RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Skiv2lQ6NZR5 1244 aa14.8□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Eya1P97767 591 aa14.79□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Tpcn2Q8BWC0 731 aa14.79□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Apba1B2RUJ5 842 aa14.78□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Mnx1Q9QZW9 404 aa14.78□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Dmrta2A2A9A2 531 aa14.77□□□□□ -0.05
Ccdc54-201ENSMUST00000062439 Ffar3Q3UFD7 319 aa14.77□□□□□ -0.05
Ccdc54-201ENSMUST00000062439 Ripply1Q2WG77 201 aa14.72□□□□□ -0.05
Ccdc54-201ENSMUST00000062439 Prr7Q3V0I2 269 aa14.71□□□□□ -0.05
Ccdc54-201ENSMUST00000062439 PrimpolQ6P1E7 537 aa14.71□□□□□ -0.05
Ccdc54-201ENSMUST00000062439 LipiF6YQT7 476 aa14.69□□□□□ -0.06
Ccdc54-201ENSMUST00000062439 XpcP51612 930 aa14.69□□□□□ -0.06
Ccdc54-201ENSMUST00000062439 Inpp5dQ9ES52 1191 aa14.68□□□□□ -0.06
Ccdc54-201ENSMUST00000062439 Fndc3aQ8BX90 1198 aa14.67□□□□□ -0.06
Ccdc54-201ENSMUST00000062439 Slc12a5Q91V14 1138 aa14.66□□□□□ -0.06
Ccdc54-201ENSMUST00000062439 OscarQ8VBT3 265 aa14.63□□□□□ -0.07
Ccdc54-201ENSMUST00000062439 Mink1Q9JM52 1308 aa14.63□□□□□ -0.07
Ccdc54-201ENSMUST00000062439 GcgrQ61606 485 aa14.62□□□□□ -0.07
Ccdc54-201ENSMUST00000062439 GopcQ8BH60 463 aa14.61□□□□□ -0.07
Ccdc54-201ENSMUST00000062439 Tor1aip2Q8BYU6 502 aa14.6□□□□□ -0.07
Ccdc54-201ENSMUST00000062439 Prom2Q3UUY6 835 aa14.56□□□□□ -0.08
Ccdc54-201ENSMUST00000062439 ZxdbA2CE44 873 aa14.53□□□□□ -0.08
Ccdc54-201ENSMUST00000062439 RydenQ8CAK3 290 aaKnown RBP14.53□□□□□ -0.08
Ccdc54-201ENSMUST00000062439 Prrt3Q6PE13 971 aa14.52□□□□□ -0.09
Ccdc54-201ENSMUST00000062439 Lrfn2Q80TG9 788 aa14.52□□□□□ -0.09
Ccdc54-201ENSMUST00000062439 GnpatP98192 678 aa14.5□□□□□ -0.09
Ccdc54-201ENSMUST00000062439 Ppfibp2O35711 882 aa14.47□□□□□ -0.09
Ccdc54-201ENSMUST00000062439 Masp1P98064 704 aa14.46□□□□□ -0.09
Ccdc54-201ENSMUST00000062439 ArxO35085 564 aa14.45□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Aldh16a1Q571I9 802 aa14.44□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Neurod1Q60867 357 aa14.44□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Hs1bp3Q3TC93 395 aa14.43□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Foxd4Q60688 444 aa14.43□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Dnm1lQ8K1M6 742 aa14.41□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Clec2iQ9WVF9 217 aa14.41□□□□□ -0.1
Ccdc54-201ENSMUST00000062439 Map2k5Q9WVS7 448 aa14.38□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Gpr37Q9QY42 600 aa14.37□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Znf330Q922H9 316 aa14.36□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Uri1Q3TLD5 531 aa14.34□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Gimap6Q8K349 305 aa14.34□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Ccdc96Q9CR92 584 aa14.34□□□□□ -0.11
Ccdc54-201ENSMUST00000062439 Pcmtd1P59913 357 aa14.33□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Unc5aQ8K1S4 898 aa14.33□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 JmyQ9QXM1 983 aa14.33□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Adra2bP30545 450 aa14.31□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Plekhg3Q4VAC9 1341 aa14.3□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Dkk1O54908 272 aa14.29□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Brpf1B2RRD7 1212 aa14.28□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Psen1P49769 467 aa14.28□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Fam181bQ80VF6 417 aa14.28□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Alkbh8Q80Y20 664 aa14.28□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 Os9Q8K2C7 672 aa14.28□□□□□ -0.12
Ccdc54-201ENSMUST00000062439 UbtfP25976 765 aaKnown RBP14.27□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Fbxo31Q3TQF0 507 aa14.24□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Fchsd2Q3USJ8 740 aa14.24□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Onecut3Q8K557 490 aa14.24□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Pdcd7Q9WTY1 482 aa14.23□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Hic1Q9R1Y5 733 aa14.22□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Fxr2Q9WVR4 673 aaKnown RBP14.22□□□□□ -0.13
Ccdc54-201ENSMUST00000062439 Irf5P56477 497 aa14.2□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Rpusd2Q149F1 553 aa14.19□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 PsdQ5DTT2 1024 aa14.19□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Kri1Q8VDQ9 704 aaKnown RBP14.18□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Crim1Q9JLL0 1037 aa14.18□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 LtbrP50284 415 aa14.17□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Dnajc5gQ8C632 165 aa14.16□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Msh5Q9QUM7 833 aa14.16□□□□□ -0.14
Ccdc54-201ENSMUST00000062439 Gga1Q8R0H9 635 aa14.14□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Tmc3Q7TQ69 1130 aa14.13□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Ppfia1B2RXQ2 1266 aa14.12□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Axin1O35625 863 aa14.12□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Dab2P98078 766 aa14.12□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Rad21Q61550 635 aaKnown RBP14.11□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Mllt6B1AR10 1109 aa14.09□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Retreg3Q9CQV4 466 aa14.09□□□□□ -0.15
Ccdc54-201ENSMUST00000062439 Chst12Q99LL3 419 aa14.07□□□□□ -0.16
Ccdc54-201ENSMUST00000062439 Kiaa1522A2A7S8 1013 aa14.06□□□□□ -0.16
Ccdc54-201ENSMUST00000062439 Map3k7Q62073 579 aa14.06□□□□□ -0.16
Ccdc54-201ENSMUST00000062439 Farp1F8VPU2 1048 aa14.04□□□□□ -0.16
Ccdc54-201ENSMUST00000062439 Psme1P97371 249 aa14.03□□□□□ -0.16
Ccdc54-201ENSMUST00000062439 Tsr1Q5SWD9 803 aa14.01□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Scaf8Q6DID3 1268 aa14.01□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Ier5lQ99J55 406 aa14.01□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Gpatch8A2A6A1 1505 aa14□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Hoxa2P31245 372 aa13.99□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 NppbP40753 121 aa13.99□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Nob1Q8BW10 403 aa13.99□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Gm35339A0A140LHH9 1649 aa13.99□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Neurod2Q62414 383 aa13.98□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Fkbp15Q6P9Q6 1216 aaKnown RBP13.98□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Dixdc1Q80Y83 711 aa13.98□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 Nudt12Q9DCN1 462 aa13.97□□□□□ -0.17
Ccdc54-201ENSMUST00000062439 NclP09405 707 aaKnown RBP13.95□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Kcnv2Q8CFS6 562 aa13.95□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Irx5Q9JKQ4 484 aa13.95□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Phox2bO35690 314 aa13.94□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Recql4Q75NR7 1216 aaKnown RBP13.94□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Pxylp1Q8BHA9 480 aa13.92□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Themis2Q91YX0 663 aa13.92□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Lhx6Q9R1R0 363 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms