RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YLR413WQ06689 675 aa12.07□□□□□ -0.48
BDF1YLR399C YLL058WQ12198 575 aa12.07□□□□□ -0.48
BDF1YLR399C STE3P06783 470 aa12.07□□□□□ -0.48
BDF1YLR399C STE5P32917 917 aa12.07□□□□□ -0.48
BDF1YLR399C FRE2P36033 711 aa12.07□□□□□ -0.48
BDF1YLR399C MLH1P38920 769 aa12.07□□□□□ -0.48
BDF1YLR399C ARF3P40994 183 aaRIP-Chip data12.07□□□□□ -0.48not detected
BDF1YLR399C GYP8P43570 497 aa12.07□□□□□ -0.48
BDF1YLR399C BST1P43571 1029 aa12.07□□□□□ -0.48
BDF1YLR399C BUD13P46947 266 aaPredicted RBP12.07□□□□□ -0.48
BDF1YLR399C YML037CQ03703 340 aa12.07□□□□□ -0.48
BDF1YLR399C YOL019WQ08157 551 aa12.07□□□□□ -0.48
BDF1YLR399C YLR049CQ12110 428 aa12.07□□□□□ -0.48
BDF1YLR399C YOR022CQ12204 715 aa12.07□□□□□ -0.48
BDF1YLR399C YOR214CQ12282 236 aa12.07□□□□□ -0.48
BDF1YLR399C EFG1Q3E705 233 aaKnown RBP12.07□□□□□ -0.48
BDF1YLR399C YKL018C-AQ3E7A7 99 aa12.07□□□□□ -0.48
BDF1YLR399C MHF2Q3E829 80 aa12.07□□□□□ -0.48
BDF1YLR399C FUS1P11710 512 aa12.06□□□□□ -0.48
BDF1YLR399C JEN1P36035 616 aa12.06□□□□□ -0.48
BDF1YLR399C MMS4P38257 691 aa12.06□□□□□ -0.48
BDF1YLR399C GEM1P39722 662 aa12.06□□□□□ -0.48
BDF1YLR399C YER034WP40022 185 aaKnown RBP12.06□□□□□ -0.48
BDF1YLR399C HXT16P47185 567 aa12.06□□□□□ -0.48
BDF1YLR399C ALT1P52893 592 aa12.06□□□□□ -0.48
BDF1YLR399C GRS2Q06817 618 aa12.06□□□□□ -0.48
BDF1YLR399C GUD1Q07729 489 aa12.06□□□□□ -0.48
BDF1YLR399C TRE2Q08693 809 aa12.06□□□□□ -0.48
BDF1YLR399C TRX2P22803 104 aaKnown RBP12.06□□□□□ -0.48
BDF1YLR399C ECM31P38122 312 aa12.06□□□□□ -0.48
BDF1YLR399C YBR225WP38321 900 aa12.06□□□□□ -0.48
BDF1YLR399C YHR045WP38775 560 aa12.06□□□□□ -0.48
BDF1YLR399C YEL025CP39991 1188 aa12.06□□□□□ -0.48
BDF1YLR399C PCL6P40038 420 aa12.06□□□□□ -0.48
BDF1YLR399C UTP7P40055 554 aaKnown RBP12.06□□□□□ -0.48
BDF1YLR399C SOK1P40317 901 aa12.06□□□□□ -0.48
BDF1YLR399C PTR3P43606 678 aa12.06□□□□□ -0.48
BDF1YLR399C IPI3P53877 555 aa12.06□□□□□ -0.48
BDF1YLR399C YPL034WQ03083 165 aa12.06□□□□□ -0.48
BDF1YLR399C VTA1Q06263 330 aa12.06□□□□□ -0.48
BDF1YLR399C YNL018CP53976 612 aa12.05□□□□□ -0.48
BDF1YLR399C GCN5Q03330 439 aa12.05□□□□□ -0.48
BDF1YLR399C RIF2Q06208 395 aa12.05□□□□□ -0.48
BDF1YLR399C YLR126CQ12288 251 aa12.05□□□□□ -0.48
BDF1YLR399C HXT2P23585 541 aa12.04□□□□□ -0.48
BDF1YLR399C BEM1P29366 551 aa12.04□□□□□ -0.48
BDF1YLR399C TIR3P40552 269 aa12.04□□□□□ -0.48
BDF1YLR399C ROM1P53046 1155 aa12.04□□□□□ -0.48
BDF1YLR399C ARP4P80428 489 aa12.04□□□□□ -0.48
BDF1YLR399C YHC1Q05900 231 aaKnown RBP12.04□□□□□ -0.48
BDF1YLR399C RSC3Q06639 885 aa12.04□□□□□ -0.48
BDF1YLR399C FEX1Q08913 375 aa12.04□□□□□ -0.48
BDF1YLR399C NBP2Q12163 236 aa12.04□□□□□ -0.48
BDF1YLR399C CDC19P00549 500 aaKnown RBP12.04□□□□□ -0.48
BDF1YLR399C GAL3P13045 520 aa12.04□□□□□ -0.48
BDF1YLR399C SGF29P25554 259 aa12.04□□□□□ -0.48
BDF1YLR399C MCR1P36060 302 aaKnown RBP12.04□□□□□ -0.48
BDF1YLR399C RGI1P40043 161 aaPredicted RBP12.04□□□□□ -0.48
BDF1YLR399C YLR345WQ06137 509 aa12.04□□□□□ -0.48
BDF1YLR399C YPR027CQ12079 277 aa12.04□□□□□ -0.48
BDF1YLR399C SDH2P21801 266 aa12.03□□□□□ -0.48
BDF1YLR399C SGV1P23293 657 aaKnown RBP12.03□□□□□ -0.48
BDF1YLR399C DBP2P24783 546 aaKnown RBP12.03□□□□□ -0.48
BDF1YLR399C SAT4P25333 603 aaKnown RBP12.03□□□□□ -0.48
BDF1YLR399C PTM1P32857 523 aa12.03□□□□□ -0.48
BDF1YLR399C YBR137WP38276 179 aa12.03□□□□□ -0.48
BDF1YLR399C MSC7P38694 644 aa12.03□□□□□ -0.48
BDF1YLR399C NQM1P53228 333 aaPredicted RBP12.03□□□□□ -0.48
BDF1YLR399C YGR168CP53293 376 aa12.03□□□□□ -0.48
BDF1YLR399C RCO1Q04779 684 aa12.03□□□□□ -0.48
BDF1YLR399C MRPL33P20084 86 aa12.02□□□□□ -0.48
BDF1YLR399C PEX34P25584 144 aa12.02□□□□□ -0.48
BDF1YLR399C RTG2P32608 588 aaKnown RBP12.02□□□□□ -0.48
BDF1YLR399C FSH1P38777 243 aaKnown RBP12.02□□□□□ -0.48
BDF1YLR399C YER156CP40093 338 aaKnown RBP12.02□□□□□ -0.48
BDF1YLR399C MZM1Q03429 123 aaPredicted RBP12.02□□□□□ -0.48
BDF1YLR399C ATP14Q12349 124 aa12.02□□□□□ -0.48
BDF1YLR399C LAA1P39526 2014 aa12.02□□□□□ -0.49
BDF1YLR399C MIS1P09440 975 aaKnown RBP12.02□□□□□ -0.49
BDF1YLR399C NCP1P16603 691 aaKnown RBP12.02□□□□□ -0.49
BDF1YLR399C FPS1P23900 669 aa12.02□□□□□ -0.49
BDF1YLR399C TVP38P36164 337 aa12.02□□□□□ -0.49
BDF1YLR399C APD1P38281 316 aa12.02□□□□□ -0.49
BDF1YLR399C YIR007WP40566 764 aa12.02□□□□□ -0.49
BDF1YLR399C PHB1P40961 287 aa12.02□□□□□ -0.49
BDF1YLR399C MPS2P53159 387 aa12.02□□□□□ -0.49
BDF1YLR399C YPL071CQ02864 156 aa12.02□□□□□ -0.49
BDF1YLR399C NBA1Q08229 501 aaKnown RBP12.02□□□□□ -0.49
BDF1YLR399C FEX2Q08991 375 aa12.02□□□□□ -0.49
BDF1YLR399C WTM1Q12363 437 aaKnown RBP12.02□□□□□ -0.49
BDF1YLR399C LAG2Q92325 660 aa12.02□□□□□ -0.49
BDF1YLR399C IPP1P00817 287 aaKnown RBP12.01□□□□□ -0.49
BDF1YLR399C CHS1P08004 1131 aa12.01□□□□□ -0.49
BDF1YLR399C HYM1P32464 399 aa12.01□□□□□ -0.49
BDF1YLR399C ANR2P36090 516 aaPredicted RBP12.01□□□□□ -0.49
BDF1YLR399C ULI1P43604 169 aa12.01□□□□□ -0.49
BDF1YLR399C SSY5P47002 699 aa12.01□□□□□ -0.49
BDF1YLR399C MNP1P53163 194 aaPredicted RBP12.01□□□□□ -0.49
BDF1YLR399C SPC98P53540 846 aa12.01□□□□□ -0.49
BDF1YLR399C CAF40P53829 373 aa12.01□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms