RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TCA17, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCA17	YEL048C	TUL1	P36096	758 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	SHO1	P40073	367 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	ALK1	P43633	760 aa	Known RBP	4.17	□□□□□ -1.74
TCA17	YEL048C	IRC15	Q02733	499 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	YKU80	Q04437	629 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	BNA5	Q05979	453 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	VPS74	Q06385	345 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	TLG2	Q08144	397 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	YOR365C	Q08844	703 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	ENT1	Q12518	454 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	RAD52	P06778	471 aa	Known RBP	4.16	□□□□□ -1.74
TCA17	YEL048C	ATR1	P13090	542 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	AVT5	P38176	459 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	ALG8	P40351	577 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
TCA17	YEL048C	TOF2	Q02208	771 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	NGL3	Q03210	505 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	YEH1	Q07804	573 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	THP1	Q08231	455 aa		4.16	□□□□□ -1.74
TCA17	YEL048C	HEM2	P05373	342 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	PEP4	P07267	405 aa	Known RBP	4.15	□□□□□ -1.75
TCA17	YEL048C	PAP1	P29468	568 aa	Known RBP	4.15	□□□□□ -1.75
TCA17	YEL048C	UTR4	P32626	227 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	TIF3	P34167	436 aa	Known RBP	4.15	□□□□□ -1.75
TCA17	YEL048C	FLC2	P39719	783 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	IDP2	P41939	412 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	ELP2	P42935	788 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	NMD4	Q12129	218 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	YPT6	Q99260	215 aa		4.15	□□□□□ -1.75
TCA17	YEL048C	SAN1	P22470	610 aa		4.14	□□□□□ -1.75
TCA17	YEL048C	PAH1	P32567	862 aa		4.14	□□□□□ -1.75
TCA17	YEL048C	BNA4	P38169	460 aa		4.14	□□□□□ -1.75
TCA17	YEL048C	PCA1	P38360	1216 aa		4.14	□□□□□ -1.75
TCA17	YEL048C	PHO92	Q06390	306 aa		4.14	□□□□□ -1.75
TCA17	YEL048C	SUC2	P00724	532 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	YCR022C	P25620	114 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	NOP4	P37838	685 aa	Known RBP	4.13	□□□□□ -1.75
TCA17	YEL048C	MSR1	P38714	643 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	CCT6	P39079	546 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	YPI1	P43587	155 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	DRN1	P53255	507 aa	Known RBP	4.13	□□□□□ -1.75
TCA17	YEL048C	GPI1	P53306	609 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	COQ9	Q05779	260 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	RCN2	Q12044	265 aa		4.13	□□□□□ -1.75
TCA17	YEL048C	SEM1	O94742	89 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	DUG2	P38149	878 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	REG2	P38232	338 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	TIF5	P38431	405 aa	Known RBP	4.12	□□□□□ -1.75
TCA17	YEL048C	TIF4631	P39935	952 aa	Known RBP	4.12	□□□□□ -1.75
TCA17	YEL048C	VID27	P40157	782 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	IMD4	P50094	524 aa	Known RBP	4.12	□□□□□ -1.75
TCA17	YEL048C	YGL242C	P53066	181 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	WSC2	P53832	503 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
TCA17	YEL048C	PEP3	P27801	918 aa		4.11	□□□□□ -1.75
TCA17	YEL048C	YME1	P32795	747 aa		4.11	□□□□□ -1.75
TCA17	YEL048C	TCM62	P38228	572 aa	Known RBP	4.11	□□□□□ -1.75
TCA17	YEL048C	NOP16	P40007	231 aa	Known RBP	4.11	□□□□□ -1.75
TCA17	YEL048C	YGR066C	P53242	292 aa		4.11	□□□□□ -1.75
TCA17	YEL048C	YJR112W-A	Q3E743	109 aa		4.11	□□□□□ -1.75
TCA17	YEL048C	BRR1	Q99177	341 aa	Predicted RBP	4.11	□□□□□ -1.75
TCA17	YEL048C	TOP1	P04786	769 aa		4.1	□□□□□ -1.75
TCA17	YEL048C	REV1	P12689	985 aa		4.1	□□□□□ -1.75
TCA17	YEL048C	PUT3	P25502	979 aa	Predicted RBP	4.1	□□□□□ -1.75
TCA17	YEL048C	TCD2	P36101	447 aa	Known RBP	4.1	□□□□□ -1.75
TCA17	YEL048C	SPG5	P42933	373 aa		4.1	□□□□□ -1.75
TCA17	YEL048C	ZPR1	P53303	486 aa	Known RBP	4.1	□□□□□ -1.75
TCA17	YEL048C	VPS38	Q05919	439 aa		4.1	□□□□□ -1.75
TCA17	YEL048C	RLM1	Q12224	676 aa		4.1	□□□□□ -1.75
TCA17	YEL048C	LPD1	P09624	499 aa	Known RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	HSC82	P15108	705 aa	Known RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	AAC3	P18238	307 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	MSN2	P33748	704 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	HAT2	P39984	401 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	MKT1	P40850	830 aa	Known RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	GWT1	P47026	490 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	HEF3	P53978	1044 aa	Known RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	FIN1	Q03898	291 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	RBS1	Q05672	457 aa	Known RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	HNT3	Q08702	217 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	CTI6	Q08923	506 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	YDR056C	Q12025	205 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	CFT2	Q12102	859 aa	Predicted RBP	4.09	□□□□□ -1.75
TCA17	YEL048C	AVL9	Q12500	764 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	CTF3	Q12748	733 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	YCL021W-A	Q96VH3	125 aa		4.09	□□□□□ -1.75
TCA17	YEL048C	PMR1	P13586	950 aa		4.08	□□□□□ -1.76
TCA17	YEL048C	GLK1	P17709	500 aa	Known RBP	4.08	□□□□□ -1.76
TCA17	YEL048C	RSM22	P36056	628 aa		4.08	□□□□□ -1.76
TCA17	YEL048C	TMA108	P40462	946 aa		4.08	□□□□□ -1.76
TCA17	YEL048C	AIM22	P47051	409 aa		4.08	□□□□□ -1.76
TCA17	YEL048C	MSO1	P53604	210 aa	Known RBP	4.08	□□□□□ -1.76
TCA17	YEL048C	GAL80	P04387	435 aa		4.07	□□□□□ -1.76
TCA17	YEL048C	CBS1	P14066	229 aa		4.07	□□□□□ -1.76
TCA17	YEL048C	CPR1	P14832	162 aa	Known RBP	4.07	□□□□□ -1.76
TCA17	YEL048C	PRP2	P20095	876 aa	Predicted RBP	4.07	□□□□□ -1.76
TCA17	YEL048C	FUN19	P28003	413 aa	Predicted RBP	4.07	□□□□□ -1.76
TCA17	YEL048C	SWH1	P35845	1188 aa		4.07	□□□□□ -1.76
TCA17	YEL048C	MRX6	P48564	524 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms