RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Txndc2Q6P902 515 aa10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Fam193aQ8CGI1 1231 aaKnown RBP10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Nol10Q5RJG1 687 aaKnown RBP10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Znf330Q922H9 316 aa10.27□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Dhx16G3X8X0 1044 aaKnown RBP10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Hsp90ab1P11499 724 aaKnown RBP10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Sall2Q9QX96 1004 aa10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 CrebrfQ8CDG5 640 aaKnown RBP10.25□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Ddx54Q8K4L0 874 aaKnown RBP10.25□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Erich4Q3UNU4 136 aa10.24□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Mroh3A0A1D5RM54 893 aa10.23□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 BcanQ61361 883 aa10.23□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Cyb5rlB1AS42 316 aa10.22□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Pcgf6Q99NA9 353 aa10.22□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Rbm5Q91YE7 815 aaKnown RBP10.21□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 CgnP59242 1191 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Tex13c2A0A0G2JGA3 530 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Pus7B7ZNL8 666 aaKnown RBP10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Mapk8ip3Q9ESN9 1337 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Slc4a3P16283 1227 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 B4galnt3Q6L8S8 986 aa10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Kri1Q8VDQ9 704 aaKnown RBP10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Eva1cP58659 440 aa10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 FosbP13346 338 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Themis2Q91YX0 663 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Trim44Q9QXA7 346 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Rtf1A2AQ19 715 aaKnown RBP10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Mrs2Q5NCE8 434 aa10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Podxl2Q8CAE9 603 aa10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Chmp4cQ9D7F7 232 aa10.15□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Q3TQI7 289 aaKnown RBP10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Eif4g2Q62448 906 aaKnown RBP10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Brpf1B2RRD7 1212 aa10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Tmco5bQ80X59 307 aa10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 AppP12023 770 aa10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Rbm25B2RY56 838 aaKnown RBP10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Bcl2l13P59017 434 aa10.12□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Abl1P00520 1123 aa10.11□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Ppp1r1bQ60829 194 aa10.11□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Cc2d1aQ8K1A6 943 aa10.1□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 A0A0U1RNP2 1173 aa10.1□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Psmd1Q3TXS7 953 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 MecomP14404 1042 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Ccdc43Q9CR29 222 aaKnown RBP10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 IkQ9Z1M8 557 aaKnown RBP10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Tut1Q8R3F9 869 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Krt82Q99M74 516 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Gpatch11Q3UFS4 262 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Iffo2Q8R2V2 512 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 CanxP35564 591 aaKnown RBP10.07□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Slc4a10Q5DTL9 1118 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Anp32aO35381 247 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Cluap1Q8R3P7 413 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Evi5lH3BKQ3 813 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccdc180J3QNE4 1664 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Iqcf3Q9D498 203 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Casc1Q6TDU8 730 aa10.04□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Bicdl1A0JNT9 577 aa10.04□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Rsph6aQ8CDR2 708 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Drc7Q6V3W6 876 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 HdgfP51859 237 aaKnown RBP10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccp110Q7TSH4 1004 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccdc9Q8VC31 543 aaKnown RBP10.02□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Ell2Q3UKU1 639 aa10.01□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Calr4Q3TQS0 420 aa10.01□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Zcwpw1Q6IR42 630 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Frat2Q8K025 231 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Serpina10Q8R121 448 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 AknaQ80VW7 1404 aa9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Rad54l2Q99NG0 1466 aa9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 SrrtQ99MR6 875 aaKnown RBP9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Nop9Q8BMC4 636 aaKnown RBP9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Cbx1P83917 185 aaKnown RBP9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Cabp4Q8VHC5 271 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 GorabQ8BRM2 368 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Erich6bQ9D4S6 220 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 CrbnQ8C7D2 445 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Clip1Q922J3 1391 aa9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Odf2A3KGV1 830 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Eif2s2Q99L45 331 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 BlmO88700 1416 aa9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Tpd52l2Q9CYZ2 220 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Zfp777B9EKF4 885 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Card11Q8CIS0 1159 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Dnai2A2AC93 623 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Plekhg5Q66T02 1073 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Tpd52l1O54818 204 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Utp3Q9JI13 469 aaKnown RBP9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 G430095P16RikE9Q913 147 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Skap1Q3UUV5 355 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Neurod6P48986 337 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 WaplQ65Z40 1200 aaKnown RBP9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Rnf216P58283 853 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Acsbg1Q99PU5 721 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Ap3b2Q9JME5 1082 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Strn4P58404 760 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Egfem1Q8C088 590 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Polr3gQ6NXY9 223 aa9.92□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Clstn2Q9ER65 966 aa9.92□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Kiaa1211Q5PR69 1207 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms