RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W RIB4P50861 169 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W DBP6P53734 629 aaKnown RBP5.66□□□□□ -1.5
VMS1YDR049W SNZ2P53824 298 aa5.66□□□□□ -1.5
VMS1YDR049W BOP3P53958 396 aa5.66□□□□□ -1.5
VMS1YDR049W UFD4P33202 1483 aa5.66□□□□□ -1.5
VMS1YDR049W FAD1P38913 306 aa5.66□□□□□ -1.5
VMS1YDR049W CIN1P40987 1014 aa5.66□□□□□ -1.5
VMS1YDR049W IME4P41833 600 aa5.66□□□□□ -1.5
VMS1YDR049W CTK2P46962 323 aa5.66□□□□□ -1.5
VMS1YDR049W CAF130P53280 1122 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W YKR011CQ02209 353 aa5.66□□□□□ -1.5
VMS1YDR049W YPL108WQ02872 168 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W RPC11Q04307 110 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W APC4Q04601 652 aa5.66□□□□□ -1.5
VMS1YDR049W RSA3Q05942 220 aaKnown RBP5.66□□□□□ -1.5
VMS1YDR049W BSC6Q08280 497 aa5.66□□□□□ -1.5
VMS1YDR049W FMP16Q12497 93 aa5.66□□□□□ -1.5
VMS1YDR049W MSF1P08425 469 aa5.65□□□□□ -1.5
VMS1YDR049W HMG2P12684 1045 aa5.65□□□□□ -1.5
VMS1YDR049W ADH7P25377 361 aa5.65□□□□□ -1.5
VMS1YDR049W GCD7P32502 381 aaPredicted RBP5.65□□□□□ -1.5
VMS1YDR049W TCD2P36101 447 aaKnown RBP5.65□□□□□ -1.5
VMS1YDR049W APT2P36973 181 aa5.65□□□□□ -1.5
VMS1YDR049W GCV1P48015 400 aa5.65□□□□□ -1.5
VMS1YDR049W YGL036WP53185 909 aaPredicted RBP5.65□□□□□ -1.5
VMS1YDR049W VOA1P53262 265 aa5.65□□□□□ -1.5
VMS1YDR049W HST3P53687 447 aa5.65□□□□□ -1.5
VMS1YDR049W SKO1Q02100 647 aa5.65□□□□□ -1.5
VMS1YDR049W ENT5Q03769 411 aaKnown RBP5.65□□□□□ -1.5
VMS1YDR049W STP3Q05937 343 aa5.65□□□□□ -1.5
VMS1YDR049W SEC10Q06245 871 aa5.65□□□□□ -1.5
VMS1YDR049W CTS2Q06350 511 aa5.65□□□□□ -1.5
VMS1YDR049W VPS74Q06385 345 aa5.65□□□□□ -1.5
VMS1YDR049W ATG17Q06410 417 aa5.65□□□□□ -1.5
VMS1YDR049W FRE3Q08905 711 aa5.65□□□□□ -1.5
VMS1YDR049W MDM20Q12387 796 aaKnown RBP5.65□□□□□ -1.5
VMS1YDR049W DCP1Q12517 231 aaPredicted RBP5.65□□□□□ -1.5
VMS1YDR049W SIN3P22579 1536 aa5.65□□□□□ -1.51
VMS1YDR049W RNR2P09938 399 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W PEP5P12868 1029 aa5.64□□□□□ -1.51
VMS1YDR049W VPS33P20795 691 aa5.64□□□□□ -1.51
VMS1YDR049W PRP45P28004 379 aaPredicted RBP5.64□□□□□ -1.51
VMS1YDR049W TPS2P31688 896 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W TYE7P33122 291 aaPredicted RBP5.64□□□□□ -1.51
VMS1YDR049W ASH1P34233 588 aa5.64□□□□□ -1.51
VMS1YDR049W YKL071WP36086 256 aa5.64□□□□□ -1.51
VMS1YDR049W LIF1P53150 421 aa5.64□□□□□ -1.51
VMS1YDR049W CUS2P53830 285 aaPredicted RBP5.64□□□□□ -1.51
VMS1YDR049W INA17Q02888 182 aa5.64□□□□□ -1.51
VMS1YDR049W CAB5Q03941 241 aa5.64□□□□□ -1.51
VMS1YDR049W ARP10Q04549 284 aa5.64□□□□□ -1.51
VMS1YDR049W GFD1Q04839 188 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W SLP1Q12232 587 aa5.64□□□□□ -1.51
VMS1YDR049W ATG31Q12421 196 aa5.64□□□□□ -1.51
VMS1YDR049W BUD4P47136 1447 aa5.64□□□□□ -1.51
VMS1YDR049W RAD7P06779 565 aa5.64□□□□□ -1.51
VMS1YDR049W ARD1P07347 238 aaPredicted RBP5.64□□□□□ -1.51
VMS1YDR049W URA4P20051 364 aa5.64□□□□□ -1.51
VMS1YDR049W MRPL8P22353 238 aa5.64□□□□□ -1.51
VMS1YDR049W YCP4P25349 247 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W IMP3P32899 183 aaPredicted RBP5.64□□□□□ -1.51
VMS1YDR049W TUL1P36096 758 aa5.64□□□□□ -1.51
VMS1YDR049W PPS1P38148 807 aa5.64□□□□□ -1.51
VMS1YDR049W TOS1P38288 455 aa5.64□□□□□ -1.51
VMS1YDR049W DSN1P40568 576 aa5.64□□□□□ -1.51
VMS1YDR049W DIA3P52290 468 aa5.64□□□□□ -1.51
VMS1YDR049W ZPR1P53303 486 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W DIA1P54005 336 aa5.64□□□□□ -1.51
VMS1YDR049W RSM24Q03976 319 aa5.64□□□□□ -1.51
VMS1YDR049W SNA4Q07549 140 aa5.64□□□□□ -1.51
VMS1YDR049W TIP41Q12199 356 aa5.64□□□□□ -1.51
VMS1YDR049W MTR10Q99189 972 aa5.64□□□□□ -1.51
VMS1YDR049W PNO1Q99216 274 aaKnown RBP5.64□□□□□ -1.51
VMS1YDR049W YLL067CQ07888 1374 aa5.64□□□□□ -1.51
VMS1YDR049W SSK2P53599 1579 aa5.64□□□□□ -1.51
VMS1YDR049W RAD9P14737 1309 aa5.63□□□□□ -1.51
VMS1YDR049W TRP3P00937 484 aa5.63□□□□□ -1.51
VMS1YDR049W GAL4P04386 881 aa5.63□□□□□ -1.51
VMS1YDR049W FRS1P15624 595 aaKnown RBP5.63□□□□□ -1.51
VMS1YDR049W COQ1P18900 473 aa5.63□□□□□ -1.51
VMS1YDR049W ATP7P30902 174 aa5.63□□□□□ -1.51
VMS1YDR049W VPS51P36116 164 aa5.63□□□□□ -1.51
VMS1YDR049W AIM29P36154 155 aa5.63□□□□□ -1.51
VMS1YDR049W ZTA1P38230 334 aaKnown RBP5.63□□□□□ -1.51
VMS1YDR049W RFC4P40339 323 aaKnown RBP5.63□□□□□ -1.51
VMS1YDR049W SLX9P53251 210 aaPredicted RBP5.63□□□□□ -1.51
VMS1YDR049W YNL181WP53878 407 aa5.63□□□□□ -1.51
VMS1YDR049W WAR1Q03631 944 aa5.63□□□□□ -1.51
VMS1YDR049W YLR283WQ05867 314 aa5.63□□□□□ -1.51
VMS1YDR049W YPR078CQ06813 372 aa5.63□□□□□ -1.51
VMS1YDR049W BTS1Q12051 335 aa5.63□□□□□ -1.51
VMS1YDR049W YDL109CQ12103 647 aa5.63□□□□□ -1.51
VMS1YDR049W RLM1Q12224 676 aa5.63□□□□□ -1.51
VMS1YDR049W TDH2P00358 332 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W TDH3P00359 332 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VMS1YDR049W RPS3P05750 240 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W PDA1P16387 420 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W SAR1P20606 190 aaKnown RBP5.62□□□□□ -1.51
VMS1YDR049W DAL2P25335 343 aa5.62□□□□□ -1.51
VMS1YDR049W PRE4P30657 266 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms