RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C SEM1O94742 89 aa1.57□□□□□ -2.16
VPS54YDR027C INH1P01097 85 aa1.57□□□□□ -2.16
VPS54YDR027C RPS2P25443 254 aaKnown RBP1.57□□□□□ -2.16
VPS54YDR027C NOC2P39744 710 aaKnown RBP1.57□□□□□ -2.16
VPS54YDR027C IST3P40565 148 aaPredicted RBP1.57□□□□□ -2.16
VPS54YDR027C YDL186WP48568 277 aa1.57□□□□□ -2.16
VPS54YDR027C VID30P53076 958 aa1.57□□□□□ -2.16
VPS54YDR027C ART5P53244 586 aaKnown RBP1.57□□□□□ -2.16
VPS54YDR027C PSK2Q08217 1101 aa1.57□□□□□ -2.16
VPS54YDR027C YOL159CQ08300 171 aa1.57□□□□□ -2.16
VPS54YDR027C MRS3P10566 314 aa1.57□□□□□ -2.16
VPS54YDR027C ALY1P36117 915 aa1.57□□□□□ -2.16
VPS54YDR027C GUF1P46943 645 aa1.57□□□□□ -2.16
VPS54YDR027C SIP4P46954 829 aa1.57□□□□□ -2.16
VPS54YDR027C VPS4P52917 437 aa1.57□□□□□ -2.16
VPS54YDR027C DUO1P53168 247 aaKnown RBP1.57□□□□□ -2.16
VPS54YDR027C BSC5P53755 489 aa1.57□□□□□ -2.16
VPS54YDR027C RCO1Q04779 684 aa1.57□□□□□ -2.16
VPS54YDR027C CRN1Q06440 651 aa1.57□□□□□ -2.16
VPS54YDR027C YOR019WQ99248 730 aa1.57□□□□□ -2.16
VPS54YDR027C CDC31P06704 161 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C RPL19AP0CX82 189 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C RPL19BP0CX83 189 aaPredicted RBP1.56□□□□□ -2.16
VPS54YDR027C NUP120P35729 1037 aa1.56□□□□□ -2.16
VPS54YDR027C ESL2P36168 1195 aa1.56□□□□□ -2.16
VPS54YDR027C AAP1P37898 856 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C PHO90P39535 881 aa1.56□□□□□ -2.16
VPS54YDR027C IKS1P47042 667 aa1.56□□□□□ -2.16
VPS54YDR027C ASE1P50275 885 aa1.56□□□□□ -2.16
VPS54YDR027C TDA7P53882 636 aaPredicted RBP1.56□□□□□ -2.16
VPS54YDR027C NGL3Q03210 505 aa1.56□□□□□ -2.16
VPS54YDR027C RAD30Q04049 632 aa1.56□□□□□ -2.16
VPS54YDR027C RBA50Q04418 439 aa1.56□□□□□ -2.16
VPS54YDR027C MFB1Q04922 465 aa1.56□□□□□ -2.16
VPS54YDR027C RIX7Q07844 837 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C YEH2Q07950 538 aa1.56□□□□□ -2.16
VPS54YDR027C KAR3P17119 729 aa1.56□□□□□ -2.16
VPS54YDR027C SPO16P17122 198 aa1.56□□□□□ -2.16
VPS54YDR027C SGF29P25554 259 aa1.56□□□□□ -2.16
VPS54YDR027C AGA1P32323 725 aa1.56□□□□□ -2.16
VPS54YDR027C NTR2P36118 322 aaPredicted RBP1.56□□□□□ -2.16
VPS54YDR027C KTR3P38130 404 aaPredicted RBP1.56□□□□□ -2.16
VPS54YDR027C PFK26P40433 827 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C INN1P53901 409 aa1.56□□□□□ -2.16
VPS54YDR027C NUP100Q02629 959 aa1.56□□□□□ -2.16
VPS54YDR027C TSR2Q06672 205 aaKnown RBP1.56□□□□□ -2.16
VPS54YDR027C SKM1Q12469 655 aa1.56□□□□□ -2.16
VPS54YDR027C CDC24P11433 854 aaPredicted RBP1.55□□□□□ -2.16
VPS54YDR027C OLE1P21147 510 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C GAC1P28006 793 aa1.55□□□□□ -2.16
VPS54YDR027C LOS1P33418 1100 aaPredicted RBP1.55□□□□□ -2.16
VPS54YDR027C PFF1P38244 976 aa1.55□□□□□ -2.16
VPS54YDR027C ECM10P39987 644 aa1.55□□□□□ -2.16
VPS54YDR027C SEC24P40482 926 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C YIL060WP40519 144 aa1.55□□□□□ -2.16
VPS54YDR027C ARC1P46672 376 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C DSD1P53095 428 aa1.55□□□□□ -2.16
VPS54YDR027C YGL082WP53155 381 aa1.55□□□□□ -2.16
VPS54YDR027C PIL1P53252 339 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C ARE2P53629 642 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C GIR2Q03768 265 aaPredicted RBP1.55□□□□□ -2.16
VPS54YDR027C RTP1Q12751 981 aa1.55□□□□□ -2.16
VPS54YDR027C RPL15AP05748 204 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C LSB5P25369 354 aa1.55□□□□□ -2.16
VPS54YDR027C ICL1P28240 557 aaPredicted RBP1.55□□□□□ -2.16
VPS54YDR027C MCM4P30665 933 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C PHD1P36093 366 aa1.55□□□□□ -2.16
VPS54YDR027C YBR225WP38321 900 aa1.55□□□□□ -2.16
VPS54YDR027C SWP82P43554 623 aa1.55□□□□□ -2.16
VPS54YDR027C AAD10P47182 288 aa1.55□□□□□ -2.16
VPS54YDR027C MRX6P48564 524 aa1.55□□□□□ -2.16
VPS54YDR027C NNF2P53253 936 aa1.55□□□□□ -2.16
VPS54YDR027C RBG2P53295 368 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C MUB1Q03162 620 aa1.55□□□□□ -2.16
VPS54YDR027C MSS11Q03825 758 aa1.55□□□□□ -2.16
VPS54YDR027C HCR1Q05775 265 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C ERG27Q12452 347 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C SET6Q12529 373 aa1.55□□□□□ -2.16
VPS54YDR027C YBR126W-AQ8TGU7 68 aa1.55□□□□□ -2.16
VPS54YDR027C YLR419WQ06698 1435 aaKnown RBP1.55□□□□□ -2.16
VPS54YDR027C MRP7P12687 371 aa1.54□□□□□ -2.16
VPS54YDR027C YCK1P23291 538 aa1.54□□□□□ -2.16
VPS54YDR027C SRB5P32585 307 aa1.54□□□□□ -2.16
VPS54YDR027C SAC6P32599 642 aaKnown RBP1.54□□□□□ -2.16
VPS54YDR027C JNM1P36224 373 aa1.54□□□□□ -2.16
VPS54YDR027C RPH1P39956 796 aa1.54□□□□□ -2.16
VPS54YDR027C SLZ1P40167 298 aa1.54□□□□□ -2.16
VPS54YDR027C IME4P41833 600 aa1.54□□□□□ -2.16
VPS54YDR027C LCL3P53153 274 aa1.54□□□□□ -2.16
VPS54YDR027C VPS75P53853 264 aa1.54□□□□□ -2.16
VPS54YDR027C RSM28Q03430 361 aa1.54□□□□□ -2.16
VPS54YDR027C FMP45Q07651 309 aa1.54□□□□□ -2.16
VPS54YDR027C RDR1Q08904 546 aa1.54□□□□□ -2.16
VPS54YDR027C NBP2Q12163 236 aa1.54□□□□□ -2.16
VPS54YDR027C FOB1O13329 566 aa1.54□□□□□ -2.16
VPS54YDR027C MCK1P21965 375 aaKnown RBP1.54□□□□□ -2.16
VPS54YDR027C POL4P25615 582 aa1.54□□□□□ -2.16
VPS54YDR027C CMK1P27466 446 aaKnown RBP1.54□□□□□ -2.16
VPS54YDR027C ACH1P32316 526 aa1.54□□□□□ -2.16
VPS54YDR027C NFU1P32860 256 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms