RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	RPL8B	P29453	256 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	RAD16	P31244	790 aa		0.07	□□□□□ -2.4
snR45	snR45	AUA1	P32450	94 aa		0.07	□□□□□ -2.4
snR45	snR45	NIP1	P32497	812 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	CBF2	P32504	956 aa		0.07	□□□□□ -2.4
snR45	snR45	CYS4	P32582	507 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	YME1	P32795	747 aa		0.07	□□□□□ -2.4
snR45	snR45	PTK1	P36002	662 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	DID4	P36108	232 aa		0.07	□□□□□ -2.4
snR45	snR45	AAP1	P37898	856 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	PSY4	P38193	441 aa		0.07	□□□□□ -2.4
snR45	snR45	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.07	□□□□□ -2.4	not detected
snR45	snR45	MUM2	P38236	366 aa		0.07	□□□□□ -2.4
snR45	snR45	YGP1	P38616	354 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	SIP3	P38717	1229 aa		0.07	□□□□□ -2.4
snR45	snR45	YNG2	P38806	282 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	FAD1	P38913	306 aa		0.07	□□□□□ -2.4
snR45	snR45	YDR089W	P38966	869 aa		0.07	□□□□□ -2.4
snR45	snR45	STT3	P39007	718 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	ELO1	P39540	310 aa		0.07	□□□□□ -2.4
snR45	snR45	YEL057C	P39983	233 aa		0.07	□□□□□ -2.4
snR45	snR45	EAF5	P39995	279 aa		0.07	□□□□□ -2.4
snR45	snR45	NUG1	P40010	520 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	SER33	P40510	469 aa		0.07	□□□□□ -2.4
snR45	snR45	AGE2	P40529	298 aa		0.07	□□□□□ -2.4
snR45	snR45	YIL012W	P40551	113 aa		0.07	□□□□□ -2.4
snR45	snR45	RPS29A	P41057	56 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	ALK1	P43633	760 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	RPC17	P47076	161 aa		0.07	□□□□□ -2.4
snR45	snR45	ASK10	P48361	1146 aa		0.07	□□□□□ -2.4
snR45	snR45	VEL1	P53058	206 aa		0.07	□□□□□ -2.4
snR45	snR45	DSD1	P53095	428 aa		0.07	□□□□□ -2.4
snR45	snR45	FLC3	P53121	802 aa		0.07	□□□□□ -2.4
snR45	snR45	RPN14	P53196	417 aa		0.07	□□□□□ -2.4
snR45	snR45	COG2	P53271	262 aa		0.07	□□□□□ -2.4
snR45	snR45	CWC22	P53333	577 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	MKC7	P53379	596 aa		0.07	□□□□□ -2.4
snR45	snR45	HST1	P53685	503 aa		0.07	□□□□□ -2.4
snR45	snR45	WSC2	P53832	503 aa		0.07	□□□□□ -2.4
snR45	snR45	YNL181W	P53878	407 aa		0.07	□□□□□ -2.4
snR45	snR45	IBD2	P53892	351 aa		0.07	□□□□□ -2.4
snR45	snR45	VAC7	P53950	1165 aa		0.07	□□□□□ -2.4
snR45	snR45	YNL040W	P53960	456 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	UBX4	P54730	416 aa		0.07	□□□□□ -2.4
snR45	snR45	ADA2	Q02336	434 aa		0.07	□□□□□ -2.4
snR45	snR45	YPL077C	Q02831	240 aa		0.07	□□□□□ -2.4
snR45	snR45	PRP3	Q03338	469 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	HER2	Q03557	464 aa		0.07	□□□□□ -2.4
snR45	snR45	FMN1	Q03778	218 aa		0.07	□□□□□ -2.4
snR45	snR45	VPS64	Q03944	604 aa		0.07	□□□□□ -2.4
snR45	snR45	YET2	Q04210	160 aa		0.07	□□□□□ -2.4
snR45	snR45	API2	Q04413	109 aa		0.07	□□□□□ -2.4
snR45	snR45	POB3	Q04636	552 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	RSF1	Q05043	376 aa		0.07	□□□□□ -2.4
snR45	snR45	MDM30	Q05930	598 aa		0.07	□□□□□ -2.4
snR45	snR45	DIC1	Q06143	298 aa		0.07	□□□□□ -2.4
snR45	snR45	ARR3	Q06598	404 aa		0.07	□□□□□ -2.4
snR45	snR45	OPY2	Q06810	360 aa		0.07	□□□□□ -2.4
snR45	snR45	YDL057W	Q07379	328 aa		0.07	□□□□□ -2.4
snR45	snR45	DNL4	Q08387	944 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	LEA1	Q08963	238 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	KEL3	Q08979	651 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	SAM4	Q08985	325 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	SGT2	Q12118	346 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	BAG7	Q12128	409 aa		0.07	□□□□□ -2.4
snR45	snR45	ATO3	Q12359	275 aa		0.07	□□□□□ -2.4
snR45	snR45	WTM1	Q12363	437 aa	Known RBP	0.07	□□□□□ -2.4
snR45	snR45	SNU66	Q12420	587 aa	Predicted RBP	0.07	□□□□□ -2.4
snR45	snR45	YOL098C	Q12496	1037 aa		0.07	□□□□□ -2.4
snR45	snR45	YGR035W-A	Q45U48	73 aa		0.07	□□□□□ -2.4
snR45	snR45	APM4	Q99186	491 aa		0.07	□□□□□ -2.4
snR45	snR45	TY1B-A	O13527	1196 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	COX1	P00401	534 aa		0.06	□□□□□ -2.4
snR45	snR45	SES1	P07284	462 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	HOM3	P10869	527 aa		0.06	□□□□□ -2.4
snR45	snR45	SPO7	P18410	259 aa		0.06	□□□□□ -2.4
snR45	snR45	GLN3	P18494	730 aa		0.06	□□□□□ -2.4
snR45	snR45	SPE2	P21182	396 aa		0.06	□□□□□ -2.4
snR45	snR45	SCL1	P21243	252 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	RPI1	P23250	407 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	YCK1	P23291	538 aa		0.06	□□□□□ -2.4
snR45	snR45	PPH21	P23594	369 aa		0.06	□□□□□ -2.4
snR45	snR45	PRE8	P23639	250 aa		0.06	□□□□□ -2.4
snR45	snR45	RRP43	P25359	394 aa	Predicted RBP	0.06	□□□□□ -2.4
snR45	snR45	MXR2	P25566	168 aa		0.06	□□□□□ -2.4
snR45	snR45	ARE1	P25628	610 aa		0.06	□□□□□ -2.4
snR45	snR45	MIG1	P27705	504 aa		0.06	□□□□□ -2.4
snR45	snR45	PRE2	P30656	287 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	YKL187C	P34231	750 aa		0.06	□□□□□ -2.4
snR45	snR45	MTC2	P34246	357 aa		0.06	□□□□□ -2.4
snR45	snR45	YNK1	P36010	153 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	MUD2	P36084	527 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	PRY2	P36110	329 aa		0.06	□□□□□ -2.4
snR45	snR45	YBR056W	P38081	501 aa		0.06	□□□□□ -2.4
snR45	snR45	FIG1	P38224	298 aa		0.06	□□□□□ -2.4
snR45	snR45	RXT2	P38255	430 aa		0.06	□□□□□ -2.4
snR45	snR45	SIF2	P38262	535 aa		0.06	□□□□□ -2.4
snR45	snR45	ATG12	P38316	186 aa		0.06	□□□□□ -2.4
snR45	snR45	OSH3	P38713	996 aa	Known RBP	0.06	□□□□□ -2.4
snR45	snR45	ECM34	P38728	170 aa		0.06	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms