ITGB4-201ENST00000200181 CALD1Q05682 793 aaKnown RBP21.54■■□□□ 1.04
ITGB4-201ENST00000200181 HSP90AA2PQ14568 343 aaPredicted RBP21.53■■□□□ 1.04
ITGB4-201ENST00000200181 RCAN3Q9UKA8 241 aa21.53■■□□□ 1.04
ITGB4-201ENST00000200181 KTN1Q86UP2 1357 aaKnown RBP21.52■■□□□ 1.04
ITGB4-201ENST00000200181 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
ITGB4-201ENST00000200181 TPM3P06753 285 aa21.49■■□□□ 1.03
ITGB4-201ENST00000200181 SETQ01105 290 aaPredicted RBP21.49■■□□□ 1.03
ITGB4-201ENST00000200181 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
ITGB4-201ENST00000200181 CREBRFQ8IUR6 639 aa21.47■■□□□ 1.03
ITGB4-201ENST00000200181 RASSF8Q8NHQ8 419 aa21.47■■□□□ 1.03
ITGB4-201ENST00000200181 PHF14O94880 888 aa21.47■■□□□ 1.03
ITGB4-201ENST00000200181 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
ITGB4-201ENST00000200181 KANK1Q14678 1352 aa21.46■■□□□ 1.03
ITGB4-201ENST00000200181 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
ITGB4-201ENST00000200181 HSPA5P11021 654 aaKnown RBP21.45■■□□□ 1.02
ITGB4-201ENST00000200181 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
ITGB4-201ENST00000200181 TRIM6-TRIM34B2RNG4 842 aa21.45■■□□□ 1.02
ITGB4-201ENST00000200181 SAFB2Q14151 953 aaKnown RBP eCLIP21.44■■□□□ 1.02
ITGB4-201ENST00000200181 FOXD4L1Q9NU39 408 aa21.44■■□□□ 1.02
ITGB4-201ENST00000200181 CEP89Q96ST8 783 aa21.44■■□□□ 1.02
ITGB4-201ENST00000200181 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
ITGB4-201ENST00000200181 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
ITGB4-201ENST00000200181 HDGFP51858 240 aaKnown RBP21.43■■□□□ 1.02
ITGB4-201ENST00000200181 NOL8Q76FK4 1167 aaKnown RBP21.42■■□□□ 1.02
ITGB4-201ENST00000200181 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
ITGB4-201ENST00000200181 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.02
ITGB4-201ENST00000200181 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
ITGB4-201ENST00000200181 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
ITGB4-201ENST00000200181 ZNF330Q9Y3S2 320 aaPredicted RBP21.41■■□□□ 1.02
ITGB4-201ENST00000200181 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
ITGB4-201ENST00000200181 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
ITGB4-201ENST00000200181 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
ITGB4-201ENST00000200181 HMMRO75330 724 aa21.38■■□□□ 1.01
ITGB4-201ENST00000200181 STK31Q9BXU1 1019 aa21.37■■□□□ 1.01
ITGB4-201ENST00000200181 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
ITGB4-201ENST00000200181 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
ITGB4-201ENST00000200181 DDX11L8A8MPP1 907 aa21.36■■□□□ 1.01
ITGB4-201ENST00000200181 RALBP1Q15311 655 aa21.36■■□□□ 1.01
ITGB4-201ENST00000200181 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
ITGB4-201ENST00000200181 ST18O60284 1047 aa21.36■■□□□ 1.01
ITGB4-201ENST00000200181 KIF16BQ96L93 1317 aa21.35■■□□□ 1.01
ITGB4-201ENST00000200181 TAF7LQ5H9L4 462 aa21.34■■□□□ 1.01
ITGB4-201ENST00000200181 CHMP4AQ9BY43 222 aa21.34■■□□□ 1.01
ITGB4-201ENST00000200181 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
ITGB4-201ENST00000200181 SF3A1Q15459 793 aaKnown RBP21.34■■□□□ 1.01
ITGB4-201ENST00000200181 FOXD4L5Q5VV16 416 aaPredicted RBP21.33■■□□□ 1
ITGB4-201ENST00000200181 FOXD4L4Q8WXT5 416 aaPredicted RBP21.33■■□□□ 1
ITGB4-201ENST00000200181 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1
ITGB4-201ENST00000200181 SPAG9O60271 1321 aaKnown RBP21.33■■□□□ 1
ITGB4-201ENST00000200181 TMX4Q9H1E5 349 aaPredicted RBP21.33■■□□□ 1
ITGB4-201ENST00000200181 STK26Q9P289 416 aa21.32■■□□□ 1
ITGB4-201ENST00000200181 KIF3AQ9Y496 699 aa21.32■■□□□ 1
ITGB4-201ENST00000200181 CCAR2Q8N163 923 aaKnown RBP21.31■■□□□ 1
ITGB4-201ENST00000200181 PES1O00541 588 aaKnown RBP21.31■■□□□ 1
ITGB4-201ENST00000200181 CSB-PGBD3P0DP91 1061 aa21.31■■□□□ 1
ITGB4-201ENST00000200181 TPD52L1Q16890 204 aaPredicted RBP21.3■■□□□ 1
ITGB4-201ENST00000200181 ZNF771Q7L3S4 317 aaPredicted RBP21.3■■□□□ 1
ITGB4-201ENST00000200181 GPS2Q13227 327 aa21.3■■□□□ 1
ITGB4-201ENST00000200181 TSR1Q2NL82 804 aaKnown RBP21.29■■□□□ 1
ITGB4-201ENST00000200181 PATL2C9JE40 543 aaKnown RBP21.29■■□□□ 1
ITGB4-201ENST00000200181 PAK3O75914 559 aaPredicted RBP21.29■■□□□ 1
ITGB4-201ENST00000200181 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
ITGB4-201ENST00000200181 MARCH6O60337 910 aa21.28■■□□□ 1
ITGB4-201ENST00000200181 TOMM22Q9NS69 142 aa21.27■■□□□ 1
ITGB4-201ENST00000200181 GOLGA6L19H0YKK7 550 aa21.27■■□□□ 1
ITGB4-201ENST00000200181 SLC4A10Q6U841 1118 aa21.27■■□□□ 1
ITGB4-201ENST00000200181 CCDC70Q6NSX1 233 aa21.27■□□□□ 0.99
ITGB4-201ENST00000200181 ROCK2O75116 1388 aaKnown RBP21.26■□□□□ 0.99
ITGB4-201ENST00000200181 CLUAP1Q96AJ1 413 aa21.26■□□□□ 0.99
ITGB4-201ENST00000200181 H3BQV1 296 aa21.25■□□□□ 0.99
ITGB4-201ENST00000200181 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
ITGB4-201ENST00000200181 MLECQ14165 292 aa21.25■□□□□ 0.99
ITGB4-201ENST00000200181 VPS53Q5VIR6 699 aa21.25■□□□□ 0.99
ITGB4-201ENST00000200181 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
ITGB4-201ENST00000200181 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
ITGB4-201ENST00000200181 CALRP27797 417 aaKnown RBP21.24■□□□□ 0.99
ITGB4-201ENST00000200181 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms