RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Fhod3Q76LL6 1578 aa33.42■■■□□ 2.94
Cln6-201ENSMUST00000034776 AknaQ80VW7 1404 aa33.39■■■□□ 2.94
Cln6-201ENSMUST00000034776 Kdm6bQ5NCY0 1641 aa33.39■■■□□ 2.94
Cln6-201ENSMUST00000034776 Plekhh2Q8C115 1491 aa33.37■■■□□ 2.93
Cln6-201ENSMUST00000034776 Cabp1Q9JLK7 227 aa33.37■■■□□ 2.93
Cln6-201ENSMUST00000034776 Prex2Q3LAC4 1598 aa33.35■■■□□ 2.93
Cln6-201ENSMUST00000034776 Cul7Q8VE73 1689 aa33.28■■■□□ 2.92
Cln6-201ENSMUST00000034776 Il16O54824 1322 aa33.27■■■□□ 2.92
Cln6-201ENSMUST00000034776 Mlh3A0A1Y7VMP7 1443 aa33.26■■■□□ 2.91
Cln6-201ENSMUST00000034776 Mtus2Q3UHD3 1353 aa33.25■■■□□ 2.91
Cln6-201ENSMUST00000034776 Gm14025A2AP89 1413 aa33.24■■■□□ 2.91
Cln6-201ENSMUST00000034776 Fancd2Q80V62 1450 aa33.23■■■□□ 2.91
Cln6-201ENSMUST00000034776 Hspa5P20029 655 aaKnown RBP33.22■■■□□ 2.91
Cln6-201ENSMUST00000034776 Ube2uB1AUC4 352 aa33.21■■■□□ 2.91
Cln6-201ENSMUST00000034776 NclP09405 707 aaKnown RBP33.21■■■□□ 2.91
Cln6-201ENSMUST00000034776 SphkapQ6NSW3 1687 aa33.2■■■□□ 2.91
Cln6-201ENSMUST00000034776 Kdm3bQ6ZPY7 1562 aa33.19■■■□□ 2.9
Cln6-201ENSMUST00000034776 Fkbp15Q6P9Q6 1216 aaKnown RBP33.19■■■□□ 2.9
Cln6-201ENSMUST00000034776 Caskin1Q6P9K8 1431 aa33.18■■■□□ 2.9
Cln6-201ENSMUST00000034776 Setbp1Q9Z180 1582 aa33.17■■■□□ 2.9
Cln6-201ENSMUST00000034776 Cdk11bP24788 784 aaKnown RBP33.17■■■□□ 2.9
Cln6-201ENSMUST00000034776 Fam208aQ69ZR9 1610 aaKnown RBP33.16■■■□□ 2.9
Cln6-201ENSMUST00000034776 Abcc1O35379 1528 aa33.15■■■□□ 2.9
Cln6-201ENSMUST00000034776 Mphosph9A6H5Y1 991 aa33.15■■■□□ 2.9
Cln6-201ENSMUST00000034776 Chd1P40201 1711 aa33.13■■■□□ 2.89
Cln6-201ENSMUST00000034776 Tdrd9Q14BI7 1383 aa33.1■■■□□ 2.89
Cln6-201ENSMUST00000034776 Adgrb2Q8CGM1 1561 aa33.08■■■□□ 2.89
Cln6-201ENSMUST00000034776 Zfp644E9QA22 1323 aa33.03■■■□□ 2.88
Cln6-201ENSMUST00000034776 Ppargc1bQ8VHJ7 1014 aa33.02■■■□□ 2.88
Cln6-201ENSMUST00000034776 Kiaa1210E9Q0C6 1637 aa33.01■■■□□ 2.87
Cln6-201ENSMUST00000034776 Naip5Q9R016 1403 aa33.01■■■□□ 2.87
Cln6-201ENSMUST00000034776 AlkP97793 1621 aa33■■■□□ 2.87
Cln6-201ENSMUST00000034776 NhsB1AV60 1647 aa33■■■□□ 2.87
Cln6-201ENSMUST00000034776 Lamc1P02468 1607 aaKnown RBP33■■■□□ 2.87
Cln6-201ENSMUST00000034776 Camsap2Q8C1B1 1461 aa32.99■■■□□ 2.87
Cln6-201ENSMUST00000034776 Wdr7Q920I9 1489 aa32.97■■■□□ 2.87
Cln6-201ENSMUST00000034776 Rnf17Q99MV7 1640 aa32.95■■■□□ 2.87
Cln6-201ENSMUST00000034776 Kif21bQ9QXL1 1668 aa32.91■■■□□ 2.86
Cln6-201ENSMUST00000034776 Pdcd11Q6NS46 1862 aaKnown RBP32.89■■■□□ 2.86
Cln6-201ENSMUST00000034776 Gm32742A0A1B0GT42 1604 aa32.88■■■□□ 2.85
Cln6-201ENSMUST00000034776 Fmn2Q9JL04 1578 aa32.87■■■□□ 2.85
Cln6-201ENSMUST00000034776 Pkd2O35245 966 aa32.87■■■□□ 2.85
Cln6-201ENSMUST00000034776 Arhgap5P97393 1501 aa32.85■■■□□ 2.85
Cln6-201ENSMUST00000034776 Rprd2Q6NXI6 1469 aaKnown RBP32.84■■■□□ 2.85
Cln6-201ENSMUST00000034776 Trpm2Q91YD4 1506 aa32.83■■■□□ 2.85
Cln6-201ENSMUST00000034776 Abca8bQ8K440 1620 aa32.81■■■□□ 2.84
Cln6-201ENSMUST00000034776 Gm13697A2AK42 830 aa32.8■■■□□ 2.84
Cln6-201ENSMUST00000034776 Adgrl2Q8JZZ7 1487 aa32.8■■■□□ 2.84
Cln6-201ENSMUST00000034776 Cfap74Q3UY96 1578 aa32.79■■■□□ 2.84
Cln6-201ENSMUST00000034776 Igf1rQ60751 1373 aa32.78■■■□□ 2.84
Cln6-201ENSMUST00000034776 Trappc8E9PWG2 1437 aa32.77■■■□□ 2.84
Cln6-201ENSMUST00000034776 Atp10dQ8K2X1 1416 aa32.77■■■□□ 2.84
Cln6-201ENSMUST00000034776 Usp47Q8BY87 1376 aa32.76■■■□□ 2.84
Cln6-201ENSMUST00000034776 Ythdc2B2RR83 1445 aaKnown RBP32.76■■■□□ 2.84
Cln6-201ENSMUST00000034776 Mast1Q9R1L5 1570 aa32.76■■■□□ 2.83
Cln6-201ENSMUST00000034776 Pik3c2gO70167 1506 aa32.75■■■□□ 2.83
Cln6-201ENSMUST00000034776 Neurl4Q5NCX5 1563 aa32.75■■■□□ 2.83
Cln6-201ENSMUST00000034776 Supt6hQ62383 1726 aaKnown RBP32.74■■■□□ 2.83
Cln6-201ENSMUST00000034776 Ttll5Q8CHB8 1328 aa32.74■■■□□ 2.83
Cln6-201ENSMUST00000034776 Nup155Q99P88 1391 aaKnown RBP32.7■■■□□ 2.83
Cln6-201ENSMUST00000034776 Abcc3B2RX12 1523 aa32.7■■■□□ 2.83
Cln6-201ENSMUST00000034776 Neurod1Q60867 357 aa32.66■■■□□ 2.82
Cln6-201ENSMUST00000034776 Sart1Q9Z315 806 aaKnown RBP32.66■■■□□ 2.82
Cln6-201ENSMUST00000034776 Lrrc9Q8CDN9 1456 aa32.65■■■□□ 2.82
Cln6-201ENSMUST00000034776 Nop58Q6DFW4 536 aaKnown RBP32.65■■■□□ 2.82
Cln6-201ENSMUST00000034776 Pprc1Q6NZN1 1644 aa32.64■■■□□ 2.82
Cln6-201ENSMUST00000034776 Hecw1Q8K4P8 1604 aa32.64■■■□□ 2.82
Cln6-201ENSMUST00000034776 PtprtQ99M80 1454 aa32.63■■■□□ 2.81
Cln6-201ENSMUST00000034776 Znf608Q56A10 1511 aa32.63■■■□□ 2.81
Cln6-201ENSMUST00000034776 Dhx9O70133 1380 aaKnown RBP32.61■■■□□ 2.81
Cln6-201ENSMUST00000034776 Ssh2Q5SW75 1423 aa32.61■■■□□ 2.81
Cln6-201ENSMUST00000034776 Trak1Q6PD31 939 aa32.6■■■□□ 2.81
Cln6-201ENSMUST00000034776 Rrp7aQ9D1C9 280 aaKnown RBP32.59■■■□□ 2.81
Cln6-201ENSMUST00000034776 Gapvd1Q6PAR5 1458 aa32.59■■■□□ 2.81
Cln6-201ENSMUST00000034776 Map4P27546 1125 aaKnown RBP32.59■■■□□ 2.81
Cln6-201ENSMUST00000034776 Cdc42bpbQ7TT50 1713 aa32.58■■■□□ 2.81
Cln6-201ENSMUST00000034776 DroshaQ5HZJ0 1373 aaKnown RBP32.56■■■□□ 2.8
Cln6-201ENSMUST00000034776 Pelp1Q9DBD5 1123 aaKnown RBP32.56■■■□□ 2.8
Cln6-201ENSMUST00000034776 Kif14L0N7N1 1674 aaKnown RBP32.53■■■□□ 2.8
Cln6-201ENSMUST00000034776 PtprgQ05909 1442 aa32.52■■■□□ 2.8
Cln6-201ENSMUST00000034776 Clstn2Q9ER65 966 aa32.51■■■□□ 2.8
Cln6-201ENSMUST00000034776 Kidins220E9Q9B7 1793 aa32.51■■■□□ 2.79
Cln6-201ENSMUST00000034776 AI481877A2ALV5 1481 aa32.5■■■□□ 2.79
Cln6-201ENSMUST00000034776 Prdm16A2A935 1275 aa32.5■■■□□ 2.79
Cln6-201ENSMUST00000034776 Pabpn1Q8CCS6 302 aaKnown RBP32.48■■■□□ 2.79
Cln6-201ENSMUST00000034776 Ifnlr1Q8CGK5 535 aa32.47■■■□□ 2.79
Cln6-201ENSMUST00000034776 Sin3aQ60520 1274 aaKnown RBP32.46■■■□□ 2.79
Cln6-201ENSMUST00000034776 Zfyve16Q80U44 1528 aa32.44■■■□□ 2.78
Cln6-201ENSMUST00000034776 Asxl1P59598 1514 aa32.44■■■□□ 2.78
Cln6-201ENSMUST00000034776 Mapk8ip2Q9ERE9 830 aa32.39■■■□□ 2.78
Cln6-201ENSMUST00000034776 Mbd5B1AYB6 1498 aa32.39■■■□□ 2.78
Cln6-201ENSMUST00000034776 Cep170Q6A065 1588 aa32.38■■■□□ 2.77
Cln6-201ENSMUST00000034776 Spag9Q58A65 1321 aaKnown RBP32.36■■■□□ 2.77
Cln6-201ENSMUST00000034776 Rgl3Q3UYI5 709 aa32.35■■■□□ 2.77
Cln6-201ENSMUST00000034776 Abca9Q8K449 1623 aa32.34■■■□□ 2.77
Cln6-201ENSMUST00000034776 Dot1lQ6XZL8 1540 aa32.33■■■□□ 2.77
Cln6-201ENSMUST00000034776 Map3k5O35099 1380 aa32.31■■■□□ 2.76
Cln6-201ENSMUST00000034776 Cd109Q8R422 1442 aa32.31■■■□□ 2.76
Cln6-201ENSMUST00000034776 Arid3cA6PWV5 409 aa32.3■■■□□ 2.76
Cln6-201ENSMUST00000034776 Abca17E9PX95 1733 aa32.3■■■□□ 2.76
Retrieved 100 of 22,080 RNA–protein pairs in 156.2 ms