RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	NGL3	Q03210	505 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	ATG16	Q03818	150 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	ARX1	Q03862	593 aa	Known RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	THI7	Q05998	598 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	CDA2	Q06703	312 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	OPY2	Q06810	360 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	BUD7	Q08754	746 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	SEM1	O94742	89 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	YSP3	P25036	478 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	CTF13	P35203	478 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	BLI1	P35727	113 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	PHO11	P35842	467 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	PHO12	P38693	467 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	DIA4	P38705	446 aa	Predicted RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	RGI2	P40188	164 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	CHA4	P43634	648 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	SSY5	P47002	699 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	SAP4	P53036	818 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	YGR021W	P53212	290 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	PBP1	P53297	722 aa	Known RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	RHO3	Q00245	231 aa	Known RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	RLI1	Q03195	608 aa	Known RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	ROT1	Q03691	256 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	TRS23	Q03784	219 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	RSM24	Q03976	319 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	MUS81	Q04149	632 aa	Predicted RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	RRN11	Q04712	507 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	RSF1	Q05043	376 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	RGC1	Q06108	1083 aa	Known RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	YPS7	Q06325	596 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	YLR030W	Q07967	263 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	NRT1	Q08485	598 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	YPL272C	Q08984	517 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	SMF3	Q12078	473 aa	Predicted RBP	2.38	□□□□□ -2.03
VTC3	YPL019C	AI5_ALPHA	Q9ZZX1	630 aa		2.38	□□□□□ -2.03
VTC3	YPL019C	MSS18	P08593	268 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	KIN2	P13186	1147 aa	Known RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	ENA1	P13587	1091 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	PMS1	P14242	873 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
VTC3	YPL019C	CLN1	P20437	546 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	SLY1	P22213	666 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	YCR015C	P25616	317 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	MVD1	P32377	396 aa	Known RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	YPT7	P32939	208 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	NTR2	P36118	322 aa	Predicted RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	HIS2	P38635	335 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	YHR033W	P38690	423 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	PCL5	P38794	229 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	LYS1	P38998	373 aa	RIP-Chip data	2.37	□□□□□ -2.03	not detected
VTC3	YPL019C	TIM17	P39515	158 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	GID8	P40208	455 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	SHR5	P41912	237 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	YJL107C	P42947	387 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	MET12	P46151	657 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	UBX6	P47049	396 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	EFM6	P53970	246 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ENA2	Q01896	1091 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
VTC3	YPL019C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
VTC3	YPL019C	RMP1	Q12530	201 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ENA5	Q12691	1091 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	RRP12	Q12754	1228 aa	Known RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	HOP1	P20050	605 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	RPN12	P32496	274 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	SKN1	P33336	771 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	PRP18	P33411	251 aa	Predicted RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	LRG1	P35688	1017 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	FLC2	P39719	783 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	YAT2	P40017	923 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ARG2	P40360	574 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	TES1	P41903	349 aa	Known RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	PFA3	P42836	336 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ZRG17	P53735	605 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	FRE4	P53746	719 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	MOT3	P54785	490 aa	Known RBP	2.37	□□□□□ -2.03
VTC3	YPL019C	YDR132C	Q03900	495 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	RCO1	Q04779	684 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	ENT2	Q05785	613 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	DIN7	Q12086	430 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	TMS1	Q12116	473 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	YLL056C	Q12177	298 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	HSP42	Q12329	375 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	LAS17	Q12446	633 aa		2.37	□□□□□ -2.03
VTC3	YPL019C	SEC62	P21825	274 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	YSR3	P23501	404 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	YCR006C	P25350	157 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	IMP3	P32899	183 aa	Predicted RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	NIC96	P34077	839 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	STB6	P36085	766 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	MAK5	P38112	773 aa	Predicted RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	TRM7	P38238	310 aa	Known RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	YMR124W	P39523	943 aa	Known RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	LSM5	P40089	93 aa	Known RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	LRO1	P40345	661 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	IME4	P41833	600 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	GTF1	P53260	183 aa	Predicted RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	ARE2	P53629	642 aa	Known RBP	2.36	□□□□□ -2.03
VTC3	YPL019C	ASI2	P53895	289 aa		2.36	□□□□□ -2.03
VTC3	YPL019C	NOP15	P53927	220 aa	Predicted RBP	2.36	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 139.8 ms