RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Arhgef40Q3UPH7 1517 aa19.14■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Fgd6Q69ZL1 1399 aa19.14■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Adcy10Q8C0T9 1614 aa19.13■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Chic2Q9D9G3 165 aa19.12■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Mtus2Q3UHD3 1353 aa19.12■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Caskin1Q6P9K8 1431 aa19.11■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Arhgef12Q8R4H2 1543 aaKnown RBP19.1■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Jph4Q80WT0 628 aa19.1■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Mroh2aD3Z750 1679 aa19.1■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Cabp1Q9JLK7 227 aa19.09■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Kdm3bQ6ZPY7 1562 aa19.08■□□□□ 0.65
Pdlim5-208ENSMUST00000196220 Zcchc11B2RX14 1644 aaKnown RBP19.08■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Neo1P97798 1493 aa19.08■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Hspa5P20029 655 aaKnown RBP19.07■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Naip5Q9R016 1403 aa19.07■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Mphosph9A6H5Y1 991 aa19.06■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Neurod1Q60867 357 aa19.06■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Lamc1P02468 1607 aaKnown RBP19.06■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Gm13697A2AK42 830 aa19.05■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Kdm6bQ5NCY0 1641 aa19.05■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Fancd2Q80V62 1450 aa19.04■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Ube2uB1AUC4 352 aa19.03■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Nop58Q6DFW4 536 aaKnown RBP19.03■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 Prex2Q3LAC4 1598 aa19.03■□□□□ 0.64
Pdlim5-208ENSMUST00000196220 SphkapQ6NSW3 1687 aa18.99■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Fam208aQ69ZR9 1610 aaKnown RBP18.99■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Wdr7Q920I9 1489 aa18.98■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Kiaa1210E9Q0C6 1637 aa18.97■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Gm14025A2AP89 1413 aa18.97■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Kif21bQ9QXL1 1668 aa18.96■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 AknaQ80VW7 1404 aa18.96■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Anks4bQ8K3X6 423 aa18.96■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 Rprd2Q6NXI6 1469 aaKnown RBP18.96■□□□□ 0.63
Pdlim5-208ENSMUST00000196220 AlkP97793 1621 aa18.94■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 DroshaQ5HZJ0 1373 aaKnown RBP18.92■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Pik3c2gO70167 1506 aa18.92■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Neurl4Q5NCX5 1563 aa18.92■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Adgrb2Q8CGM1 1561 aa18.91■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Tdrd9Q14BI7 1383 aa18.91■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Fmn2Q9JL04 1578 aa18.91■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Adgrl2Q8JZZ7 1487 aa18.9■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Trpm2Q91YD4 1506 aa18.9■□□□□ 0.62
Pdlim5-208ENSMUST00000196220 Pkd2O35245 966 aa18.89■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Rnf17Q99MV7 1640 aa18.89■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Ppargc1bQ8VHJ7 1014 aa18.88■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Cfap74Q3UY96 1578 aa18.87■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Pprc1Q6NZN1 1644 aa18.87■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Usp47Q8BY87 1376 aa18.86■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Abcc1O35379 1528 aa18.86■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Mast1Q9R1L5 1570 aa18.86■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 NhsB1AV60 1647 aa18.85■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Zfp644E9QA22 1323 aa18.83■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Pdcd11Q6NS46 1862 aaKnown RBP18.83■□□□□ 0.61
Pdlim5-208ENSMUST00000196220 Gm32742A0A1B0GT42 1604 aa18.83■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Arhgap5P97393 1501 aa18.79■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Chd1P40201 1711 aa18.79■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Nup155Q99P88 1391 aaKnown RBP18.79■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Hecw1Q8K4P8 1604 aa18.78■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Lrrc9Q8CDN9 1456 aa18.77■□□□□ 0.6
Pdlim5-208ENSMUST00000196220 Clstn2Q9ER65 966 aa18.77■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Igf1rQ60751 1373 aa18.77■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Abca8bQ8K440 1620 aa18.76■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Ttll5Q8CHB8 1328 aa18.76■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Fkbp15Q6P9Q6 1216 aaKnown RBP18.75■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Abcc3B2RX12 1523 aa18.75■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 PtprgQ05909 1442 aa18.73■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Mbd5B1AYB6 1498 aa18.71■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Supt6hQ62383 1726 aaKnown RBP18.71■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Stra8P70278 393 aa18.71■□□□□ 0.59
Pdlim5-208ENSMUST00000196220 Atp10dQ8K2X1 1416 aa18.7■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Prdm16A2A935 1275 aa18.7■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Ncoa1P70365 1447 aa18.7■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Trappc8E9PWG2 1437 aa18.69■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Map4P27546 1125 aaKnown RBP18.69■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Dhx9O70133 1380 aaKnown RBP18.68■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Ssh2Q5SW75 1423 aa18.68■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Trak1Q6PD31 939 aa18.67■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Rock1P70335 1354 aa18.66■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Sart1Q9Z315 806 aaKnown RBP18.66■□□□□ 0.58
Pdlim5-208ENSMUST00000196220 Kif14L0N7N1 1674 aaKnown RBP18.64■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Smg6P61406 1418 aaKnown RBP18.64■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Cwc22Q8C5N3 908 aaKnown RBP18.63■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Cpsf1Q9EPU4 1441 aaKnown RBP18.62■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Sin3aQ60520 1274 aaKnown RBP18.61■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Rrp7aQ9D1C9 280 aaKnown RBP18.61■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Ppip5k1A2ARP1 1436 aa18.6■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Ythdc2B2RR83 1445 aaKnown RBP18.6■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Hdac5Q9Z2V6 1113 aa18.6■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Myom3A2ABU4 1439 aa18.59■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 AI481877A2ALV5 1481 aa18.59■□□□□ 0.57
Pdlim5-208ENSMUST00000196220 Dot1lQ6XZL8 1540 aa18.58■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Mug2P28666 1451 aa18.57■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Dapk1Q80YE7 1442 aa18.57■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Cdc42bpbQ7TT50 1713 aa18.57■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Tnnt3Q9QZ47 272 aa18.57■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Robo2Q7TPD3 1470 aa18.57■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Polr3aB2RXC6 1390 aa18.55■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Cd109Q8R422 1442 aa18.55■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Naip6Q9JIB6 1403 aa18.55■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Rgl3Q3UYI5 709 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms