RNA–Protein interactions for RNA: ENSMUST00000037117.5

Gtf3c4-201, Transcript of General transcription factor 3C polypeptide 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gtf3c4, Length 6,941 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-201ENSMUST00000037117 Arid3cA6PWV5 409 aa15.15■□□□□ 0.02
Gtf3c4-201ENSMUST00000037117 Ccar1Q8CH18 1146 aaKnown RBP15.14■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Pip4k2bQ80XI4 416 aa15.13■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Wdr78E9PYY5 807 aa15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Eif4g2Q62448 906 aaKnown RBP15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Fam193aQ8CGI1 1231 aaKnown RBP15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Znf330Q922H9 316 aa15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Wdr43Q6ZQL4 677 aaKnown RBP15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 MycnP03966 462 aaKnown RBP15.12■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Kif15Q6P9L6 1387 aa15.11■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Rtf1A2AQ19 715 aaKnown RBP15.11■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Plagl1Q9JLQ4 704 aa15.11■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Birc3O08863 600 aa15.11■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Psme1P97371 249 aa15.08■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Hs1bp3Q3TC93 395 aa15.08■□□□□ 0.01
Gtf3c4-201ENSMUST00000037117 Erich6bQ9D4S6 220 aa15.08■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Iffo2Q8R2V2 512 aa15.07■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Sytl4Q9R0Q1 673 aa15.07■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Clstn2Q9ER65 966 aa15.07■□□□□ 0
Gtf3c4-201ENSMUST00000037117 BlmO88700 1416 aa15.06■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Kri1Q8VDQ9 704 aaKnown RBP15.06■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Kif7B7ZNG0 1348 aa15.05■□□□□ 0
Gtf3c4-201ENSMUST00000037117 Tmco5bQ80X59 307 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Rsf1E9PWW9 1441 aaKnown RBP15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Ercc6F8VPZ5 1481 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Slc4a3P16283 1227 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Gpatch11Q3UFS4 262 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Ofd1Q80Z25 1017 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Bcl11aQ9QYE3 773 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Iqcf3Q9D498 203 aa15.04■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Tcerg1Q8CGF7 1100 aaKnown RBP15.03■□□□□ -0
Gtf3c4-201ENSMUST00000037117 MecomP14404 1042 aa15.03■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Q3TQI7 289 aaKnown RBP15.03■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Brpf1B2RRD7 1212 aa15.02■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Txndc2Q6P902 515 aa15.02■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Anks4bQ8K3X6 423 aa15.02■□□□□ -0
Gtf3c4-201ENSMUST00000037117 Golga3P55937 1487 aa15.01□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Wwc2Q6NXJ0 1187 aa15.01□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Arid3aQ62431 601 aa15□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Dhx16G3X8X0 1044 aaKnown RBP14.99□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Sugp2Q8CH09 1067 aa14.98□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Ccdc9Q8VC31 543 aaKnown RBP14.98□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Tnnt2P50752 301 aa14.98□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Cdca7Q9D0M2 382 aa14.97□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Kcnn1Q9EQR3 537 aa14.96□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Card11Q8CIS0 1159 aa14.96□□□□□ -0.01
Gtf3c4-201ENSMUST00000037117 Dnai2A2AC93 623 aa14.95□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Krt82Q99M74 516 aa14.95□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Skida1Q80YR3 822 aa14.94□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Cluap1Q8R3P7 413 aa14.94□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 ArsiQ32KI9 573 aa14.93□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Tpm3-rs7D3Z2H9 248 aa14.92□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Ccdc43Q9CR29 222 aaKnown RBP14.92□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Setd5Q5XJV7 1441 aa14.92□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Ftsj3Q9DBE9 838 aaKnown RBP14.91□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 MccE9PWI3 1003 aa14.91□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 AppP12023 770 aa14.91□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 A0A0U1RNP2 1173 aa14.9□□□□□ -0.02
Gtf3c4-201ENSMUST00000037117 Cnksr2Q80YA9 1032 aa14.89□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 GorabQ8BRM2 368 aa14.89□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Fbln2P37889 1221 aa14.89□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Erich4Q3UNU4 136 aa14.89□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Drc7Q6V3W6 876 aa14.89□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 FosbP13346 338 aa14.88□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 HdgfP51859 237 aaKnown RBP14.88□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Ccdc18Q640L5 1455 aa14.87□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Tpd52l1O54818 204 aa14.87□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 BcanQ61361 883 aa14.87□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Slc4a10Q5DTL9 1118 aa14.87□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 1700123L14RikQ3V2K7 440 aa14.85□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Kdm4aQ8BW72 1064 aa14.84□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Chmp4cQ9D7F7 232 aa14.84□□□□□ -0.03
Gtf3c4-201ENSMUST00000037117 Pds5bQ4VA53 1446 aaKnown RBP14.83□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Eva1cP58659 440 aa14.83□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Znf697Q569E7 569 aa14.83□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Cc2d1aQ8K1A6 943 aa14.83□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Map7O88735 730 aa14.82□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Znf428Q8C1M2 176 aa14.82□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Odf2A3KGV1 830 aaKnown RBP14.81□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 NudcO35685 332 aaKnown RBP14.81□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Themis2Q91YX0 663 aa14.81□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Sycp2Q9CUU3 1500 aa14.8□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Rbm19Q8R3C6 952 aaKnown RBP14.8□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Ccp110Q7TSH4 1004 aa14.8□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Rsph6aQ8CDR2 708 aa14.8□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Rbm5Q91YE7 815 aaKnown RBP14.8□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Ccer2J3QPU5 274 aa14.79□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Sf3b2Q3UJB0 878 aaKnown RBP14.78□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Adam1bQ8R534 806 aa14.77□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 Ccer1Q9CQL2 403 aa14.77□□□□□ -0.04
Gtf3c4-201ENSMUST00000037117 R3hcc1Q8BSI6 488 aa14.77□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 U2af1Q9D883 239 aaKnown RBP14.77□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Gm21969J3QJZ1 289 aa14.76□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Abl1P00520 1123 aa14.76□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 SetQ9EQU5 289 aaKnown RBP14.75□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Sart3Q9JLI8 962 aaKnown RBP14.75□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Speer4f1Q9D5Q6 258 aa14.75□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Dnttip2Q8R2M2 758 aaKnown RBP14.75□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Mfap1aC0HKD8 439 aaKnown RBP14.74□□□□□ -0.05
Gtf3c4-201ENSMUST00000037117 Mfap1bC0HKD9 439 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms