RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	CLP1	Q08685	445 aa	Predicted RBP	4.98	□□□□□ -1.61
UBP7	YIL156W	BAG7	Q12128	409 aa		4.98	□□□□□ -1.61
UBP7	YIL156W	SFG1	Q12507	346 aa		4.98	□□□□□ -1.61
UBP7	YIL156W	DFG16	Q99234	619 aa		4.98	□□□□□ -1.61
UBP7	YIL156W	ILV5	P06168	395 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	ART10	P18634	518 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	GSH1	P32477	678 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	YKT6	P36015	200 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	PXL1	P36166	706 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	COP1	P53622	1201 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	SRP54	P20424	541 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	CAD1	P24813	409 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	CDC5	P32562	705 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	AAP1	P37898	856 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	MMS4	P38257	691 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	LIN1	P38852	340 aa	Predicted RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	NPA3	P47122	385 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	MSY1	P48527	492 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	CAF130	P53280	1122 aa	Predicted RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	ROT1	Q03691	256 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	HMI1	Q12039	706 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	ULA1	Q12059	462 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	LPX1	Q12405	387 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	CAT8	P39113	1433 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	ARG81	P05085	880 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	SCH9	P11792	824 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	UNG1	P12887	359 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	SRV2	P17555	526 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	PUP3	P25451	205 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	MVD1	P32377	396 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	GLG1	P36143	616 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	MSG5	P38590	489 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	RFC3	P38629	340 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	FAR3	P46671	204 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	RRB1	Q04225	511 aa	Known RBP	4.97	□□□□□ -1.61
UBP7	YIL156W	NDJ1	Q12366	352 aa		4.97	□□□□□ -1.61
UBP7	YIL156W	PRP6	P19735	899 aa	Predicted RBP	4.96	□□□□□ -1.62
UBP7	YIL156W	SPS22	P25380	463 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	RDS1	P25611	832 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	IMG1	P25626	169 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	CDC20	P26309	610 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	MSR1	P38714	643 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	TOM22	P49334	152 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	INP2	Q03824	705 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	HXK2	P04807	486 aa	Known RBP	4.96	□□□□□ -1.62
UBP7	YIL156W	DPH5	P32469	300 aa	Predicted RBP	4.96	□□□□□ -1.62
UBP7	YIL156W	MRPL37	P36532	105 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	ATP3	P38077	311 aa	Known RBP	4.96	□□□□□ -1.62
UBP7	YIL156W	PEX32	P38292	413 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	PNC1	P53184	216 aa	Known RBP	4.96	□□□□□ -1.62
UBP7	YIL156W	YLR297W	Q05899	129 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	DCS1	Q06151	350 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	MED2	Q12124	431 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	ADF1	Q2V2Q1	113 aa		4.96	□□□□□ -1.62
UBP7	YIL156W	STE2	D6VTK4	431 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	MCM4	P30665	933 aa	Known RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	SIP1	P32578	815 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	HES1	P35843	434 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	TPO5	P36029	618 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	ELF1	P36053	145 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
UBP7	YIL156W	VHS2	P40463	436 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	DPB11	P47027	764 aa	Predicted RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	YGL242C	P53066	181 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	VPS73	P53142	486 aa	Known RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	CDC37	P06101	506 aa	Known RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	PDE2	P06776	526 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	CNE1	P27825	502 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	COT1	P32798	439 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	UIP3	P39547	235 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	ICP55	P40051	511 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	IAH1	P41734	238 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	UBX6	P47049	396 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	YNR014W	P53719	212 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	MPP6	P53725	186 aa	Predicted RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	YMR160W	Q03823	816 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	YDR109C	Q04585	715 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	ATG9	Q12142	997 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	INP53	Q12271	1107 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	RPL31B	P0C2H9	113 aa	Known RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	ULP2	P40537	1034 aa	Predicted RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	NMD5	P46970	1048 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	YIP5	P53108	310 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	MPS2	P53159	387 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	ADE16	P54113	591 aa	Known RBP	4.95	□□□□□ -1.62
UBP7	YIL156W	RTT109	Q07794	436 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	MTR10	Q99189	972 aa		4.95	□□□□□ -1.62
UBP7	YIL156W	KGD2	P19262	463 aa	Predicted RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	ELO2	P25358	347 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	MET22	P32179	357 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	DOA4	P32571	926 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	PHO11	P35842	467 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	CTP1	P38152	299 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	PHO12	P38693	467 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	IMD2	P38697	523 aa	Known RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	ELO1	P39540	310 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	YIR042C	P40586	236 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	YRM1	Q12340	786 aa		4.94	□□□□□ -1.62
UBP7	YIL156W	MDM20	Q12387	796 aa	Known RBP	4.94	□□□□□ -1.62
UBP7	YIL156W	CAR1	P00812	333 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms