RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 NTRK3Q16288 839 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 CLEC4DQ8WXI8 215 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 HOMER2Q9NSB8 354 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
DNMT1-212ENST00000587197 PFASO15067 1338 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 CNTNAP5Q8WYK1 1306 aa19.97■□□□□ 0.79
DNMT1-212ENST00000587197 SEPT4O43236 478 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 PPP1R11O60927 126 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 IFNAR1P17181 557 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 MNX1P50219 401 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 ZNF792Q3KQV3 632 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 MUM1L1Q5H9M0 696 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 CMTR1Q8N1G2 835 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 ANKRD35Q8N283 1001 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 MSL3Q8N5Y2 521 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 ARRDC4Q8NCT1 418 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 LARP6Q9BRS8 491 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 TINF2Q9BSI4 451 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 A1CFQ9NQ94 594 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 PCDHA1Q9Y5I3 950 aa19.96■□□□□ 0.79
DNMT1-212ENST00000587197 ZNFX1Q9P2E3 1918 aaKnown RBP19.96■□□□□ 0.79
DNMT1-212ENST00000587197 BAZ2BQ9UIF8 2168 aaKnown RBP19.95■□□□□ 0.78
DNMT1-212ENST00000587197 CCT2P78371 535 aaKnown RBP19.95■□□□□ 0.78
DNMT1-212ENST00000587197 USH1GQ495M9 461 aa19.95■□□□□ 0.78
DNMT1-212ENST00000587197 HABP4Q5JVS0 413 aaKnown RBP19.95■□□□□ 0.78
DNMT1-212ENST00000587197 MCF2L2Q86YR7 1114 aa19.95■□□□□ 0.78
DNMT1-212ENST00000587197 CCDC82Q8N4S0 544 aa19.95■□□□□ 0.78
DNMT1-212ENST00000587197 TRPV1Q8NER1 839 aa19.95■□□□□ 0.78
DNMT1-212ENST00000587197 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
DNMT1-212ENST00000587197 NFIBO00712 420 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
DNMT1-212ENST00000587197 ST18O60284 1047 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 TAL1P17542 331 aaPredicted RBP19.94■□□□□ 0.78
DNMT1-212ENST00000587197 GHRHRQ02643 423 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
DNMT1-212ENST00000587197 NCOA5Q9HCD5 579 aaKnown RBP19.94■□□□□ 0.78
DNMT1-212ENST00000587197 MAP3K20Q9NYL2 800 aaKnown RBP19.94■□□□□ 0.78
DNMT1-212ENST00000587197 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 CNPY2Q9Y2B0 182 aa19.94■□□□□ 0.78
DNMT1-212ENST00000587197 hCG_1984214I3L0E3 225 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 DNM1LO00429 736 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 COL6A1P12109 1028 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 ME3Q16798 604 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 PRAMEF19Q5SWL8 479 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 ZNF467Q7Z7K2 595 aaPredicted RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 TEX2Q8IWB9 1127 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 ZNF713Q8N859 430 aaPredicted RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 FAM133AQ8N9E0 248 aa19.93■□□□□ 0.78
DNMT1-212ENST00000587197 RNF26Q9BY78 433 aaPredicted RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 COLQQ9Y215 455 aaPredicted RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 V9GY48 417 aaPredicted RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 MKI67P46013 3256 aaKnown RBP19.93■□□□□ 0.78
DNMT1-212ENST00000587197 KBTBD13C9JR72 458 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 CPLX1O14810 134 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 SCRN1Q12765 414 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 BAATQ14032 418 aaPredicted RBP19.92■□□□□ 0.78
DNMT1-212ENST00000587197 CHRDL2Q6WN34 429 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 RNF207Q6ZRF8 634 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 C7orf61Q8IZ16 206 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
DNMT1-212ENST00000587197 ZSCAN31Q96LW9 406 aaPredicted RBP19.92■□□□□ 0.78
DNMT1-212ENST00000587197 SENP6Q9GZR1 1112 aaPredicted RBP19.92■□□□□ 0.78
DNMT1-212ENST00000587197 LOC102724159A0A0B4J2E5 919 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 CDKL5O76039 1030 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 SLC34A2O95436 690 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 RPS6P62753 249 aaKnown RBP19.91■□□□□ 0.78
DNMT1-212ENST00000587197 STK3Q13188 491 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 PWP2Q15269 919 aaKnown RBP19.91■□□□□ 0.78
DNMT1-212ENST00000587197 GTF3C6Q969F1 213 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 SH2B1Q9NRF2 756 aaPredicted RBP19.91■□□□□ 0.78
DNMT1-212ENST00000587197 SYNGAP1Q96PV0 1343 aa19.91■□□□□ 0.78
DNMT1-212ENST00000587197 PLXNA1Q9UIW2 1896 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 SMCHD1A6NHR9 2005 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 OPLAHO14841 1288 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 RARBP10826 455 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 AKR1A1P14550 325 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 MCM2P49736 904 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 AKAP17AQ02040 695 aaKnown RBP19.9■□□□□ 0.78
DNMT1-212ENST00000587197 PFKFB3Q16875 520 aaPredicted RBP19.9■□□□□ 0.78
DNMT1-212ENST00000587197 PPP1R18Q6NYC8 613 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 MAMDC4Q6UXC1 1216 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 TRIM22Q8IYM9 498 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 FRMPD3Q5JV73 1810 aa19.9■□□□□ 0.78
DNMT1-212ENST00000587197 hCG_1642624A0A1W2PR95 340 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 LARGE1O95461 756 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-212ENST00000587197 SCG2P13521 617 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 HSD17B4P51659 736 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 SSRP1Q08945 709 aaKnown RBP19.89■□□□□ 0.77
DNMT1-212ENST00000587197 PKN1Q16512 942 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 ANO1Q5XXA6 986 aa19.89■□□□□ 0.77
DNMT1-212ENST00000587197 NOL8Q76FK4 1167 aaKnown RBP19.89■□□□□ 0.77
DNMT1-212ENST00000587197 PHKBQ93100 1093 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms