RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Cabp1Q9JLK7 227 aa19.4■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Ncoa2Q61026 1462 aa19.4■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Kdm6bQ5NCY0 1641 aa19.4■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Prex2Q3LAC4 1598 aa19.4■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Abcc5Q9R1X5 1436 aa19.38■□□□□ 0.69
Rnf4-204ENSMUST00000182047 Adcy10Q8C0T9 1614 aa19.37■□□□□ 0.69
Rnf4-204ENSMUST00000182047 UacaQ8CGB3 1411 aa19.35■□□□□ 0.69
Rnf4-204ENSMUST00000182047 Fam163aQ8CAA5 168 aa19.33■□□□□ 0.69
Rnf4-204ENSMUST00000182047 Plekhh2Q8C115 1491 aa19.32■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Dhx57Q6P5D3 1388 aaKnown RBP19.32■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Hspa5P20029 655 aaKnown RBP19.32■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Mapkbp1Q6NS57 1503 aa19.32■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Gm14025A2AP89 1413 aa19.31■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Ccer2J3QPU5 274 aa19.31■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Rrbp1Q99PL5 1605 aaKnown RBP19.3■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Mtus2Q3UHD3 1353 aa19.28■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Zfp644E9QA22 1323 aa19.28■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Abcc1O35379 1528 aa19.28■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Tdrd9Q14BI7 1383 aa19.28■□□□□ 0.68
Rnf4-204ENSMUST00000182047 Ankrd36D3Z4K0 1415 aa19.26■□□□□ 0.67
Rnf4-204ENSMUST00000182047 SphkapQ6NSW3 1687 aa19.25■□□□□ 0.67
Rnf4-204ENSMUST00000182047 Fancd2Q80V62 1450 aa19.25■□□□□ 0.67
Rnf4-204ENSMUST00000182047 Chd1P40201 1711 aa19.23■□□□□ 0.67
Rnf4-204ENSMUST00000182047 Rfx7F8VPJ6 1459 aa19.23■□□□□ 0.67
Rnf4-204ENSMUST00000182047 Adgrb2Q8CGM1 1561 aa19.22■□□□□ 0.67
Rnf4-204ENSMUST00000182047 NclP09405 707 aaKnown RBP19.22■□□□□ 0.67
Rnf4-204ENSMUST00000182047 Mphosph9A6H5Y1 991 aa19.2■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Ifnlr1Q8CGK5 535 aa19.2■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Pelp1Q9DBD5 1123 aaKnown RBP19.18■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Kdm3bQ6ZPY7 1562 aa19.18■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Cul7Q8VE73 1689 aa19.18■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Mlh3A0A1Y7VMP7 1443 aa19.18■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Il16O54824 1322 aa19.17■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Aplp2Q06335 707 aa19.17■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Mapk8ip2Q9ERE9 830 aa19.16■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Fam208aQ69ZR9 1610 aaKnown RBP19.16■□□□□ 0.66
Rnf4-204ENSMUST00000182047 Fhod3Q76LL6 1578 aa19.15■□□□□ 0.66
Rnf4-204ENSMUST00000182047 CenpbP27790 599 aa19.14■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Caskin1Q6P9K8 1431 aa19.12■□□□□ 0.65
Rnf4-204ENSMUST00000182047 NhsB1AV60 1647 aa19.1■□□□□ 0.65
Rnf4-204ENSMUST00000182047 AlkP97793 1621 aa19.1■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Arhgap5P97393 1501 aa19.1■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Ythdc2B2RR83 1445 aaKnown RBP19.1■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Znf608Q56A10 1511 aa19.09■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Trappc8E9PWG2 1437 aa19.08■□□□□ 0.65
Rnf4-204ENSMUST00000182047 Pkd2O35245 966 aa19.07■□□□□ 0.64
Rnf4-204ENSMUST00000182047 Setbp1Q9Z180 1582 aa19.06■□□□□ 0.64
Rnf4-204ENSMUST00000182047 Atp10dQ8K2X1 1416 aa19.05■□□□□ 0.64
Rnf4-204ENSMUST00000182047 Naip5Q9R016 1403 aa19.04■□□□□ 0.64
Rnf4-204ENSMUST00000182047 PtprtQ99M80 1454 aa19.04■□□□□ 0.64
Rnf4-204ENSMUST00000182047 Zbtb7cQ8VCZ7 619 aa19.03■□□□□ 0.64
Rnf4-204ENSMUST00000182047 Gm32742A0A1B0GT42 1604 aa19.02■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Sart1Q9Z315 806 aaKnown RBP19.01■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Ttll5Q8CHB8 1328 aa19.01■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Rnf17Q99MV7 1640 aa19.01■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Rrp7aQ9D1C9 280 aaKnown RBP19■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Usp47Q8BY87 1376 aa18.99■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Gapvd1Q6PAR5 1458 aa18.99■□□□□ 0.63
Rnf4-204ENSMUST00000182047 SafbD3YXK2 937 aaKnown RBP18.98■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Hnrnpul2Q00PI9 745 aaKnown RBP18.98■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Supt6hQ62383 1726 aaKnown RBP18.98■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Abca8bQ8K440 1620 aa18.98■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Kiaa1210E9Q0C6 1637 aa18.98■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Arid3cA6PWV5 409 aa18.97■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Trak1Q6PD31 939 aa18.97■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Fmn2Q9JL04 1578 aa18.97■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Pabpn1Q8CCS6 302 aaKnown RBP18.97■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Dhx9O70133 1380 aaKnown RBP18.96■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Nup155Q99P88 1391 aaKnown RBP18.96■□□□□ 0.63
Rnf4-204ENSMUST00000182047 Lamc1P02468 1607 aaKnown RBP18.95■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Wdr7Q920I9 1489 aa18.95■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Igf1rQ60751 1373 aa18.94■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Rprd2Q6NXI6 1469 aaKnown RBP18.93■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Lrrc9Q8CDN9 1456 aa18.93■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Map4P27546 1125 aaKnown RBP18.93■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Ssh2Q5SW75 1423 aa18.92■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Pdcd11Q6NS46 1862 aaKnown RBP18.92■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Trpm2Q91YD4 1506 aa18.91■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Kif21bQ9QXL1 1668 aa18.91■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Sin3aQ60520 1274 aaKnown RBP18.91■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Cfap74Q3UY96 1578 aa18.9■□□□□ 0.62
Rnf4-204ENSMUST00000182047 Adgrl2Q8JZZ7 1487 aa18.89■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Abcc3B2RX12 1523 aa18.88■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Cdc42bpbQ7TT50 1713 aa18.88■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Gm13697A2AK42 830 aa18.87■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Pik3c2gO70167 1506 aa18.87■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Map3k5O35099 1380 aa18.87■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Cep170Q6A065 1588 aa18.86■□□□□ 0.61
Rnf4-204ENSMUST00000182047 AI481877A2ALV5 1481 aa18.85■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Camsap2Q8C1B1 1461 aa18.85■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Rgl3Q3UYI5 709 aa18.85■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Kif14L0N7N1 1674 aaKnown RBP18.84■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Kidins220E9Q9B7 1793 aa18.84■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Mast1Q9R1L5 1570 aa18.84■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Asxl1P59598 1514 aa18.84■□□□□ 0.61
Rnf4-204ENSMUST00000182047 Zfyve16Q80U44 1528 aa18.81■□□□□ 0.6
Rnf4-204ENSMUST00000182047 Hecw1Q8K4P8 1604 aa18.8■□□□□ 0.6
Rnf4-204ENSMUST00000182047 Spag9Q58A65 1321 aaKnown RBP18.79■□□□□ 0.6
Rnf4-204ENSMUST00000182047 Gm156Q58A37 223 aa18.78■□□□□ 0.6
Rnf4-204ENSMUST00000182047 Fam71e1A1L3C1 212 aa18.78■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms