RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C AI3P03877 415 aa10.14□□□□□ -0.79
SHM2YLR058C ARD1P07347 238 aaPredicted RBP10.14□□□□□ -0.79
SHM2YLR058C OCA4P25366 362 aa10.14□□□□□ -0.79
SHM2YLR058C HXT4P32467 576 aa10.14□□□□□ -0.79
SHM2YLR058C CAB3P36076 571 aa10.14□□□□□ -0.79
SHM2YLR058C CAF4P36130 643 aa10.14□□□□□ -0.79
SHM2YLR058C BMT2P38278 337 aa10.14□□□□□ -0.79
SHM2YLR058C HXT6P39003 570 aaKnown RBP10.14□□□□□ -0.79
SHM2YLR058C HXT7P39004 570 aa10.14□□□□□ -0.79
SHM2YLR058C NDE1P40215 560 aa10.14□□□□□ -0.79
SHM2YLR058C NAS6P50086 228 aa10.14□□□□□ -0.79
SHM2YLR058C SGF73P53165 657 aa10.14□□□□□ -0.79
SHM2YLR058C SWS2P53937 143 aa10.14□□□□□ -0.79
SHM2YLR058C TRM82Q03774 444 aa10.14□□□□□ -0.79
SHM2YLR058C HUA2Q12134 243 aa10.14□□□□□ -0.79
SHM2YLR058C SUL2Q12325 893 aa10.14□□□□□ -0.79
SHM2YLR058C SAS5Q99314 248 aa10.14□□□□□ -0.79
SHM2YLR058C DST1P07273 309 aa10.13□□□□□ -0.79
SHM2YLR058C PWP1P21304 576 aaKnown RBP10.13□□□□□ -0.79
SHM2YLR058C PPH21P23594 369 aa10.13□□□□□ -0.79
SHM2YLR058C STE14P32584 239 aa10.13□□□□□ -0.79
SHM2YLR058C TFB1P32776 642 aa10.13□□□□□ -0.79
SHM2YLR058C FRE2P36033 711 aa10.13□□□□□ -0.79
SHM2YLR058C SSU1P41930 458 aa10.13□□□□□ -0.79
SHM2YLR058C ZIM17P42844 174 aa10.13□□□□□ -0.79
SHM2YLR058C PTR3P43606 678 aa10.13□□□□□ -0.79
SHM2YLR058C MPS1P54199 764 aa10.13□□□□□ -0.79
SHM2YLR058C PRP38Q00723 242 aaPredicted RBP10.13□□□□□ -0.79
SHM2YLR058C SGT1Q08446 395 aa10.13□□□□□ -0.79
SHM2YLR058C GPR1Q12361 961 aa10.13□□□□□ -0.79
SHM2YLR058C YCL012CQ8J0M4 134 aa10.13□□□□□ -0.79
SHM2YLR058C RED1P14291 827 aa10.12□□□□□ -0.79
SHM2YLR058C EMC3P36039 253 aa10.12□□□□□ -0.79
SHM2YLR058C FZO1P38297 855 aa10.12□□□□□ -0.79
SHM2YLR058C TRM5P38793 499 aa10.12□□□□□ -0.79
SHM2YLR058C DMA1P38823 416 aa10.12□□□□□ -0.79
SHM2YLR058C RLP7P40693 322 aaKnown RBP10.12□□□□□ -0.79
SHM2YLR058C NUP85P46673 744 aa10.12□□□□□ -0.79
SHM2YLR058C MIG2P53035 382 aa10.12□□□□□ -0.79
SHM2YLR058C IMA1P53051 589 aa10.12□□□□□ -0.79
SHM2YLR058C YDR124WQ04608 324 aa10.12□□□□□ -0.79
SHM2YLR058C MFB1Q04922 465 aa10.12□□□□□ -0.79
SHM2YLR058C YLR413WQ06689 675 aa10.12□□□□□ -0.79
SHM2YLR058C RPN8Q08723 338 aaKnown RBP10.12□□□□□ -0.79
SHM2YLR058C UAF30Q08747 228 aa10.12□□□□□ -0.79
SHM2YLR058C SGV1P23293 657 aaKnown RBP10.11□□□□□ -0.79
SHM2YLR058C GBP2P25555 427 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
SHM2YLR058C PHO91P27514 894 aa10.11□□□□□ -0.79
SHM2YLR058C MUM2P38236 366 aa10.11□□□□□ -0.79
SHM2YLR058C TRM7P38238 310 aaKnown RBP10.11□□□□□ -0.79
SHM2YLR058C MEP2P41948 499 aa10.11□□□□□ -0.79
SHM2YLR058C COG2P53271 262 aa10.11□□□□□ -0.79
SHM2YLR058C BRR1Q99177 341 aaPredicted RBP10.11□□□□□ -0.79
SHM2YLR058C PHO87P25360 923 aa10.1□□□□□ -0.79
SHM2YLR058C PIM1P36775 1133 aa10.1□□□□□ -0.79
SHM2YLR058C GGC1P38988 300 aa10.1□□□□□ -0.79
SHM2YLR058C YAL037WP39728 267 aa10.1□□□□□ -0.79
SHM2YLR058C CIS3P47001 227 aa10.1□□□□□ -0.79
SHM2YLR058C GTO1P48239 356 aa10.1□□□□□ -0.79
SHM2YLR058C ARC35P53731 342 aaKnown RBP10.1□□□□□ -0.79
SHM2YLR058C GIP3Q03016 1276 aa10.1□□□□□ -0.79
SHM2YLR058C YDR476CQ03362 224 aa10.1□□□□□ -0.79
SHM2YLR058C EAF1Q06337 982 aa10.1□□□□□ -0.79
SHM2YLR058C SNX3Q08826 162 aaKnown RBP10.1□□□□□ -0.79
SHM2YLR058C STT4P37297 1900 aa10.1□□□□□ -0.79
SHM2YLR058C MDM35O60200 86 aa10.09□□□□□ -0.79
SHM2YLR058C HTA2P04912 132 aa10.09□□□□□ -0.79
SHM2YLR058C RPS4AP0CX35 261 aaKnown RBP10.09□□□□□ -0.79
SHM2YLR058C RPS4BP0CX36 261 aaKnown RBP10.09□□□□□ -0.79
SHM2YLR058C TRM1P15565 570 aaKnown RBP10.09□□□□□ -0.79
SHM2YLR058C RDS2P19541 446 aaKnown RBP10.09□□□□□ -0.79
SHM2YLR058C MEI5P32489 222 aa10.09□□□□□ -0.79
SHM2YLR058C PET309P32522 965 aaPredicted RBP10.09□□□□□ -0.79
SHM2YLR058C YBR071WP38243 211 aa10.09□□□□□ -0.79
SHM2YLR058C ELO1P39540 310 aa10.09□□□□□ -0.79
SHM2YLR058C CAB2P40506 365 aa10.09□□□□□ -0.79
SHM2YLR058C IAH1P41734 238 aa10.09□□□□□ -0.79
SHM2YLR058C MPS3P47069 682 aa10.09□□□□□ -0.79
SHM2YLR058C MTR3P48240 250 aaPredicted RBP10.09□□□□□ -0.79
SHM2YLR058C KXD1P53158 218 aa10.09□□□□□ -0.79
SHM2YLR058C PRO2P54885 456 aaKnown RBP10.09□□□□□ -0.79
SHM2YLR058C MET31Q03081 177 aa10.09□□□□□ -0.79
SHM2YLR058C ECM11Q04110 302 aa10.09□□□□□ -0.79
SHM2YLR058C BSC2Q05611 235 aa10.09□□□□□ -0.79
SHM2YLR058C THI73Q07904 523 aa10.09□□□□□ -0.79
SHM2YLR058C MCH5Q08777 521 aa10.09□□□□□ -0.79
SHM2YLR058C LEU4P06208 619 aaKnown RBP10.08□□□□□ -0.8
SHM2YLR058C RPS21AP0C0V8 87 aaKnown RBP10.08□□□□□ -0.8
SHM2YLR058C PHO81P17442 1178 aa10.08□□□□□ -0.8
SHM2YLR058C ERG6P25087 383 aaKnown RBP10.08□□□□□ -0.8
SHM2YLR058C ZIP1P31111 875 aa10.08□□□□□ -0.8
SHM2YLR058C FUN30P31380 1131 aa10.08□□□□□ -0.8
SHM2YLR058C YCR087C-AP37263 153 aa10.08□□□□□ -0.8
SHM2YLR058C FTH1P38310 465 aa10.08□□□□□ -0.8
SHM2YLR058C AXL2P38928 823 aa10.08□□□□□ -0.8
SHM2YLR058C HPM1P40481 377 aa10.08□□□□□ -0.8
SHM2YLR058C MET12P46151 657 aa10.08□□□□□ -0.8
SHM2YLR058C HXT16P47185 567 aa10.08□□□□□ -0.8
SHM2YLR058C ERG26P53199 349 aaKnown RBP10.08□□□□□ -0.8
SHM2YLR058C SUN4P53616 420 aa10.08□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms