RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Phf14Q9D4H9 881 aa7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Mfap1aC0HKD8 439 aaKnown RBP7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Mfap1bC0HKD9 439 aaKnown RBP7.61□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Setd5Q5XJV7 1441 aa7.6□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Smg6P61406 1418 aaKnown RBP7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Vgll3P85442 326 aa7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Fam13bQ8K2H3 851 aa7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 PtmsQ9D0J8 101 aaKnown RBP7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 AampJ3QN89 436 aa7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 KnstrnQ9D9Z1 312 aaKnown RBP7.59□□□□□ -1.19
Ubr4-201ENSMUST00000097822 Pcmtd1P59913 357 aa7.59□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Paxip1Q6NZQ4 1056 aa7.58□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Grwd1Q810D6 446 aaKnown RBP7.58□□□□□ -1.2
Ubr4-201ENSMUST00000097822 RdxP26043 583 aaKnown RBP7.58□□□□□ -1.2
Ubr4-201ENSMUST00000097822 CntlnA2AM05 1397 aa7.58□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Washc2Q6PGL7 1334 aa7.56□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Fhad1A6PWD2 1420 aa7.56□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Mia2Q91ZV0 1396 aa7.56□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Mak16Q8BGS0 296 aaKnown RBP7.56□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Ak7Q9D2H2 614 aa7.56□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Zscan21Q07231 555 aa7.55□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Rsph3aQ3UFY4 516 aa7.55□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Cluap1Q8R3P7 413 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Speer4f1Q9D5Q6 258 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Dusp27Q148W8 1138 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Zfp777B9EKF4 885 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Ttll13A4Q9F6 804 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Eea1Q8BL66 1411 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Pdia4P08003 638 aaKnown RBP7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Znf771Q8BJ90 317 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 Atp1b4Q99ME6 356 aa7.53□□□□□ -1.2
Ubr4-201ENSMUST00000097822 GorabQ8BRM2 368 aa7.52□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Taf3Q5HZG4 932 aa7.52□□□□□ -1.21
Ubr4-201ENSMUST00000097822 SetQ9EQU5 289 aaKnown RBP7.52□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Q8BT18 775 aa7.52□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Samd1D3YXK1 519 aa7.52□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Kif20aP97329 887 aa7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Npm1Q61937 292 aaKnown RBP7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Cald1E9QA15 768 aaKnown RBP7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Plppr3Q7TPB0 716 aa7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Mrvi1Q9WUX5 899 aaKnown RBP7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Golga3P55937 1487 aa7.51□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Rfx1P48377 963 aa7.5□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Hsp90b1P08113 802 aaKnown RBP7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Cspp1B2RX88 1205 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Chmp4bQ9D8B3 224 aaKnown RBP7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Tomm22Q9CPQ3 142 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Prkrip1Q9CWV6 186 aaKnown RBP7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Pnmal2G3X9N3 661 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Rb1cc1Q9ESK9 1588 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Kif3aP28741 701 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 CrbnQ8C7D2 445 aa7.49□□□□□ -1.21
Ubr4-201ENSMUST00000097822 AcrbpQ3V140 540 aa7.48□□□□□ -1.21
Ubr4-201ENSMUST00000097822 MccE9PWI3 1003 aa7.48□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Rabep1O35551 862 aa7.48□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Rundc1Q0VDN7 615 aa7.48□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Kcnh8P59111 1102 aa7.47□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Ccdc183A2AJB1 534 aa7.46□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Ralbp1Q62172 648 aa7.46□□□□□ -1.21
Ubr4-201ENSMUST00000097822 Baz1bQ9Z277 1479 aa7.46□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Gripap1Q8VD04 806 aa7.46□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Ylpm1Q9R0I7 1386 aaKnown RBP7.46□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Casq1O09165 405 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Mroh3A0A1D5RM54 893 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 CgnP59242 1191 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 PnnO35691 725 aaKnown RBP7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Anp32eP97822 260 aaKnown RBP7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Clstn2Q9ER65 966 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Tpd52l1O54818 204 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Glipr1l2Q9CQ35 332 aa7.45□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Cbx1P83917 185 aaKnown RBP7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Liat1Q810M6 228 aa7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Ubap1lG3UW59 384 aa7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Fez1Q8K0X8 392 aa7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Pkd2O35245 966 aa7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Kdm2aP59997 1161 aa7.44□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Plcd3Q8K2J0 785 aa7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Tnpo1Q8BFY9 898 aaKnown RBP7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Ccdc88bQ4QRL3 1481 aa7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Sf3a1Q8K4Z5 791 aaKnown RBP7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 HnrnpuQ8VEK3 800 aaKnown RBP7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Arhgap27A2AB59 869 aa7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Utp3Q9JI13 469 aaKnown RBP7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Ccdc173A0JLY1 547 aa7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Zhx1P70121 873 aa7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Rnf214Q8BFU3 668 aaKnown RBP7.43□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Znf330Q922H9 316 aa7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Slc4a2P13808 1237 aaKnown RBP7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Kif4P33174 1231 aa7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Aebp1Q640N1 1128 aa7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Dixdc1Q80Y83 711 aa7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Isy1Q69ZQ2 285 aaKnown RBP7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Golga2Q921M4 999 aa7.42□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Cwc15Q9JHS9 229 aaKnown RBP7.41□□□□□ -1.22
Ubr4-201ENSMUST00000097822 KarsQ99MN1 595 aaKnown RBP7.41□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Ssh1Q76I79 1042 aa7.41□□□□□ -1.22
Ubr4-201ENSMUST00000097822 CalrP14211 416 aaKnown RBP7.41□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Fkbp15Q6P9Q6 1216 aaKnown RBP7.41□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Cep162Q6ZQ06 1403 aa7.4□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Tmem132aQ922P8 1018 aa7.4□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms