RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 NAIPQ13075 1403 aa23.19■■□□□ 1.3
LAPTM4A-201ENST00000175091 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
LAPTM4A-201ENST00000175091 CDC42BPBQ9Y5S2 1711 aa23.17■■□□□ 1.3
LAPTM4A-201ENST00000175091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.34e-17■□□□□ 10.3
LAPTM4A-201ENST00000175091 MAPKBP1O60336 1514 aa23.15■■□□□ 1.3
LAPTM4A-201ENST00000175091 ADGBQ8N7X0 1667 aa23.14■■□□□ 1.3
LAPTM4A-201ENST00000175091 ABCC5O15440 1437 aa23.14■■□□□ 1.3
LAPTM4A-201ENST00000175091 MYO5CQ9NQX4 1742 aa23.14■■□□□ 1.29
LAPTM4A-201ENST00000175091 CFDP1Q9UEE9 299 aaPredicted RBP23.14■■□□□ 1.29
LAPTM4A-201ENST00000175091 ZNF644Q9H582 1327 aaPredicted RBP23.13■■□□□ 1.29
LAPTM4A-201ENST00000175091 ROCK1Q13464 1354 aa23.1■■□□□ 1.29
LAPTM4A-201ENST00000175091 SAMD9LQ8IVG5 1584 aa23.09■■□□□ 1.29
LAPTM4A-201ENST00000175091 ARHGEF5Q12774 1597 aa23.07■■□□□ 1.28
LAPTM4A-201ENST00000175091 KDM6BO15054 1643 aa23.06■■□□□ 1.28
LAPTM4A-201ENST00000175091 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
LAPTM4A-201ENST00000175091 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
LAPTM4A-201ENST00000175091 WDR7Q9Y4E6 1490 aa23.03■■□□□ 1.28
LAPTM4A-201ENST00000175091 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
LAPTM4A-201ENST00000175091 ARHGAP5Q13017 1502 aa23.02■■□□□ 1.28
LAPTM4A-201ENST00000175091 ZNF777Q9ULD5 760 aaPredicted RBP23■■□□□ 1.27
LAPTM4A-201ENST00000175091 RRP7BPQ9NSQ0 103 aa22.99■■□□□ 1.27
LAPTM4A-201ENST00000175091 MBD5Q9P267 1494 aa22.99■■□□□ 1.27
LAPTM4A-201ENST00000175091 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
LAPTM4A-201ENST00000175091 ABCA9Q8IUA7 1624 aa22.97■■□□□ 1.27
LAPTM4A-201ENST00000175091 SYCP2Q9BX26 1530 aa22.97■■□□□ 1.27
LAPTM4A-201ENST00000175091 NCOA1Q15788 1441 aa22.96■■□□□ 1.27
LAPTM4A-201ENST00000175091 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
LAPTM4A-201ENST00000175091 PLCH2O75038 1416 aa22.95■■□□□ 1.26
LAPTM4A-201ENST00000175091 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
LAPTM4A-201ENST00000175091 PLEKHH2Q8IVE3 1493 aa22.93■■□□□ 1.26
LAPTM4A-201ENST00000175091 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
LAPTM4A-201ENST00000175091 ASXL2Q76L83 1435 aa22.92■■□□□ 1.26
LAPTM4A-201ENST00000175091 ABCC1P33527 1531 aa22.91■■□□□ 1.26
LAPTM4A-201ENST00000175091 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
LAPTM4A-201ENST00000175091 KIAA1107Q9UPP5 1409 aa22.9■■□□□ 1.26
LAPTM4A-201ENST00000175091 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
LAPTM4A-201ENST00000175091 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
LAPTM4A-201ENST00000175091 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
LAPTM4A-201ENST00000175091 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
LAPTM4A-201ENST00000175091 DENND4BO75064 1496 aaPredicted RBP22.87■■□□□ 1.25
LAPTM4A-201ENST00000175091 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
LAPTM4A-201ENST00000175091 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
LAPTM4A-201ENST00000175091 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
LAPTM4A-201ENST00000175091 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.25
LAPTM4A-201ENST00000175091 RSPH4AQ5TD94 716 aa22.83■■□□□ 1.24
LAPTM4A-201ENST00000175091 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
LAPTM4A-201ENST00000175091 TSPY4P0CV99 314 aa22.8■■□□□ 1.24
LAPTM4A-201ENST00000175091 TSPY10P0CW01 314 aa22.8■■□□□ 1.24
LAPTM4A-201ENST00000175091 EFCAB2Q5VUJ9 269 aa22.79■■□□□ 1.24
LAPTM4A-201ENST00000175091 KIF15Q9NS87 1388 aa22.78■■□□□ 1.24
LAPTM4A-201ENST00000175091 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
LAPTM4A-201ENST00000175091 FANCAO15360 1455 aa22.77■■□□□ 1.24
LAPTM4A-201ENST00000175091 PZPP20742 1482 aa22.76■■□□□ 1.23
LAPTM4A-201ENST00000175091 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
LAPTM4A-201ENST00000175091 TRIM52Q96A61 297 aa22.75■■□□□ 1.23
LAPTM4A-201ENST00000175091 SIN3AQ96ST3 1273 aa22.74■■□□□ 1.23
LAPTM4A-201ENST00000175091 CFAP74Q9C0B2 1584 aa22.73■■□□□ 1.23
LAPTM4A-201ENST00000175091 TIMELESSQ9UNS1 1208 aa22.72■■□□□ 1.23
LAPTM4A-201ENST00000175091 ZFYVE16Q7Z3T8 1539 aa22.71■■□□□ 1.23
LAPTM4A-201ENST00000175091 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
LAPTM4A-201ENST00000175091 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
LAPTM4A-201ENST00000175091 UNC13BO14795 1591 aa22.7■■□□□ 1.22
LAPTM4A-201ENST00000175091 INO80Q9ULG1 1556 aaPredicted RBP22.7■■□□□ 1.22
LAPTM4A-201ENST00000175091 DUOX2Q9NRD8 1548 aa22.68■■□□□ 1.22
LAPTM4A-201ENST00000175091 ADGRL1O94910 1474 aa22.68■■□□□ 1.22
LAPTM4A-201ENST00000175091 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
LAPTM4A-201ENST00000175091 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
LAPTM4A-201ENST00000175091 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
LAPTM4A-201ENST00000175091 CD109Q6YHK3 1445 aa22.64■■□□□ 1.21
LAPTM4A-201ENST00000175091 ERBINQ96RT1 1412 aa22.64■■□□□ 1.21
LAPTM4A-201ENST00000175091 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
LAPTM4A-201ENST00000175091 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
LAPTM4A-201ENST00000175091 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
LAPTM4A-201ENST00000175091 TONSLQ96HA7 1378 aa22.62■■□□□ 1.21
LAPTM4A-201ENST00000175091 ANKRD30BQ9BXX2 1392 aa22.62■■□□□ 1.21
LAPTM4A-201ENST00000175091 SLC4A1APQ9BWU0 796 aaKnown RBP22.62■■□□□ 1.21
LAPTM4A-201ENST00000175091 GLI2P10070 1586 aa22.61■■□□□ 1.21
LAPTM4A-201ENST00000175091 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
LAPTM4A-201ENST00000175091 SCAPERQ9BY12 1400 aa22.6■■□□□ 1.21
LAPTM4A-201ENST00000175091 IQGAP3Q86VI3 1631 aa22.59■■□□□ 1.21
LAPTM4A-201ENST00000175091 RPRD2Q5VT52 1461 aaKnown RBP22.59■■□□□ 1.21
LAPTM4A-201ENST00000175091 FAM135AQ9P2D6 1515 aa22.58■■□□□ 1.21
LAPTM4A-201ENST00000175091 NUP155O75694 1391 aa22.58■■□□□ 1.21
LAPTM4A-201ENST00000175091 KDM5CP41229 1560 aa22.57■■□□□ 1.2
LAPTM4A-201ENST00000175091 DIP2BQ9P265 1576 aa22.57■■□□□ 1.2
LAPTM4A-201ENST00000175091 ZNF518AQ6AHZ1 1483 aa22.56■■□□□ 1.2
LAPTM4A-201ENST00000175091 SPAG9O60271 1321 aaKnown RBP22.56■■□□□ 1.2
LAPTM4A-201ENST00000175091 FOXD1Q16676 465 aa22.55■■□□□ 1.2
LAPTM4A-201ENST00000175091 KIDINS220Q9ULH0 1771 aa22.55■■□□□ 1.2
LAPTM4A-201ENST00000175091 NEO1Q92859 1461 aa22.55■■□□□ 1.2
LAPTM4A-201ENST00000175091 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
LAPTM4A-201ENST00000175091 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
LAPTM4A-201ENST00000175091 POGZQ7Z3K3 1410 aa22.53■■□□□ 1.2
LAPTM4A-201ENST00000175091 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
LAPTM4A-201ENST00000175091 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
LAPTM4A-201ENST00000175091 TEX14Q8IWB6 1497 aa22.52■■□□□ 1.2
LAPTM4A-201ENST00000175091 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
LAPTM4A-201ENST00000175091 PKD2Q13563 968 aa22.49■■□□□ 1.19
LAPTM4A-201ENST00000175091 RICTORQ6R327 1708 aa22.46■■□□□ 1.19
LAPTM4A-201ENST00000175091 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms