RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Abca9Q8K449 1623 aa12.91□□□□□ -0.34
Ssr3-201ENSMUST00000029414 Plekhg3Q4VAC9 1341 aa12.91□□□□□ -0.34
Ssr3-201ENSMUST00000029414 A2mQ6GQT1 1474 aa12.91□□□□□ -0.34
Ssr3-201ENSMUST00000029414 Eea1Q8BL66 1411 aa12.89□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Cul9Q80TT8 1865 aa12.89□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Hecw2Q6I6G8 1578 aa12.89□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Kiaa1551Q5DTW7 1521 aa12.89□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Ncoa3O09000 1398 aa12.87□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Mug1P28665 1476 aa12.86□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Peg3Q3URU2 1571 aa12.86□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Kif14L0N7N1 1674 aaKnown RBP12.86□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Mlh3A0A1Y7VMP7 1443 aa12.85□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Dhx57Q6P5D3 1388 aaKnown RBP12.85□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Kdm6bQ5NCY0 1641 aa12.85□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Qser1A2BIE1 1698 aa12.84□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Fam163aQ8CAA5 168 aa12.84□□□□□ -0.35
Ssr3-201ENSMUST00000029414 Dnajc5gQ8C632 165 aa12.83□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Pdcd11Q6NS46 1862 aaKnown RBP12.8□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Kidins220E9Q9B7 1793 aa12.8□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Synj2Q9D2G5 1434 aa12.8□□□□□ -0.36
Ssr3-201ENSMUST00000029414 CntlnA2AM05 1397 aa12.79□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Ap3b1Q9Z1T1 1105 aa12.78□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Brwd3A2AHJ4 1799 aa12.78□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Gm1043A0A140LJC2 1431 aa12.77□□□□□ -0.36
Ssr3-201ENSMUST00000029414 Arhgap5P97393 1501 aa12.77□□□□□ -0.37
Ssr3-201ENSMUST00000029414 NexmifQ5DTT1 1515 aa12.77□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Naip2Q9QUK4 1447 aa12.76□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Adamtsl3G3UXC7 1706 aa12.76□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Ncapd3Q6ZQK0 1506 aa12.76□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Tiam1Q60610 1591 aa12.75□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Gm32742A0A1B0GT42 1604 aa12.74□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Kdm5cP41230 1554 aa12.74□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Cfap74Q3UY96 1578 aa12.71□□□□□ -0.37
Ssr3-201ENSMUST00000029414 RereQ80TZ9 1558 aa12.71□□□□□ -0.37
Ssr3-201ENSMUST00000029414 OvosQ3UU35 1456 aa12.71□□□□□ -0.37
Ssr3-201ENSMUST00000029414 Adcy10Q8C0T9 1614 aa12.7□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Zmym4A2A791 1549 aaKnown RBP12.7□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Dip2cE9PWR4 1557 aa12.7□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Naip1Q9QWK5 1403 aa12.7□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Abcc3B2RX12 1523 aa12.7□□□□□ -0.38
Ssr3-201ENSMUST00000029414 MlecQ6ZQI3 291 aaKnown RBP12.69□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Supt6hQ62383 1726 aaKnown RBP12.67□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Cdc42bpbQ7TT50 1713 aa12.66□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Atp10aO54827 1508 aa12.66□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Hecw1Q8K4P8 1604 aa12.66□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Lmtk2Q3TYD6 1471 aa12.65□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Caskin1Q6P9K8 1431 aa12.65□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Neurl4Q5NCX5 1563 aa12.65□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Yeats2Q3TUF7 1407 aa12.65□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Ptch1Q61115 1434 aa12.65□□□□□ -0.38
Ssr3-201ENSMUST00000029414 Cfap65Q3V0B4 1847 aa12.64□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Lmod2Q3UHZ5 550 aa12.64□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Trappc8E9PWG2 1437 aa12.64□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Trpm1Q2TV84 1622 aa12.63□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Camsap2Q8C1B1 1461 aa12.63□□□□□ -0.39
Ssr3-201ENSMUST00000029414 NpatQ8BMA5 1420 aa12.63□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Lemd3Q9WU40 921 aa12.63□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Arhgef40Q3UPH7 1517 aa12.61□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Tdrd9Q14BI7 1383 aa12.6□□□□□ -0.39
Ssr3-201ENSMUST00000029414 Cdc42bpgQ80UW5 1551 aa12.59□□□□□ -0.39
Ssr3-201ENSMUST00000029414 PtprmP28828 1452 aa12.57□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Ercc6l2Q9JIM3 1537 aa12.57□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Ccnb3Q810T2 1396 aa12.57□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Abca6Q8K441 1624 aa12.56□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Fhod3Q76LL6 1578 aa12.56□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Talpid3E9PV87 1520 aa12.56□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Xrn1P97789 1719 aaKnown RBP12.54□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Cyb5rlB1AS42 316 aa12.54□□□□□ -0.4
Ssr3-201ENSMUST00000029414 SphkapQ6NSW3 1687 aa12.53□□□□□ -0.4
Ssr3-201ENSMUST00000029414 Mast1Q9R1L5 1570 aa12.52□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Fmn2Q9JL04 1578 aa12.51□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Sart1Q9Z315 806 aaKnown RBP12.51□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Abca17E9PX95 1733 aa12.5□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Nos1Q9Z0J4 1429 aa12.49□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Dennd4bQ3U1Y4 1499 aa12.49□□□□□ -0.41
Ssr3-201ENSMUST00000029414 RictorQ6QI06 1708 aa12.49□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Cdk11bP24788 784 aaKnown RBP12.48□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Myom2Q14BI5 1463 aa12.48□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Gli2Q0VGT2 1544 aa12.48□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Dip2bQ3UH60 1574 aa12.48□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Ahdc1Q6PAL7 1594 aaKnown RBP12.48□□□□□ -0.41
Ssr3-201ENSMUST00000029414 CltcQ68FD5 1675 aaKnown RBP12.47□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Safb2Q80YR5 991 aaKnown RBP12.47□□□□□ -0.41
Ssr3-201ENSMUST00000029414 Topaz1E5FYH1 1653 aa12.46□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Uggt2E9Q4X2 1504 aa12.45□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Map3k5O35099 1380 aa12.44□□□□□ -0.42
Ssr3-201ENSMUST00000029414 MyclP10166 368 aa12.44□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Znf518aB2RRF6 1478 aaKnown RBP12.44□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Plch2A2AP18 1501 aa12.43□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Topbp1Q6ZQF0 1515 aa12.43□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Trpm2Q91YD4 1506 aa12.43□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Naip6Q9JIB6 1403 aa12.43□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Scn4aQ9ER60 1841 aa12.43□□□□□ -0.42
Ssr3-201ENSMUST00000029414 4930407I10RikD3Z5T8 1512 aa12.42□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Knl1Q66JQ7 1612 aa12.41□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Abcc5Q9R1X5 1436 aa12.4□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Myo5cE9Q1F5 1742 aa12.4□□□□□ -0.42
Ssr3-201ENSMUST00000029414 Plekhh2Q8C115 1491 aa12.4□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Senp3Q9EP97 568 aaKnown RBP12.39□□□□□ -0.43
Ssr3-201ENSMUST00000029414 Mtus2Q3UHD3 1353 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms