RNA–Protein interactions for RNA: YDL175C

AIR2, Transcript of RNA-binding subunit of the TRAMP nuclear RNA surveillance complex, yeast

Gene AIR2, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIR2	YDL175C	ILS1	P09436	1072 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	SRV2	P17555	526 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	CDC10	P25342	322 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	URA7	P28274	579 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	BRF1	P29056	596 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	DEP1	P31385	405 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	HXT3	P32466	567 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	SET3	P36124	751 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	GDT1	P38301	280 aa	Predicted RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	SRP72	P38688	640 aa	Known RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	PPE1	P38796	400 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	AIM18	P38884	321 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	SCC4	P40090	624 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	PUG1	P40100	303 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	MEP1	P40260	492 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	IMA5	P40884	581 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	RRT5	P43607	289 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	BIT61	P47041	543 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	GPI8	P49018	411 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	HOS2	P53096	452 aa	Predicted RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	BET4	Q00618	327 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	YMR206W	Q03695	313 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	FAR8	Q05040	523 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	HRD3	Q05787	833 aa		4.93	□□□□□ -1.62
AIR2	YDL175C	RTK1	Q12100	620 aa	Predicted RBP	4.93	□□□□□ -1.62
AIR2	YDL175C	ADK2	P26364	225 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	RAD5	P32849	1169 aa	Predicted RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	YPT7	P32939	208 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	LOS1	P33418	1100 aa	Predicted RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	SMF2	P38778	549 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	SPC97	P38863	823 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	FHL1	P39521	936 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	DSN1	P40568	576 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	AXL1	P40851	1208 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	OPT1	P40897	799 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	MAD2	P40958	196 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	CDC1	P40986	491 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	GUF1	P46943	645 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	NOP9	P47077	666 aa	Known RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	TAH11	P47112	604 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	YGR250C	P53316	781 aa	Known RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	YPR003C	P53394	754 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	TEX1	P53851	422 aa	Known RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	KTR6	P54070	446 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	AIM32	Q04689	311 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	UTP21	Q06078	939 aa	Predicted RBP	4.92	□□□□□ -1.62
AIR2	YDL175C	AAD4	Q07747	329 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	ACF2	Q12168	779 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	GPM3	Q12326	303 aa		4.92	□□□□□ -1.62
AIR2	YDL175C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
AIR2	YDL175C	ATP1	P07251	545 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	ALG7	P07286	448 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	CLB1	P24868	471 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	CWH43	P25618	953 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	DSS4	P32601	143 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YSW1	P38280	609 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	IFA38	P38286	347 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YLF2	P38746	405 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	FSH1	P38777	243 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	PRM9	P39551	298 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YER010C	P40011	234 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YFL040W	P43562	540 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	RMD8	P43620	662 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	PEF1	P53238	335 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	LSC1	P53598	329 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	YNR071C	P53757	342 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	KTR5	P53966	522 aa	Predicted RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	VPS9	P54787	451 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	SLT2	Q00772	484 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	ADA2	Q02336	434 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YMR102C	Q03177	834 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YML119W	Q03208	357 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	PRP3	Q03338	469 aa	Predicted RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	CTK1	Q03957	528 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	ADE13	Q05911	482 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	NRT1	Q08485	598 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	DIA2	Q08496	732 aa	Predicted RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	LEA1	Q08963	238 aa	Predicted RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	TRM8	Q12009	286 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	HRT3	Q12347	344 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	DBP10	Q12389	995 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	POM34	Q12445	299 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	HRP1	Q99383	534 aa	Known RBP	4.91	□□□□□ -1.62
AIR2	YDL175C	AI5_ALPHA	Q9ZZX1	630 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	YLR422W	Q06409	1932 aa		4.91	□□□□□ -1.62
AIR2	YDL175C	PHO5	P00635	467 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	TEF1	P02994	458 aa	Known RBP	4.9	□□□□□ -1.63
AIR2	YDL175C	KGD2	P19262	463 aa	Predicted RBP	4.9	□□□□□ -1.63
AIR2	YDL175C	SEC15	P22224	910 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	ERG6	P25087	383 aa	Known RBP	4.9	□□□□□ -1.63
AIR2	YDL175C	AAD3	P25612	363 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	YIH1	P25637	258 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	PRE4	P30657	266 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	YKL100C	P34248	587 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	YBR056W	P38081	501 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	YBR032W	P38223	100 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	RFS1	P38234	210 aa	Known RBP	4.9	□□□□□ -1.63
AIR2	YDL175C	SIF2	P38262	535 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	YBR138C	P38277	524 aa		4.9	□□□□□ -1.63
AIR2	YDL175C	REV7	P38927	245 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 132.1 ms