RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	XBP1	P40489	647 aa		3.13	□□□□□ -1.91
snR35	snR35	NET1	P47035	1189 aa		3.13	□□□□□ -1.91
snR35	snR35	URB2	P47108	1174 aa		3.13	□□□□□ -1.91
snR35	snR35	FMS1	P50264	508 aa		3.13	□□□□□ -1.91
snR35	snR35	YNL234W	P53857	426 aa		3.13	□□□□□ -1.91
snR35	snR35	BNI5	P53890	448 aa	Known RBP	3.13	□□□□□ -1.91
snR35	snR35	RPL15B	P54780	204 aa	Predicted RBP	3.13	□□□□□ -1.91
snR35	snR35	RHO4	Q00246	291 aa		3.13	□□□□□ -1.91
snR35	snR35	RCF1	Q03713	159 aa		3.13	□□□□□ -1.91
snR35	snR35	ARX1	Q03862	593 aa	Known RBP	3.13	□□□□□ -1.91
snR35	snR35	MRPL1	Q04599	285 aa		3.13	□□□□□ -1.91
snR35	snR35	SOV1	Q04748	898 aa		3.13	□□□□□ -1.91
snR35	snR35	ROY1	Q04847	553 aa		3.13	□□□□□ -1.91
snR35	snR35	RSF1	Q05043	376 aa		3.13	□□□□□ -1.91
snR35	snR35	DON1	Q05610	365 aa		3.13	□□□□□ -1.91
snR35	snR35	YDL057W	Q07379	328 aa		3.13	□□□□□ -1.91
snR35	snR35	GSH2	Q08220	491 aa		3.13	□□□□□ -1.91
snR35	snR35	YLR112W	Q12130	139 aa		3.13	□□□□□ -1.91
snR35	snR35	ARP6	Q12509	438 aa		3.13	□□□□□ -1.91
snR35	snR35	ISN1	Q99312	450 aa		3.13	□□□□□ -1.91
snR35	snR35	YPR089W	O13585	888 aa		3.12	□□□□□ -1.91
snR35	snR35	GPH1	P06738	902 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
snR35	snR35	CPR2	P23285	205 aa		3.12	□□□□□ -1.91
snR35	snR35	SPB1	P25582	841 aa	Predicted RBP	3.12	□□□□□ -1.91
snR35	snR35	ECM32	P32644	1121 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	GYP6	P32806	458 aa		3.12	□□□□□ -1.91
snR35	snR35	YME2	P32843	850 aa		3.12	□□□□□ -1.91
snR35	snR35	DUG2	P38149	878 aa		3.12	□□□□□ -1.91
snR35	snR35	BNA4	P38169	460 aa		3.12	□□□□□ -1.91
snR35	snR35	TCM62	P38228	572 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	TIF4631	P39935	952 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	PCI8	P40512	444 aa		3.12	□□□□□ -1.91
snR35	snR35	RTS2	P40962	232 aa		3.12	□□□□□ -1.91
snR35	snR35	VMA13	P41807	478 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
snR35	snR35	YGL108C	P53139	140 aa		3.12	□□□□□ -1.91
snR35	snR35	NUP100	Q02629	959 aa		3.12	□□□□□ -1.91
snR35	snR35	EKI1	Q03764	534 aa		3.12	□□□□□ -1.91
snR35	snR35	RRP45	Q05636	305 aa	Known RBP	3.12	□□□□□ -1.91
snR35	snR35	AFI1	Q99222	893 aa		3.12	□□□□□ -1.91
snR35	snR35	SUC2	P00724	532 aa		3.11	□□□□□ -1.91
snR35	snR35	YPT1	P01123	206 aa	Known RBP	3.11	□□□□□ -1.91
snR35	snR35	APE1	P14904	514 aa		3.11	□□□□□ -1.91
snR35	snR35	MDM10	P18409	493 aa		3.11	□□□□□ -1.91
snR35	snR35	TYR1	P20049	452 aa		3.11	□□□□□ -1.91
snR35	snR35	PTP1	P25044	335 aa		3.11	□□□□□ -1.91
snR35	snR35	TFB1	P32776	642 aa		3.11	□□□□□ -1.91
snR35	snR35	NIP100	P33420	868 aa		3.11	□□□□□ -1.91
snR35	snR35	PHD1	P36093	366 aa		3.11	□□□□□ -1.91
snR35	snR35	SPC34	P36131	295 aa		3.11	□□□□□ -1.91
snR35	snR35	NTC20	P38302	140 aa	Predicted RBP	3.11	□□□□□ -1.91
snR35	snR35	FLO5	P38894	1075 aa		3.11	□□□□□ -1.91
snR35	snR35	CAK1	P43568	368 aa	Predicted RBP	3.11	□□□□□ -1.91
snR35	snR35	MDV1	P47025	714 aa		3.11	□□□□□ -1.91
snR35	snR35	YGR149W	P48236	432 aa		3.11	□□□□□ -1.91
snR35	snR35	OCA1	P50946	238 aa	Predicted RBP	3.11	□□□□□ -1.91
snR35	snR35	ART5	P53244	586 aa	Known RBP	3.11	□□□□□ -1.91
snR35	snR35	DRN1	P53255	507 aa	Known RBP	3.11	□□□□□ -1.91
snR35	snR35	MDG1	P53885	366 aa		3.11	□□□□□ -1.91
snR35	snR35	STP1	Q00947	519 aa		3.11	□□□□□ -1.91
snR35	snR35	SKO1	Q02100	647 aa		3.11	□□□□□ -1.91
snR35	snR35	YPL014W	Q02606	381 aa		3.11	□□□□□ -1.91
snR35	snR35	IZH1	Q03419	316 aa		3.11	□□□□□ -1.91
snR35	snR35	AIM32	Q04689	311 aa		3.11	□□□□□ -1.91
snR35	snR35	UBX3	Q12229	455 aa		3.11	□□□□□ -1.91
snR35	snR35	RAD52	P06778	471 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	PPH22	P23595	377 aa		3.1	□□□□□ -1.91
snR35	snR35	YCP4	P25349	247 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	YCR007C	P25354	239 aa		3.1	□□□□□ -1.91
snR35	snR35	MCM4	P30665	933 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	MGM1	P32266	881 aa		3.1	□□□□□ -1.91
snR35	snR35	AFG1	P32317	509 aa		3.1	□□□□□ -1.91
snR35	snR35	MSN2	P33748	704 aa		3.1	□□□□□ -1.91
snR35	snR35	APE3	P37302	537 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	ERG7	P38604	731 aa		3.1	□□□□□ -1.91
snR35	snR35	YTA12	P40341	825 aa		3.1	□□□□□ -1.91
snR35	snR35	JEM1	P40358	645 aa		3.1	□□□□□ -1.91
snR35	snR35	COS5	P47187	383 aa		3.1	□□□□□ -1.91
snR35	snR35	TCB2	P48231	1178 aa		3.1	□□□□□ -1.91
snR35	snR35	YGL138C	P53122	345 aa		3.1	□□□□□ -1.91
snR35	snR35	RMD9	P53140	646 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	BUD32	P53323	261 aa		3.1	□□□□□ -1.91
snR35	snR35	LGE1	Q02796	332 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	YLR281C	Q05863	155 aa		3.1	□□□□□ -1.91
snR35	snR35	COS7	Q07788	383 aa		3.1	□□□□□ -1.91
snR35	snR35	APL5	Q08951	932 aa	Known RBP	3.1	□□□□□ -1.91
snR35	snR35	HER1	Q12276	1246 aa		3.1	□□□□□ -1.91
snR35	snR35	HSP42	Q12329	375 aa		3.1	□□□□□ -1.91
snR35	snR35	RPS2	P25443	254 aa	Known RBP	3.09	□□□□□ -1.91
snR35	snR35	YIM1	P28625	365 aa		3.09	□□□□□ -1.91
snR35	snR35	SWI3	P32591	825 aa		3.09	□□□□□ -1.91
snR35	snR35	REC114	P32841	428 aa		3.09	□□□□□ -1.91
snR35	snR35	PDR3	P33200	976 aa		3.09	□□□□□ -1.91
snR35	snR35	ASK1	P35734	292 aa		3.09	□□□□□ -1.91
snR35	snR35	MIC60	P36112	540 aa		3.09	□□□□□ -1.91
snR35	snR35	ARA1	P38115	344 aa		3.09	□□□□□ -1.91
snR35	snR35	CSM2	P40465	213 aa		3.09	□□□□□ -1.91
snR35	snR35	TFG2	P41896	400 aa	Predicted RBP	3.09	□□□□□ -1.91
snR35	snR35	ZIM17	P42844	174 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms