RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	YLR036C	Q07986	203 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	MMP1	Q12372	583 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	IDI1	P15496	288 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	YAP1	P19880	650 aa	Known RBP	4.11	□□□□□ -1.75
BRE4	YDL231C	MNE1	P24720	663 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	MRP8	P35719	219 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	APM3	P38153	483 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	YBR138C	P38277	524 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	YHR020W	P38708	688 aa	Known RBP	4.11	□□□□□ -1.75
BRE4	YDL231C	MUP3	P38734	546 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	FAA2	P39518	744 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	COA1	P40452	197 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	FKH2	P41813	862 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	MSC1	Q03104	513 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	YML119W	Q03208	357 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	GMC2	Q06201	188 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	BSP1	Q06604	576 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	RAD34	Q06665	692 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	ECM30	Q06673	1274 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	REH1	Q06709	432 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	YLR149C	Q99296	730 aa		4.11	□□□□□ -1.75
BRE4	YDL231C	RPS9A	O13516	197 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	SEC63	P14906	663 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	MET8	P15807	274 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	AMD2	P22580	549 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	CIN8	P27895	1000 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	FUN30	P31380	1131 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	SEC17	P32602	292 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	FAD1	P38913	306 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	SSN3	P39073	555 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	DOT6	P40059	670 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	SEC28	P40509	296 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	MRPS18	P42847	217 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	YJR030C	P47101	745 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	PSP1	P50896	841 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	COG1	P53079	417 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	SLM2	P53955	656 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	YML131W	Q03102	365 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	YDR132C	Q03900	495 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	MCP2	Q06567	569 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	CIR2	Q08822	631 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	TGL5	Q12043	749 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	IOC2	Q12072	812 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	YPL245W	Q12179	454 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	LEU4	P06208	619 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	CDC31	P06704	161 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	TFB1	P32776	642 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	GIP1	P38229	639 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	NDE1	P40215	560 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	DIM1	P41819	318 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	MPS3	P47069	682 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	ORC3	P54790	616 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	ECM9	Q02202	377 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	ATG29	Q12092	213 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	IES3	Q12345	250 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	RPS14A	P06367	137 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	BCY1	P07278	416 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	UNG1	P12887	359 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	SNF4	P12904	322 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	PUP3	P25451	205 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	YKL097C	P34245	136 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	ATG7	P38862	630 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	CYC2	P38909	366 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	RPS14B	P39516	138 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	GDH3	P39708	457 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	IME4	P41833	600 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	PFA3	P42836	336 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	BNA3	P47039	444 aa	Known RBP	4.1	□□□□□ -1.75
BRE4	YDL231C	SWC4	P53201	476 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	RCF2	P53721	224 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	FMN1	Q03778	218 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	RAD33	Q04231	177 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	HSP31	Q04432	237 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	YDR286C	Q05530	114 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	CDA1	Q06702	301 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	BUD7	Q08754	746 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	PST1	Q12355	444 aa		4.1	□□□□□ -1.75
BRE4	YDL231C	RSR1	P13856	272 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	POL30	P15873	258 aa	Known RBP	4.09	□□□□□ -1.75
BRE4	YDL231C	AAR2	P32357	355 aa	Predicted RBP	4.09	□□□□□ -1.75
BRE4	YDL231C	PET309	P32522	965 aa	Predicted RBP	4.09	□□□□□ -1.75
BRE4	YDL231C	AST1	P35183	429 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	BMT2	P38278	337 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	KTR7	P40504	517 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	GCD10	P41814	478 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	STR3	P53101	465 aa	Known RBP	4.09	□□□□□ -1.75
BRE4	YDL231C	TMN2	Q04562	672 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	CIA1	Q05583	330 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	COS7	Q07788	383 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	GYP1	Q08484	637 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	YLR126C	Q12288	251 aa		4.09	□□□□□ -1.75
BRE4	YDL231C	PHO81	P17442	1178 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	EMC1	P25574	760 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	SSE2	P32590	693 aa	Known RBP	4.09	□□□□□ -1.76
BRE4	YDL231C	ALY1	P36117	915 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	TIM17	P39515	158 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	SPF1	P39986	1215 aa	Known RBP	4.09	□□□□□ -1.76
BRE4	YDL231C	PAC11	P40960	533 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	BUD13	P46947	266 aa	Predicted RBP	4.09	□□□□□ -1.76
BRE4	YDL231C	YJR120W	P47157	116 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms