RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	FPS1	P23900	669 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	LHP1	P33399	275 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	SEF1	P34228	1148 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	NOP4	P37838	685 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	RSC30	P38781	883 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	STT3	P39007	718 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	DUN1	P39009	513 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	ECM10	P39987	644 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RPN3	P40016	523 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	NDE1	P40215	560 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	ICE2	P40499	491 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	YIR035C	P40579	254 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	MNN5	P46982	586 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	JHD2	P47156	728 aa	Predicted RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	SPT20	P50875	604 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	ERV14	P53173	138 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RIM8	P53179	542 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	OCA2	P53949	197 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	RNY1	Q02933	434 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	NGL2	Q03264	515 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	PML39	Q03760	334 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	MYO5	Q04439	1219 aa	Known RBP	7.03	□□□□□ -1.28
MSB3	YNL293W	YLR345W	Q06137	509 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	CDA2	Q06703	312 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	YOL019W	Q08157	551 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	UAF30	Q08747	228 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	BMT6	Q12291	365 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	SAS5	Q99314	248 aa		7.03	□□□□□ -1.28
MSB3	YNL293W	COB	P00163	385 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	AI2	P03876	854 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	PHO4	P07270	312 aa	Known RBP	7.02	□□□□□ -1.29
MSB3	YNL293W	PRP2	P20095	876 aa	Predicted RBP	7.02	□□□□□ -1.29
MSB3	YNL293W	CTR86	P25355	563 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	RSA4	P25382	515 aa	Known RBP	7.02	□□□□□ -1.29
MSB3	YNL293W	GUT2	P32191	649 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	UTR4	P32626	227 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	GLC3	P32775	704 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	PTM1	P32857	523 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	SIP2	P34164	415 aa	Known RBP	7.02	□□□□□ -1.29
MSB3	YNL293W	KRE29	P40026	464 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	MMF1	P40185	145 aa	Known RBP	7.02	□□□□□ -1.29
MSB3	YNL293W	RGI2	P40188	164 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	MAD2	P40958	196 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	RTT101	P47050	842 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	YGR021W	P53212	290 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	RCO1	Q04779	684 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	BOP2	Q06150	570 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	SLD7	Q08457	257 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	FYV7	Q12247	151 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	SVS1	Q12254	260 aa		7.02	□□□□□ -1.29
MSB3	YNL293W	RPS24A	P0CX31	135 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	RPS24B	P0CX32	135 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	ZWF1	P11412	505 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	RPL3	P14126	387 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	BEM3	P32873	1128 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	TRM2	P33753	639 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	HMT1	P38074	348 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	APN2	P38207	520 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	ERV46	P39727	415 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	ARF3	P40994	183 aa	RIP-Chip data	7.01	□□□□□ -1.29	not detected
MSB3	YNL293W	YDL183C	P48569	320 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	LYS20	P48570	428 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	MRK1	P50873	501 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	YGR012W	P53206	393 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	VOA1	P53262	265 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	PEX13	P80667	386 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	MTG1	Q03151	367 aa	Predicted RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	SPC19	Q03954	165 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	DCR2	Q05924	578 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	GET3	Q12154	354 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	NCB2	Q92317	146 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	YFR010W-A	P0C5N0	62 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	IMA3	P0CW40	589 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	IMA4	P0CW41	589 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	SAN1	P22470	610 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	CPR4	P25334	318 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	CHA1	P25379	360 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	DPH2	P32461	534 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	GSP1	P32835	219 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	GSP2	P32836	220 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	SER1	P33330	395 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	OAR1	P35731	278 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	ECM13	P38195	257 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	COS8	P38723	381 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	UBA4	P38820	440 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	IDP2	P41939	412 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	YJR030C	P47101	745 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	RPS12	P48589	143 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	NOG2	P53742	486 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	YCL001W-A	P87012	153 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	NAN1	Q02931	896 aa	Known RBP	7.01	□□□□□ -1.29
MSB3	YNL293W	YMR187C	Q03236	431 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	OST6	Q03723	332 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	SIZ1	Q04195	904 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	GIS4	Q04233	774 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	IMA2	Q08295	589 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	YPL272C	Q08984	517 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	MPD2	Q99316	277 aa		7.01	□□□□□ -1.29
MSB3	YNL293W	CDC28	P00546	298 aa	Known RBP	7	□□□□□ -1.29
MSB3	YNL293W	RHO1	P06780	209 aa	Known RBP	7	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms