RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Kiaa1551Q5DTW7 1521 aa25.33■■□□□ 1.65
Ubb-201ENSMUST00000019649 Fam208aQ69ZR9 1610 aaKnown RBP25.31■■□□□ 1.64
Ubb-201ENSMUST00000019649 Peg3Q3URU2 1571 aa25.31■■□□□ 1.64
Ubb-201ENSMUST00000019649 A2mQ6GQT1 1474 aa25.27■■□□□ 1.64
Ubb-201ENSMUST00000019649 Gm1043A0A140LJC2 1431 aa25.25■■□□□ 1.63
Ubb-201ENSMUST00000019649 Mlh3A0A1Y7VMP7 1443 aa25.21■■□□□ 1.63
Ubb-201ENSMUST00000019649 Abca9Q8K449 1623 aa25.2■■□□□ 1.62
Ubb-201ENSMUST00000019649 Rnf17Q99MV7 1640 aa25.2■■□□□ 1.62
Ubb-201ENSMUST00000019649 Tiam1Q60610 1591 aa25.18■■□□□ 1.62
Ubb-201ENSMUST00000019649 Naip1Q9QWK5 1403 aa25.18■■□□□ 1.62
Ubb-201ENSMUST00000019649 NexmifQ5DTT1 1515 aa25.16■■□□□ 1.62
Ubb-201ENSMUST00000019649 Alpk3Q924C5 1678 aa25.13■■□□□ 1.61
Ubb-201ENSMUST00000019649 Kiaa0556Q8C753 1610 aa25.11■■□□□ 1.61
Ubb-201ENSMUST00000019649 Lmod2Q3UHZ5 550 aa25.11■■□□□ 1.61
Ubb-201ENSMUST00000019649 Arhgap5P97393 1501 aa25.08■■□□□ 1.61
Ubb-201ENSMUST00000019649 Hecw2Q6I6G8 1578 aa25.07■■□□□ 1.6
Ubb-201ENSMUST00000019649 Plekhg3Q4VAC9 1341 aa25.05■■□□□ 1.6
Ubb-201ENSMUST00000019649 Dnajc5gQ8C632 165 aa25.04■■□□□ 1.6
Ubb-201ENSMUST00000019649 Synj2Q9D2G5 1434 aa25.03■■□□□ 1.6
Ubb-201ENSMUST00000019649 Lmtk2Q3TYD6 1471 aa25■■□□□ 1.59
Ubb-201ENSMUST00000019649 Kidins220E9Q9B7 1793 aa24.99■■□□□ 1.59
Ubb-201ENSMUST00000019649 Pdcd11Q6NS46 1862 aaKnown RBP24.98■■□□□ 1.59
Ubb-201ENSMUST00000019649 Ncapd3Q6ZQK0 1506 aa24.98■■□□□ 1.59
Ubb-201ENSMUST00000019649 Plppr3Q7TPB0 716 aa24.97■■□□□ 1.59
Ubb-201ENSMUST00000019649 Gm32742A0A1B0GT42 1604 aa24.97■■□□□ 1.59
Ubb-201ENSMUST00000019649 Adcy10Q8C0T9 1614 aa24.97■■□□□ 1.59
Ubb-201ENSMUST00000019649 Cfap74Q3UY96 1578 aa24.95■■□□□ 1.59
Ubb-201ENSMUST00000019649 Caskin1Q6P9K8 1431 aa24.94■■□□□ 1.58
Ubb-201ENSMUST00000019649 OvosQ3UU35 1456 aa24.93■■□□□ 1.58
Ubb-201ENSMUST00000019649 Abcc3B2RX12 1523 aa24.93■■□□□ 1.58
Ubb-201ENSMUST00000019649 Kif14L0N7N1 1674 aaKnown RBP24.92■■□□□ 1.58
Ubb-201ENSMUST00000019649 Kdm6bQ5NCY0 1641 aa24.9■■□□□ 1.58
Ubb-201ENSMUST00000019649 Kdm5cP41230 1554 aa24.9■■□□□ 1.58
Ubb-201ENSMUST00000019649 Tdrd9Q14BI7 1383 aa24.9■■□□□ 1.58
Ubb-201ENSMUST00000019649 Ccnb3Q810T2 1396 aa24.9■■□□□ 1.58
Ubb-201ENSMUST00000019649 Trappc8E9PWG2 1437 aa24.89■■□□□ 1.57
Ubb-201ENSMUST00000019649 Lemd3Q9WU40 921 aa24.89■■□□□ 1.57
Ubb-201ENSMUST00000019649 Qser1A2BIE1 1698 aa24.88■■□□□ 1.57
Ubb-201ENSMUST00000019649 Cul9Q80TT8 1865 aa24.87■■□□□ 1.57
Ubb-201ENSMUST00000019649 Naip2Q9QUK4 1447 aa24.87■■□□□ 1.57
Ubb-201ENSMUST00000019649 Arhgef40Q3UPH7 1517 aa24.86■■□□□ 1.57
Ubb-201ENSMUST00000019649 Dip2cE9PWR4 1557 aa24.81■■□□□ 1.56
Ubb-201ENSMUST00000019649 RereQ80TZ9 1558 aa24.81■■□□□ 1.56
Ubb-201ENSMUST00000019649 Atp10aO54827 1508 aa24.8■■□□□ 1.56
Ubb-201ENSMUST00000019649 Ptch1Q61115 1434 aa24.8■■□□□ 1.56
Ubb-201ENSMUST00000019649 Zmym4A2A791 1549 aaKnown RBP24.77■■□□□ 1.56
Ubb-201ENSMUST00000019649 Yeats2Q3TUF7 1407 aa24.77■■□□□ 1.56
Ubb-201ENSMUST00000019649 Hecw1Q8K4P8 1604 aa24.76■■□□□ 1.55
Ubb-201ENSMUST00000019649 Adamtsl3G3UXC7 1706 aa24.76■■□□□ 1.55
Ubb-201ENSMUST00000019649 Cdc42bpbQ7TT50 1713 aa24.75■■□□□ 1.55
Ubb-201ENSMUST00000019649 Cdk11bP24788 784 aaKnown RBP24.74■■□□□ 1.55
Ubb-201ENSMUST00000019649 MlecQ6ZQI3 291 aaKnown RBP24.73■■□□□ 1.55
Ubb-201ENSMUST00000019649 NpatQ8BMA5 1420 aa24.72■■□□□ 1.55
Ubb-201ENSMUST00000019649 Sart1Q9Z315 806 aaKnown RBP24.71■■□□□ 1.55
Ubb-201ENSMUST00000019649 Camsap2Q8C1B1 1461 aa24.63■■□□□ 1.53
Ubb-201ENSMUST00000019649 Brwd3A2AHJ4 1799 aa24.63■■□□□ 1.53
Ubb-201ENSMUST00000019649 Cdc42bpgQ80UW5 1551 aa24.62■■□□□ 1.53
Ubb-201ENSMUST00000019649 Neurl4Q5NCX5 1563 aa24.6■■□□□ 1.53
Ubb-201ENSMUST00000019649 Trpm1Q2TV84 1622 aa24.59■■□□□ 1.53
Ubb-201ENSMUST00000019649 Mast1Q9R1L5 1570 aa24.58■■□□□ 1.53
Ubb-201ENSMUST00000019649 Cfap65Q3V0B4 1847 aa24.58■■□□□ 1.53
Ubb-201ENSMUST00000019649 Fhod3Q76LL6 1578 aa24.58■■□□□ 1.52
Ubb-201ENSMUST00000019649 Nos1Q9Z0J4 1429 aa24.56■■□□□ 1.52
Ubb-201ENSMUST00000019649 Abcc5Q9R1X5 1436 aa24.56■■□□□ 1.52
Ubb-201ENSMUST00000019649 SphkapQ6NSW3 1687 aa24.55■■□□□ 1.52
Ubb-201ENSMUST00000019649 Plekhh2Q8C115 1491 aa24.53■■□□□ 1.52
Ubb-201ENSMUST00000019649 Map3k5O35099 1380 aa24.53■■□□□ 1.52
Ubb-201ENSMUST00000019649 Mtus2Q3UHD3 1353 aa24.53■■□□□ 1.52
Ubb-201ENSMUST00000019649 3425401B19RikD3Z1D3 1412 aa24.53■■□□□ 1.52
Ubb-201ENSMUST00000019649 Fmn2Q9JL04 1578 aa24.52■■□□□ 1.52
Ubb-201ENSMUST00000019649 Xrn1P97789 1719 aaKnown RBP24.51■■□□□ 1.51
Ubb-201ENSMUST00000019649 Supt6hQ62383 1726 aaKnown RBP24.48■■□□□ 1.51
Ubb-201ENSMUST00000019649 Dennd4bQ3U1Y4 1499 aa24.47■■□□□ 1.51
Ubb-201ENSMUST00000019649 Talpid3E9PV87 1520 aa24.46■■□□□ 1.51
Ubb-201ENSMUST00000019649 Gli2Q0VGT2 1544 aa24.46■■□□□ 1.51
Ubb-201ENSMUST00000019649 Prdm16A2A935 1275 aa24.46■■□□□ 1.51
Ubb-201ENSMUST00000019649 Znf518aB2RRF6 1478 aaKnown RBP24.44■■□□□ 1.5
Ubb-201ENSMUST00000019649 PtprmP28828 1452 aa24.44■■□□□ 1.5
Ubb-201ENSMUST00000019649 Safb2Q80YR5 991 aaKnown RBP24.44■■□□□ 1.5
Ubb-201ENSMUST00000019649 Naip6Q9JIB6 1403 aa24.42■■□□□ 1.5
Ubb-201ENSMUST00000019649 Rrp7aQ9D1C9 280 aaKnown RBP24.41■■□□□ 1.5
Ubb-201ENSMUST00000019649 Abca17E9PX95 1733 aa24.41■■□□□ 1.5
Ubb-201ENSMUST00000019649 Adgrl2Q8JZZ7 1487 aa24.4■■□□□ 1.5
Ubb-201ENSMUST00000019649 Abca6Q8K441 1624 aa24.4■■□□□ 1.5
Ubb-201ENSMUST00000019649 Il16O54824 1322 aa24.39■■□□□ 1.49
Ubb-201ENSMUST00000019649 Myom2Q14BI5 1463 aa24.38■■□□□ 1.49
Ubb-201ENSMUST00000019649 Plch2A2AP18 1501 aa24.38■■□□□ 1.49
Ubb-201ENSMUST00000019649 Uggt2E9Q4X2 1504 aa24.38■■□□□ 1.49
Ubb-201ENSMUST00000019649 Cabp1Q9JLK7 227 aa24.36■■□□□ 1.49
Ubb-201ENSMUST00000019649 Topbp1Q6ZQF0 1515 aa24.36■■□□□ 1.49
Ubb-201ENSMUST00000019649 Kdm3bQ6ZPY7 1562 aa24.35■■□□□ 1.49
Ubb-201ENSMUST00000019649 Cyb5rlB1AS42 316 aa24.35■■□□□ 1.49
Ubb-201ENSMUST00000019649 MyclP10166 368 aa24.34■■□□□ 1.49
Ubb-201ENSMUST00000019649 Adgrb2Q8CGM1 1561 aa24.33■■□□□ 1.49
Ubb-201ENSMUST00000019649 Afap1Q80YS6 731 aa24.32■■□□□ 1.48
Ubb-201ENSMUST00000019649 Trpm2Q91YD4 1506 aa24.32■■□□□ 1.48
Ubb-201ENSMUST00000019649 CltcQ68FD5 1675 aaKnown RBP24.29■■□□□ 1.48
Ubb-201ENSMUST00000019649 RictorQ6QI06 1708 aa24.29■■□□□ 1.48
Ubb-201ENSMUST00000019649 Ahdc1Q6PAL7 1594 aaKnown RBP24.27■■□□□ 1.48
Ubb-201ENSMUST00000019649 Kif3bQ61771 747 aa24.27■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms