RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Hecw2Q6I6G8 1578 aa27.6■■■□□ 2.01
Trim54-201ENSMUST00000013771 Synj2Q9D2G5 1434 aa27.59■■■□□ 2.01
Trim54-201ENSMUST00000013771 Abca9Q8K449 1623 aa27.55■■■□□ 2
Trim54-201ENSMUST00000013771 Setd5Q5XJV7 1441 aa27.53■■■□□ 2
Trim54-201ENSMUST00000013771 Fam163aQ8CAA5 168 aa27.53■■■□□ 2
Trim54-201ENSMUST00000013771 Kif14L0N7N1 1674 aaKnown RBP27.52■■■□□ 2
Trim54-201ENSMUST00000013771 Ercc6l2Q9JIM3 1537 aa27.51■■■□□ 2
Trim54-201ENSMUST00000013771 Ncoa3O09000 1398 aa27.51■■□□□ 1.99
Trim54-201ENSMUST00000013771 Qser1A2BIE1 1698 aa27.49■■□□□ 1.99
Trim54-201ENSMUST00000013771 Kiaa0556Q8C753 1610 aa27.48■■□□□ 1.99
Trim54-201ENSMUST00000013771 Lmo7E9PYF4 1699 aaKnown RBP27.48■■□□□ 1.99
Trim54-201ENSMUST00000013771 Dhx57Q6P5D3 1388 aaKnown RBP27.48■■□□□ 1.99
Trim54-201ENSMUST00000013771 Erich3F6QRE9 1637 aa27.47■■□□□ 1.99
Trim54-201ENSMUST00000013771 Ap3b1Q9Z1T1 1105 aa27.47■■□□□ 1.99
Trim54-201ENSMUST00000013771 Fam208aQ69ZR9 1610 aaKnown RBP27.45■■□□□ 1.98
Trim54-201ENSMUST00000013771 Mug1P28665 1476 aa27.43■■□□□ 1.98
Trim54-201ENSMUST00000013771 Pcf11G3X9Z4 1553 aa27.42■■□□□ 1.98
Trim54-201ENSMUST00000013771 Ncapd3Q6ZQK0 1506 aa27.4■■□□□ 1.98
Trim54-201ENSMUST00000013771 Kiaa1551Q5DTW7 1521 aa27.36■■□□□ 1.97
Trim54-201ENSMUST00000013771 Eea1Q8BL66 1411 aa27.36■■□□□ 1.97
Trim54-201ENSMUST00000013771 Adamtsl3G3UXC7 1706 aa27.35■■□□□ 1.97
Trim54-201ENSMUST00000013771 Cdc42bpaQ3UU96 1719 aa27.35■■□□□ 1.97
Trim54-201ENSMUST00000013771 Arhgap5P97393 1501 aa27.34■■□□□ 1.97
Trim54-201ENSMUST00000013771 PtprmP28828 1452 aa27.34■■□□□ 1.97
Trim54-201ENSMUST00000013771 OvosQ3UU35 1456 aa27.34■■□□□ 1.97
Trim54-201ENSMUST00000013771 Lemd3Q9WU40 921 aa27.33■■□□□ 1.97
Trim54-201ENSMUST00000013771 Camsap2Q8C1B1 1461 aa27.33■■□□□ 1.97
Trim54-201ENSMUST00000013771 Neurl4Q5NCX5 1563 aa27.32■■□□□ 1.96
Trim54-201ENSMUST00000013771 MyclP10166 368 aa27.31■■□□□ 1.96
Trim54-201ENSMUST00000013771 Yeats2Q3TUF7 1407 aa27.29■■□□□ 1.96
Trim54-201ENSMUST00000013771 NpatQ8BMA5 1420 aa27.29■■□□□ 1.96
Trim54-201ENSMUST00000013771 Atp10aO54827 1508 aa27.29■■□□□ 1.96
Trim54-201ENSMUST00000013771 Safb2Q80YR5 991 aaKnown RBP27.27■■□□□ 1.96
Trim54-201ENSMUST00000013771 Ptch1Q61115 1434 aa27.27■■□□□ 1.96
Trim54-201ENSMUST00000013771 Cul9Q80TT8 1865 aa27.25■■□□□ 1.95
Trim54-201ENSMUST00000013771 Dip2cE9PWR4 1557 aa27.21■■□□□ 1.95
Trim54-201ENSMUST00000013771 Kidins220E9Q9B7 1793 aa27.21■■□□□ 1.95
Trim54-201ENSMUST00000013771 Zmym4A2A791 1549 aaKnown RBP27.19■■□□□ 1.94
Trim54-201ENSMUST00000013771 Kdm5cP41230 1554 aa27.18■■□□□ 1.94
Trim54-201ENSMUST00000013771 CntlnA2AM05 1397 aa27.18■■□□□ 1.94
Trim54-201ENSMUST00000013771 RereQ80TZ9 1558 aa27.17■■□□□ 1.94
Trim54-201ENSMUST00000013771 Lmod2Q3UHZ5 550 aa27.16■■□□□ 1.94
Trim54-201ENSMUST00000013771 NexmifQ5DTT1 1515 aa27.11■■□□□ 1.93
Trim54-201ENSMUST00000013771 Supt6hQ62383 1726 aaKnown RBP27.11■■□□□ 1.93
Trim54-201ENSMUST00000013771 Gm1043A0A140LJC2 1431 aa27.1■■□□□ 1.93
Trim54-201ENSMUST00000013771 Trappc8E9PWG2 1437 aa27.1■■□□□ 1.93
Trim54-201ENSMUST00000013771 Ahdc1Q6PAL7 1594 aaKnown RBP27.1■■□□□ 1.93
Trim54-201ENSMUST00000013771 SphkapQ6NSW3 1687 aa27.06■■□□□ 1.92
Trim54-201ENSMUST00000013771 Tdrd9Q14BI7 1383 aa27.05■■□□□ 1.92
Trim54-201ENSMUST00000013771 Peg3Q3URU2 1571 aa27.04■■□□□ 1.92
Trim54-201ENSMUST00000013771 Cfap65Q3V0B4 1847 aa27.04■■□□□ 1.92
Trim54-201ENSMUST00000013771 Abcc3B2RX12 1523 aa27.03■■□□□ 1.92
Trim54-201ENSMUST00000013771 Cfap74Q3UY96 1578 aa27.03■■□□□ 1.92
Trim54-201ENSMUST00000013771 Gm32742A0A1B0GT42 1604 aa27.03■■□□□ 1.92
Trim54-201ENSMUST00000013771 Fbxo41Q6NS60 873 aa27.01■■□□□ 1.91
Trim54-201ENSMUST00000013771 Tiam1Q60610 1591 aa27.01■■□□□ 1.91
Trim54-201ENSMUST00000013771 Pdcd11Q6NS46 1862 aaKnown RBP27.01■■□□□ 1.91
Trim54-201ENSMUST00000013771 Dennd4bQ3U1Y4 1499 aa26.95■■□□□ 1.91
Trim54-201ENSMUST00000013771 Talpid3E9PV87 1520 aa26.95■■□□□ 1.9
Trim54-201ENSMUST00000013771 Sart1Q9Z315 806 aaKnown RBP26.93■■□□□ 1.9
Trim54-201ENSMUST00000013771 Caskin1Q6P9K8 1431 aa26.93■■□□□ 1.9
Trim54-201ENSMUST00000013771 Adcy10Q8C0T9 1614 aa26.92■■□□□ 1.9
Trim54-201ENSMUST00000013771 Hecw1Q8K4P8 1604 aa26.91■■□□□ 1.9
Trim54-201ENSMUST00000013771 Abca6Q8K441 1624 aa26.9■■□□□ 1.9
Trim54-201ENSMUST00000013771 Naip1Q9QWK5 1403 aa26.89■■□□□ 1.9
Trim54-201ENSMUST00000013771 Myom2Q14BI5 1463 aa26.88■■□□□ 1.89
Trim54-201ENSMUST00000013771 Afap1Q80YS6 731 aa26.86■■□□□ 1.89
Trim54-201ENSMUST00000013771 Cdc42bpbQ7TT50 1713 aa26.84■■□□□ 1.89
Trim54-201ENSMUST00000013771 4930407I10RikD3Z5T8 1512 aa26.83■■□□□ 1.89
Trim54-201ENSMUST00000013771 Cdc42bpgQ80UW5 1551 aa26.82■■□□□ 1.88
Trim54-201ENSMUST00000013771 Arhgef40Q3UPH7 1517 aa26.82■■□□□ 1.88
Trim54-201ENSMUST00000013771 Scn4aQ9ER60 1841 aa26.8■■□□□ 1.88
Trim54-201ENSMUST00000013771 Trpm1Q2TV84 1622 aa26.8■■□□□ 1.88
Trim54-201ENSMUST00000013771 Ccnb3Q810T2 1396 aa26.79■■□□□ 1.88
Trim54-201ENSMUST00000013771 Map3k5O35099 1380 aa26.78■■□□□ 1.88
Trim54-201ENSMUST00000013771 Cdk11bP24788 784 aaKnown RBP26.75■■□□□ 1.87
Trim54-201ENSMUST00000013771 Lmtk2Q3TYD6 1471 aa26.74■■□□□ 1.87
Trim54-201ENSMUST00000013771 Dip2aQ8BWT5 1523 aa26.74■■□□□ 1.87
Trim54-201ENSMUST00000013771 Dip2bQ3UH60 1574 aa26.74■■□□□ 1.87
Trim54-201ENSMUST00000013771 Topaz1E5FYH1 1653 aa26.74■■□□□ 1.87
Trim54-201ENSMUST00000013771 Fhod3Q76LL6 1578 aa26.72■■□□□ 1.87
Trim54-201ENSMUST00000013771 Gli2Q0VGT2 1544 aa26.71■■□□□ 1.87
Trim54-201ENSMUST00000013771 Trpm2Q91YD4 1506 aa26.71■■□□□ 1.87
Trim54-201ENSMUST00000013771 Nos1Q9Z0J4 1429 aa26.7■■□□□ 1.86
Trim54-201ENSMUST00000013771 Naip6Q9JIB6 1403 aa26.67■■□□□ 1.86
Trim54-201ENSMUST00000013771 Pip4k2bQ80XI4 416 aa26.66■■□□□ 1.86
Trim54-201ENSMUST00000013771 CltcQ68FD5 1675 aaKnown RBP26.64■■□□□ 1.86
Trim54-201ENSMUST00000013771 RictorQ6QI06 1708 aa26.57■■□□□ 1.84
Trim54-201ENSMUST00000013771 Bcl9Q9D219 1425 aa26.57■■□□□ 1.84
Trim54-201ENSMUST00000013771 Znf518aB2RRF6 1478 aaKnown RBP26.57■■□□□ 1.84
Trim54-201ENSMUST00000013771 Xrn1P97789 1719 aaKnown RBP26.57■■□□□ 1.84
Trim54-201ENSMUST00000013771 Rrp7aQ9D1C9 280 aaKnown RBP26.56■■□□□ 1.84
Trim54-201ENSMUST00000013771 Knl1Q66JQ7 1612 aa26.56■■□□□ 1.84
Trim54-201ENSMUST00000013771 Fmn2Q9JL04 1578 aa26.54■■□□□ 1.84
Trim54-201ENSMUST00000013771 Rsph4aQ8BYM7 716 aa26.53■■□□□ 1.84
Trim54-201ENSMUST00000013771 Prdm16A2A935 1275 aa26.52■■□□□ 1.84
Trim54-201ENSMUST00000013771 Ecm2Q5FW85 670 aa26.52■■□□□ 1.84
Trim54-201ENSMUST00000013771 Kif3bQ61771 747 aa26.52■■□□□ 1.84
Trim54-201ENSMUST00000013771 Gm13697A2AK42 830 aa26.5■■□□□ 1.83
Trim54-201ENSMUST00000013771 Ltbp4Q8K4G1 1666 aa26.5■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms