RNA–Protein interactions for RNA: ENSMUST00000193792.5

Sec61a2-209, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 1 (best) BASIC

Gene Sec61a2, Length 2,110 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-209ENSMUST00000193792 A2mQ6GQT1 1474 aa23.08■■□□□ 1.29
Sec61a2-209ENSMUST00000193792 Fam208aQ69ZR9 1610 aaKnown RBP23.05■■□□□ 1.28
Sec61a2-209ENSMUST00000193792 Gm1043A0A140LJC2 1431 aa23.05■■□□□ 1.28
Sec61a2-209ENSMUST00000193792 Fndc1E9Q043 1732 aa23.03■■□□□ 1.28
Sec61a2-209ENSMUST00000193792 Naip1Q9QWK5 1403 aa23.03■■□□□ 1.28
Sec61a2-209ENSMUST00000193792 Cdc42bpaQ3UU96 1719 aa23.01■■□□□ 1.27
Sec61a2-209ENSMUST00000193792 Mlh3A0A1Y7VMP7 1443 aa23.01■■□□□ 1.27
Sec61a2-209ENSMUST00000193792 Tiam1Q60610 1591 aa23.01■■□□□ 1.27
Sec61a2-209ENSMUST00000193792 Rnf17Q99MV7 1640 aa22.95■■□□□ 1.27
Sec61a2-209ENSMUST00000193792 NexmifQ5DTT1 1515 aa22.94■■□□□ 1.26
Sec61a2-209ENSMUST00000193792 Lmod2Q3UHZ5 550 aa22.94■■□□□ 1.26
Sec61a2-209ENSMUST00000193792 Ncapd3Q6ZQK0 1506 aa22.91■■□□□ 1.26
Sec61a2-209ENSMUST00000193792 Arhgap5P97393 1501 aa22.89■■□□□ 1.26
Sec61a2-209ENSMUST00000193792 Abca9Q8K449 1623 aa22.88■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Synj2Q9D2G5 1434 aa22.87■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Lmtk2Q3TYD6 1471 aa22.86■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Kiaa0556Q8C753 1610 aa22.86■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Caskin1Q6P9K8 1431 aa22.85■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Cfap74Q3UY96 1578 aa22.83■■□□□ 1.25
Sec61a2-209ENSMUST00000193792 Plekhg3Q4VAC9 1341 aa22.81■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 Cdk11bP24788 784 aaKnown RBP22.8■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 Hecw2Q6I6G8 1578 aa22.79■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 Lemd3Q9WU40 921 aa22.79■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 Ccnb3Q810T2 1396 aa22.78■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 OvosQ3UU35 1456 aa22.77■■□□□ 1.24
Sec61a2-209ENSMUST00000193792 Alpk3Q924C5 1678 aa22.76■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Abcc3B2RX12 1523 aa22.74■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Tdrd9Q14BI7 1383 aa22.73■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Gm32742A0A1B0GT42 1604 aa22.73■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Adcy10Q8C0T9 1614 aa22.73■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Pdcd11Q6NS46 1862 aaKnown RBP22.72■■□□□ 1.23
Sec61a2-209ENSMUST00000193792 Kidins220E9Q9B7 1793 aa22.7■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Kdm5cP41230 1554 aa22.68■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Trappc8E9PWG2 1437 aa22.68■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Naip2Q9QUK4 1447 aa22.68■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Atp10aO54827 1508 aa22.65■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Plppr3Q7TPB0 716 aa22.64■■□□□ 1.22
Sec61a2-209ENSMUST00000193792 Arhgef40Q3UPH7 1517 aa22.63■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Dnajc5gQ8C632 165 aa22.63■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Kif14L0N7N1 1674 aaKnown RBP22.63■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Sart1Q9Z315 806 aaKnown RBP22.6■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Kdm6bQ5NCY0 1641 aa22.6■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Zmym4A2A791 1549 aaKnown RBP22.59■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Hecw1Q8K4P8 1604 aa22.59■■□□□ 1.21
Sec61a2-209ENSMUST00000193792 Dip2cE9PWR4 1557 aa22.57■■□□□ 1.2
Sec61a2-209ENSMUST00000193792 NpatQ8BMA5 1420 aa22.56■■□□□ 1.2
Sec61a2-209ENSMUST00000193792 Ptch1Q61115 1434 aa22.56■■□□□ 1.2
Sec61a2-209ENSMUST00000193792 RereQ80TZ9 1558 aa22.56■■□□□ 1.2
Sec61a2-209ENSMUST00000193792 Yeats2Q3TUF7 1407 aa22.52■■□□□ 1.2
Sec61a2-209ENSMUST00000193792 Neurl4Q5NCX5 1563 aa22.51■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 MlecQ6ZQI3 291 aaKnown RBP22.49■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Mtus2Q3UHD3 1353 aa22.49■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Qser1A2BIE1 1698 aa22.48■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Camsap2Q8C1B1 1461 aa22.48■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Plekhh2Q8C115 1491 aa22.48■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Prdm16A2A935 1275 aa22.48■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Cdc42bpbQ7TT50 1713 aa22.47■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Mast1Q9R1L5 1570 aa22.46■■□□□ 1.19
Sec61a2-209ENSMUST00000193792 Abcc5Q9R1X5 1436 aa22.45■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Cdc42bpgQ80UW5 1551 aa22.44■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Cul9Q80TT8 1865 aa22.44■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Adamtsl3G3UXC7 1706 aa22.44■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Nos1Q9Z0J4 1429 aa22.43■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Fhod3Q76LL6 1578 aa22.42■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 SphkapQ6NSW3 1687 aa22.4■■□□□ 1.18
Sec61a2-209ENSMUST00000193792 Il16O54824 1322 aa22.39■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 3425401B19RikD3Z1D3 1412 aa22.39■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Fmn2Q9JL04 1578 aa22.38■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Trpm1Q2TV84 1622 aa22.36■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Map3k5O35099 1380 aa22.36■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Dennd4bQ3U1Y4 1499 aa22.35■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Adgrl2Q8JZZ7 1487 aa22.35■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Safb2Q80YR5 991 aaKnown RBP22.34■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Znf518aB2RRF6 1478 aaKnown RBP22.34■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Rsph4aQ8BYM7 716 aa22.34■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Rrp7aQ9D1C9 280 aaKnown RBP22.34■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Talpid3E9PV87 1520 aa22.33■■□□□ 1.17
Sec61a2-209ENSMUST00000193792 Plch2A2AP18 1501 aa22.3■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 Gli2Q0VGT2 1544 aa22.3■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 Naip6Q9JIB6 1403 aa22.28■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 Cabp1Q9JLK7 227 aa22.28■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 Brwd3A2AHJ4 1799 aa22.28■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 Cfap65Q3V0B4 1847 aa22.27■■□□□ 1.16
Sec61a2-209ENSMUST00000193792 UacaQ8CGB3 1411 aa22.26■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Uggt2E9Q4X2 1504 aa22.25■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Kdm3bQ6ZPY7 1562 aa22.24■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Xrn1P97789 1719 aaKnown RBP22.24■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Myom2Q14BI5 1463 aa22.22■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 PtprmP28828 1452 aa22.22■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Topbp1Q6ZQF0 1515 aa22.22■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Spag9Q58A65 1321 aaKnown RBP22.22■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 NclP09405 707 aaKnown RBP22.21■■□□□ 1.15
Sec61a2-209ENSMUST00000193792 Rfx7F8VPJ6 1459 aa22.2■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Abca17E9PX95 1733 aa22.2■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Kif3bQ61771 747 aa22.19■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Trpm2Q91YD4 1506 aa22.19■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Supt6hQ62383 1726 aaKnown RBP22.19■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Afap1Q80YS6 731 aa22.18■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 Abca6Q8K441 1624 aa22.18■■□□□ 1.14
Sec61a2-209ENSMUST00000193792 MyclP10166 368 aa22.18■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms