RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W AI5_ALPHAQ9ZZX1 630 aa3.82□□□□□ -1.8
SSL1YLR005W ACO1P19414 778 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SSL1YLR005W SFL1P20134 766 aa3.81□□□□□ -1.8
SSL1YLR005W CLN1P20437 546 aa3.81□□□□□ -1.8
SSL1YLR005W LDB16P25587 256 aa3.81□□□□□ -1.8
SSL1YLR005W HEM12P32347 362 aaPredicted RBP3.81□□□□□ -1.8
SSL1YLR005W HXT3P32466 567 aaKnown RBP3.81□□□□□ -1.8
SSL1YLR005W IMP3P32899 183 aaPredicted RBP3.81□□□□□ -1.8
SSL1YLR005W RRP14P36080 434 aaKnown RBP3.81□□□□□ -1.8
SSL1YLR005W MTG2P38860 518 aa3.81□□□□□ -1.8
SSL1YLR005W SAW1P39735 261 aa3.81□□□□□ -1.8
SSL1YLR005W RGI2P40188 164 aa3.81□□□□□ -1.8
SSL1YLR005W IME4P41833 600 aa3.81□□□□□ -1.8
SSL1YLR005W SSY5P47002 699 aa3.81□□□□□ -1.8
SSL1YLR005W HLJ1P48353 224 aa3.81□□□□□ -1.8
SSL1YLR005W ASK10P48361 1146 aa3.81□□□□□ -1.8
SSL1YLR005W SAP4P53036 818 aa3.81□□□□□ -1.8
SSL1YLR005W TIM13P53299 105 aa3.81□□□□□ -1.8
SSL1YLR005W GND2P53319 492 aa3.81□□□□□ -1.8
SSL1YLR005W ARP4P80428 489 aa3.81□□□□□ -1.8
SSL1YLR005W YML122CQ03207 126 aa3.81□□□□□ -1.8
SSL1YLR005W ARX1Q03862 593 aaKnown RBP3.81□□□□□ -1.8
SSL1YLR005W MUS81Q04149 632 aaPredicted RBP3.81□□□□□ -1.8
SSL1YLR005W EMI1Q04406 187 aa3.81□□□□□ -1.8
SSL1YLR005W BLS1Q06071 122 aa3.81□□□□□ -1.8
SSL1YLR005W YLR030WQ07967 263 aa3.81□□□□□ -1.8
SSL1YLR005W HOS1Q12214 470 aa3.81□□□□□ -1.8
SSL1YLR005W GPR1Q12361 961 aa3.81□□□□□ -1.8
SSL1YLR005W GTT2Q12390 233 aa3.81□□□□□ -1.8
SSL1YLR005W SPO12P17123 173 aa3.8□□□□□ -1.8
SSL1YLR005W MSP1P28737 362 aa3.8□□□□□ -1.8
SSL1YLR005W NDI1P32340 513 aa3.8□□□□□ -1.8
SSL1YLR005W CYM1P32898 989 aa3.8□□□□□ -1.8
SSL1YLR005W YBL055CP34220 418 aaPredicted RBP3.8□□□□□ -1.8
SSL1YLR005W MTH1P35198 433 aa3.8□□□□□ -1.8
SSL1YLR005W EMC3P36039 253 aa3.8□□□□□ -1.8
SSL1YLR005W STB6P36085 766 aa3.8□□□□□ -1.8
SSL1YLR005W NTR2P36118 322 aaPredicted RBP3.8□□□□□ -1.8
SSL1YLR005W BET3P36149 193 aa3.8□□□□□ -1.8
SSL1YLR005W MRPL10P36520 322 aa3.8□□□□□ -1.8
SSL1YLR005W LDB7P38210 180 aa3.8□□□□□ -1.8
SSL1YLR005W RRT2P38332 387 aa3.8□□□□□ -1.8
SSL1YLR005W YHR033WP38690 423 aa3.8□□□□□ -1.8
SSL1YLR005W DED81P38707 554 aaKnown RBP3.8□□□□□ -1.8
SSL1YLR005W CKB2P38930 258 aa3.8□□□□□ -1.8
SSL1YLR005W MNN1P39106 762 aa3.8□□□□□ -1.8
SSL1YLR005W YMR124WP39523 943 aaKnown RBP3.8□□□□□ -1.8
SSL1YLR005W FLC2P39719 783 aa3.8□□□□□ -1.8
SSL1YLR005W PZF1P39933 429 aa3.8□□□□□ -1.8
SSL1YLR005W YAT2P40017 923 aa3.8□□□□□ -1.8
SSL1YLR005W PMT3P47190 753 aa3.8□□□□□ -1.8
SSL1YLR005W YML6P51998 286 aa3.8□□□□□ -1.8
SSL1YLR005W ASI2P53895 289 aa3.8□□□□□ -1.8
SSL1YLR005W REG1Q00816 1014 aa3.8□□□□□ -1.8
SSL1YLR005W TIM44Q01852 431 aa3.8□□□□□ -1.8
SSL1YLR005W RCO1Q04779 684 aa3.8□□□□□ -1.8
SSL1YLR005W VTA1Q06263 330 aa3.8□□□□□ -1.8
SSL1YLR005W GRS2Q06817 618 aa3.8□□□□□ -1.8
SSL1YLR005W FAP7Q12055 197 aaPredicted RBP3.8□□□□□ -1.8
SSL1YLR005W SMF3Q12078 473 aaPredicted RBP3.8□□□□□ -1.8
SSL1YLR005W FRE7Q12333 620 aa3.8□□□□□ -1.8
SSL1YLR005W RRP12Q12754 1228 aaKnown RBP3.8□□□□□ -1.8
SSL1YLR005W IPP1P00817 287 aaKnown RBP3.79□□□□□ -1.8
SSL1YLR005W YSR3P23501 404 aa3.79□□□□□ -1.8
SSL1YLR005W TSR4P25040 408 aa3.79□□□□□ -1.8
SSL1YLR005W THI4P32318 326 aa3.79□□□□□ -1.8
SSL1YLR005W PET309P32522 965 aaPredicted RBP3.79□□□□□ -1.8
SSL1YLR005W RCK2P38623 610 aa3.79□□□□□ -1.8
SSL1YLR005W PCL5P38794 229 aa3.79□□□□□ -1.8
SSL1YLR005W RTT107P38850 1070 aa3.79□□□□□ -1.8
SSL1YLR005W TIM17P39515 158 aa3.79□□□□□ -1.8
SSL1YLR005W YPR003CP53394 754 aa3.79□□□□□ -1.8
SSL1YLR005W CPR6P53691 371 aaKnown RBP3.79□□□□□ -1.8
SSL1YLR005W NUP100Q02629 959 aa3.79□□□□□ -1.8
SSL1YLR005W RSF1Q05043 376 aa3.79□□□□□ -1.8
SSL1YLR005W CRR1Q05790 422 aa3.79□□□□□ -1.8
SSL1YLR005W ATG9Q12142 997 aa3.79□□□□□ -1.8
SSL1YLR005W LEU9Q12166 604 aaKnown RBP3.79□□□□□ -1.8
SSL1YLR005W YDR018CQ12185 396 aa3.79□□□□□ -1.8
SSL1YLR005W YOR012WQ12351 137 aa3.79□□□□□ -1.8
SSL1YLR005W QCR6P00127 147 aa3.78□□□□□ -1.8
SSL1YLR005W RPL43AP0CX25 92 aaKnown RBP3.78□□□□□ -1.8
SSL1YLR005W RPL43BP0CX26 92 aa3.78□□□□□ -1.8
SSL1YLR005W SKN1P33336 771 aa3.78□□□□□ -1.8
SSL1YLR005W PRP18P33411 251 aaPredicted RBP3.78□□□□□ -1.8
SSL1YLR005W PEX5P35056 612 aa3.78□□□□□ -1.8
SSL1YLR005W MIC60P36112 540 aa3.78□□□□□ -1.8
SSL1YLR005W RPF2P36160 344 aaKnown RBP3.78□□□□□ -1.8
SSL1YLR005W TRM7P38238 310 aaKnown RBP3.78□□□□□ -1.8
SSL1YLR005W YSW1P38280 609 aa3.78□□□□□ -1.8
SSL1YLR005W LYS1P38998 373 aaRIP-Chip data3.78□□□□□ -1.8not detected
SSL1YLR005W LRO1P40345 661 aa3.78□□□□□ -1.8
SSL1YLR005W CFD1P40558 293 aa3.78□□□□□ -1.8
SSL1YLR005W TES1P41903 349 aaKnown RBP3.78□□□□□ -1.8
SSL1YLR005W SPG5P42933 373 aa3.78□□□□□ -1.8
SSL1YLR005W YJR142WP47173 342 aa3.78□□□□□ -1.8
SSL1YLR005W BRO1P48582 844 aa3.78□□□□□ -1.8
SSL1YLR005W RTA1P53047 317 aa3.78□□□□□ -1.8
SSL1YLR005W KAP114P53067 1004 aa3.78□□□□□ -1.8
SSL1YLR005W FRE4P53746 719 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms