RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Eea1Q8BL66 1411 aa34.73■■■■□ 3.15
Pcf11-204ENSMUST00000208058 Fam208aQ69ZR9 1610 aaKnown RBP34.73■■■■□ 3.15
Pcf11-204ENSMUST00000208058 Abca9Q8K449 1623 aa34.73■■■■□ 3.15
Pcf11-204ENSMUST00000208058 Fam163aQ8CAA5 168 aa34.71■■■■□ 3.15
Pcf11-204ENSMUST00000208058 Mug1P28665 1476 aa34.68■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Cdc42bpaQ3UU96 1719 aa34.67■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Kiaa1551Q5DTW7 1521 aa34.67■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Hecw2Q6I6G8 1578 aa34.66■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Kdm6bQ5NCY0 1641 aa34.65■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Dhx57Q6P5D3 1388 aaKnown RBP34.64■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Kiaa0556Q8C753 1610 aa34.64■■■■□ 3.14
Pcf11-204ENSMUST00000208058 Ap3b1Q9Z1T1 1105 aa34.6■■■■□ 3.13
Pcf11-204ENSMUST00000208058 Synj2Q9D2G5 1434 aa34.57■■■■□ 3.13
Pcf11-204ENSMUST00000208058 Naip2Q9QUK4 1447 aa34.55■■■■□ 3.12
Pcf11-204ENSMUST00000208058 MlecQ6ZQI3 291 aaKnown RBP34.53■■■■□ 3.12
Pcf11-204ENSMUST00000208058 Kif14L0N7N1 1674 aaKnown RBP34.5■■■■□ 3.11
Pcf11-204ENSMUST00000208058 Qser1A2BIE1 1698 aa34.48■■■■□ 3.11
Pcf11-204ENSMUST00000208058 CntlnA2AM05 1397 aa34.47■■■■□ 3.11
Pcf11-204ENSMUST00000208058 Brwd3A2AHJ4 1799 aa34.44■■■■□ 3.1
Pcf11-204ENSMUST00000208058 Arhgap5P97393 1501 aa34.41■■■■□ 3.1
Pcf11-204ENSMUST00000208058 Gm1043A0A140LJC2 1431 aa34.41■■■■□ 3.1
Pcf11-204ENSMUST00000208058 Ncapd3Q6ZQK0 1506 aa34.4■■■■□ 3.1
Pcf11-204ENSMUST00000208058 Peg3Q3URU2 1571 aa34.4■■■■□ 3.1
Pcf11-204ENSMUST00000208058 Cul9Q80TT8 1865 aa34.36■■■■□ 3.09
Pcf11-204ENSMUST00000208058 Kidins220E9Q9B7 1793 aa34.36■■■■□ 3.09
Pcf11-204ENSMUST00000208058 NexmifQ5DTT1 1515 aa34.35■■■■□ 3.09
Pcf11-204ENSMUST00000208058 OvosQ3UU35 1456 aa34.33■■■■□ 3.09
Pcf11-204ENSMUST00000208058 Adamtsl3G3UXC7 1706 aa34.33■■■■□ 3.09
Pcf11-204ENSMUST00000208058 Kdm5cP41230 1554 aa34.28■■■■□ 3.08
Pcf11-204ENSMUST00000208058 Tiam1Q60610 1591 aa34.27■■■■□ 3.08
Pcf11-204ENSMUST00000208058 Dip2cE9PWR4 1557 aa34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Gm32742A0A1B0GT42 1604 aa34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Yeats2Q3TUF7 1407 aa34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Pdcd11Q6NS46 1862 aaKnown RBP34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Lmod2Q3UHZ5 550 aa34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Lemd3Q9WU40 921 aa34.23■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Ptch1Q61115 1434 aa34.21■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Naip1Q9QWK5 1403 aa34.21■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Zmym4A2A791 1549 aaKnown RBP34.2■■■■□ 3.07
Pcf11-204ENSMUST00000208058 Abcc3B2RX12 1523 aa34.2■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Atp10aO54827 1508 aa34.2■■■■□ 3.06
Pcf11-204ENSMUST00000208058 RereQ80TZ9 1558 aa34.19■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Cyb5rlB1AS42 316 aa34.17■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Cfap74Q3UY96 1578 aa34.17■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Neurl4Q5NCX5 1563 aa34.17■■■■□ 3.06
Pcf11-204ENSMUST00000208058 NpatQ8BMA5 1420 aa34.17■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Trappc8E9PWG2 1437 aa34.16■■■■□ 3.06
Pcf11-204ENSMUST00000208058 Camsap2Q8C1B1 1461 aa34.11■■■■□ 3.05
Pcf11-204ENSMUST00000208058 Adcy10Q8C0T9 1614 aa34.11■■■■□ 3.05
Pcf11-204ENSMUST00000208058 Ercc6l2Q9JIM3 1537 aa34.08■■■■□ 3.05
Pcf11-204ENSMUST00000208058 Tdrd9Q14BI7 1383 aa34.08■■■■□ 3.05
Pcf11-204ENSMUST00000208058 Caskin1Q6P9K8 1431 aa34.06■■■■□ 3.04
Pcf11-204ENSMUST00000208058 PtprmP28828 1452 aa34.05■■■■□ 3.04
Pcf11-204ENSMUST00000208058 Lmtk2Q3TYD6 1471 aa34.02■■■■□ 3.04
Pcf11-204ENSMUST00000208058 Hecw1Q8K4P8 1604 aa33.96■■■■□ 3.03
Pcf11-204ENSMUST00000208058 Arhgef40Q3UPH7 1517 aa33.95■■■■□ 3.03
Pcf11-204ENSMUST00000208058 Cdc42bpbQ7TT50 1713 aa33.95■■■■□ 3.03
Pcf11-204ENSMUST00000208058 Supt6hQ62383 1726 aaKnown RBP33.92■■■■□ 3.02
Pcf11-204ENSMUST00000208058 Cfap65Q3V0B4 1847 aa33.92■■■■□ 3.02
Pcf11-204ENSMUST00000208058 Ccnb3Q810T2 1396 aa33.9■■■■□ 3.02
Pcf11-204ENSMUST00000208058 Sart1Q9Z315 806 aaKnown RBP33.87■■■■□ 3.01
Pcf11-204ENSMUST00000208058 Trpm1Q2TV84 1622 aa33.85■■■■□ 3.01
Pcf11-204ENSMUST00000208058 Safb2Q80YR5 991 aaKnown RBP33.84■■■■□ 3.01
Pcf11-204ENSMUST00000208058 Cdc42bpgQ80UW5 1551 aa33.84■■■■□ 3.01
Pcf11-204ENSMUST00000208058 MyclP10166 368 aa33.82■■■■□ 3
Pcf11-204ENSMUST00000208058 Talpid3E9PV87 1520 aa33.82■■■■□ 3
Pcf11-204ENSMUST00000208058 Ahdc1Q6PAL7 1594 aaKnown RBP33.79■■■■□ 3
Pcf11-204ENSMUST00000208058 SphkapQ6NSW3 1687 aa33.77■■■■□ 3
Pcf11-204ENSMUST00000208058 Dennd4bQ3U1Y4 1499 aa33.77■■■■□ 3
Pcf11-204ENSMUST00000208058 Abca6Q8K441 1624 aa33.75■■■□□ 2.99
Pcf11-204ENSMUST00000208058 Fhod3Q76LL6 1578 aa33.75■■■□□ 2.99
Pcf11-204ENSMUST00000208058 Myom2Q14BI5 1463 aa33.73■■■□□ 2.99
Pcf11-204ENSMUST00000208058 Cdk11bP24788 784 aaKnown RBP33.71■■■□□ 2.99
Pcf11-204ENSMUST00000208058 Nos1Q9Z0J4 1429 aa33.7■■■□□ 2.99
Pcf11-204ENSMUST00000208058 Map3k5O35099 1380 aa33.68■■■□□ 2.98
Pcf11-204ENSMUST00000208058 Xrn1P97789 1719 aaKnown RBP33.63■■■□□ 2.97
Pcf11-204ENSMUST00000208058 Gli2Q0VGT2 1544 aa33.63■■■□□ 2.97
Pcf11-204ENSMUST00000208058 Naip6Q9JIB6 1403 aa33.59■■■□□ 2.97
Pcf11-204ENSMUST00000208058 Dip2bQ3UH60 1574 aa33.59■■■□□ 2.97
Pcf11-204ENSMUST00000208058 4930407I10RikD3Z5T8 1512 aa33.58■■■□□ 2.97
Pcf11-204ENSMUST00000208058 Afap1Q80YS6 731 aa33.58■■■□□ 2.97
Pcf11-204ENSMUST00000208058 Mast1Q9R1L5 1570 aa33.57■■■□□ 2.96
Pcf11-204ENSMUST00000208058 Fmn2Q9JL04 1578 aa33.56■■■□□ 2.96
Pcf11-204ENSMUST00000208058 Trpm2Q91YD4 1506 aa33.53■■■□□ 2.96
Pcf11-204ENSMUST00000208058 Znf518aB2RRF6 1478 aaKnown RBP33.51■■■□□ 2.96
Pcf11-204ENSMUST00000208058 Topaz1E5FYH1 1653 aa33.49■■■□□ 2.95
Pcf11-204ENSMUST00000208058 RictorQ6QI06 1708 aa33.49■■■□□ 2.95
Pcf11-204ENSMUST00000208058 CltcQ68FD5 1675 aaKnown RBP33.48■■■□□ 2.95
Pcf11-204ENSMUST00000208058 Scn4aQ9ER60 1841 aa33.46■■■□□ 2.95
Pcf11-204ENSMUST00000208058 Uggt2E9Q4X2 1504 aa33.46■■■□□ 2.95
Pcf11-204ENSMUST00000208058 Abcc5Q9R1X5 1436 aa33.45■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Prdm16A2A935 1275 aa33.43■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Knl1Q66JQ7 1612 aa33.42■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Mtus2Q3UHD3 1353 aa33.41■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Plch2A2AP18 1501 aa33.4■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Topbp1Q6ZQF0 1515 aa33.4■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Abca17E9PX95 1733 aa33.39■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Dip2aQ8BWT5 1523 aa33.39■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Plekhh2Q8C115 1491 aa33.39■■■□□ 2.94
Pcf11-204ENSMUST00000208058 Rrp7aQ9D1C9 280 aaKnown RBP33.39■■■□□ 2.94
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms