RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 KDM6BO15054 1643 aa14.38□□□□□ -0.11
CX3CL1-201ENST00000006053 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
CX3CL1-201ENST00000006053 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
CX3CL1-201ENST00000006053 NCOA1Q15788 1441 aa14.35□□□□□ -0.11
CX3CL1-201ENST00000006053 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
CX3CL1-201ENST00000006053 THOC2Q8NI27 1593 aaKnown RBP14.35□□□□□ -0.11
CX3CL1-201ENST00000006053 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
CX3CL1-201ENST00000006053 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
CX3CL1-201ENST00000006053 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
CX3CL1-201ENST00000006053 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
CX3CL1-201ENST00000006053 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
CX3CL1-201ENST00000006053 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
CX3CL1-201ENST00000006053 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
CX3CL1-201ENST00000006053 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
CX3CL1-201ENST00000006053 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
CX3CL1-201ENST00000006053 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
CX3CL1-201ENST00000006053 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
CX3CL1-201ENST00000006053 GCC2Q8IWJ2 1684 aa14.31□□□□□ -0.12
CX3CL1-201ENST00000006053 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
CX3CL1-201ENST00000006053 EPRSP07814 1512 aaKnown RBP14.31□□□□□ -0.12
CX3CL1-201ENST00000006053 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
CX3CL1-201ENST00000006053 ZNF644Q9H582 1327 aaPredicted RBP14.3□□□□□ -0.12
CX3CL1-201ENST00000006053 AKNAQ7Z591 1439 aa14.3□□□□□ -0.12
CX3CL1-201ENST00000006053 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
CX3CL1-201ENST00000006053 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
CX3CL1-201ENST00000006053 RPRD2Q5VT52 1461 aaKnown RBP14.27□□□□□ -0.13
CX3CL1-201ENST00000006053 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
CX3CL1-201ENST00000006053 DAPK1P53355 1430 aa14.25□□□□□ -0.13
CX3CL1-201ENST00000006053 DAXXQ9UER7 740 aaPredicted RBP14.25□□□□□ -0.13
CX3CL1-201ENST00000006053 TEX14Q8IWB6 1497 aa14.24□□□□□ -0.13
CX3CL1-201ENST00000006053 NBR1Q14596 966 aa14.23□□□□□ -0.13
CX3CL1-201ENST00000006053 SPATA31E1Q6ZUB1 1445 aa14.23□□□□□ -0.13
CX3CL1-201ENST00000006053 ABCC5O15440 1437 aa14.22□□□□□ -0.13
CX3CL1-201ENST00000006053 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
CX3CL1-201ENST00000006053 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
CX3CL1-201ENST00000006053 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
CX3CL1-201ENST00000006053 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
CX3CL1-201ENST00000006053 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
CX3CL1-201ENST00000006053 UBE2Q2Q8WVN8 375 aa14.21□□□□□ -0.13
CX3CL1-201ENST00000006053 IQGAP2Q13576 1575 aa14.21□□□□□ -0.13
CX3CL1-201ENST00000006053 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.14
CX3CL1-201ENST00000006053 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
CX3CL1-201ENST00000006053 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
CX3CL1-201ENST00000006053 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
CX3CL1-201ENST00000006053 USP47Q96K76 1375 aa14.19□□□□□ -0.14
CX3CL1-201ENST00000006053 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
CX3CL1-201ENST00000006053 WDR62O43379 1518 aa14.19□□□□□ -0.14
CX3CL1-201ENST00000006053 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-201ENST00000006053 PKD2Q13563 968 aa14.17□□□□□ -0.14
CX3CL1-201ENST00000006053 CFDP1Q9UEE9 299 aaPredicted RBP14.17□□□□□ -0.14
CX3CL1-201ENST00000006053 MYT1LQ9UL68 1186 aa14.17□□□□□ -0.14
CX3CL1-201ENST00000006053 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
CX3CL1-201ENST00000006053 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
CX3CL1-201ENST00000006053 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
CX3CL1-201ENST00000006053 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
CX3CL1-201ENST00000006053 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
CX3CL1-201ENST00000006053 PZPP20742 1482 aa14.13□□□□□ -0.15
CX3CL1-201ENST00000006053 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
CX3CL1-201ENST00000006053 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
CX3CL1-201ENST00000006053 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
CX3CL1-201ENST00000006053 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
CX3CL1-201ENST00000006053 KIAA1107Q9UPP5 1409 aa14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 BCORL1Q5H9F3 1711 aa14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 NUP153P49790 1475 aaKnown RBP14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
CX3CL1-201ENST00000006053 NPM2Q86SE8 214 aaKnown RBP14.09□□□□□ -0.15
CX3CL1-201ENST00000006053 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
CX3CL1-201ENST00000006053 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
CX3CL1-201ENST00000006053 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
CX3CL1-201ENST00000006053 CAMSAP2Q08AD1 1489 aa14.08□□□□□ -0.16
CX3CL1-201ENST00000006053 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
CX3CL1-201ENST00000006053 MBD5Q9P267 1494 aa14.06□□□□□ -0.16
CX3CL1-201ENST00000006053 ARID4BQ4LE39 1312 aaPredicted RBP14.06□□□□□ -0.16
CX3CL1-201ENST00000006053 NUP155O75694 1391 aa14.06□□□□□ -0.16
CX3CL1-201ENST00000006053 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
CX3CL1-201ENST00000006053 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
CX3CL1-201ENST00000006053 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
CX3CL1-201ENST00000006053 ANKRD30AQ9BXX3 1397 aa14.05□□□□□ -0.16
CX3CL1-201ENST00000006053 DISP1Q96F81 1524 aa14.05□□□□□ -0.16
CX3CL1-201ENST00000006053 DCAF11Q8TEB1 546 aa14.05□□□□□ -0.16
CX3CL1-201ENST00000006053 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
CX3CL1-201ENST00000006053 RRP1P56182 461 aaKnown RBP14.04□□□□□ -0.16
CX3CL1-201ENST00000006053 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
CX3CL1-201ENST00000006053 ANKRD50Q9ULJ7 1429 aa14.04□□□□□ -0.16
CX3CL1-201ENST00000006053 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
CX3CL1-201ENST00000006053 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
CX3CL1-201ENST00000006053 KIAA0586Q9BVV6 1533 aa14.03□□□□□ -0.16
CX3CL1-201ENST00000006053 KDM5CP41229 1560 aa14.03□□□□□ -0.16
CX3CL1-201ENST00000006053 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
CX3CL1-201ENST00000006053 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
CX3CL1-201ENST00000006053 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.17
CX3CL1-201ENST00000006053 RALBP1Q15311 655 aa14.02□□□□□ -0.17
CX3CL1-201ENST00000006053 KIF14Q15058 1648 aa14.01□□□□□ -0.17
CX3CL1-201ENST00000006053 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
CX3CL1-201ENST00000006053 PLB1Q6P1J6 1458 aa14□□□□□ -0.17
CX3CL1-201ENST00000006053 IL27Q8NEV9 243 aa14□□□□□ -0.17
CX3CL1-201ENST00000006053 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms