RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 ERO1AQ96HE7 468 aa14.35□□□□□ -0.11
ABCD4-223ENST00000555904 R3HDMLQ9H3Y0 253 aa14.35□□□□□ -0.11
ABCD4-223ENST00000555904 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
ABCD4-223ENST00000555904 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
ABCD4-223ENST00000555904 KCNJ14Q9UNX9 436 aa14.35□□□□□ -0.11
ABCD4-223ENST00000555904 COL11A1P12107 1806 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-223ENST00000555904 PIK3CDO00329 1044 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-223ENST00000555904 PSMC4P43686 418 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
ABCD4-223ENST00000555904 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 BLIDQ8IZY5 108 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
ABCD4-223ENST00000555904 A1CFQ9NQ94 594 aaKnown RBP14.34□□□□□ -0.11
ABCD4-223ENST00000555904 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
ABCD4-223ENST00000555904 SLC15A5A6NIM6 579 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 POTEB2H3BUK9 544 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 OPLAHO14841 1288 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 STX6O43752 255 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 SYT1P21579 422 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 PTPREP23469 700 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 HSD17B4P51659 736 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 DPP9Q86TI2 863 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
ABCD4-223ENST00000555904 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
ABCD4-223ENST00000555904 CCDC194A0A1B0GVG4 234 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 B4DLN1 442 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 GNRH1P01148 92 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 HOXD10P28358 340 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 ADORA2AP29274 412 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 GHRHRQ02643 423 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 GRB14Q14449 540 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 UBE2SQ16763 222 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 KRT25Q7Z3Z0 450 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 ZNF296Q8WUU4 475 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-223ENST00000555904 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 BIN2Q9UBW5 565 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-223ENST00000555904 MYH6P13533 1939 aa14.32□□□□□ -0.12
ABCD4-223ENST00000555904 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
ABCD4-223ENST00000555904 MEIS2O14770 477 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 PGK2P07205 417 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 CD99L2Q8TCZ2 262 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-223ENST00000555904 TRIM47Q96LD4 638 aa14.31□□□□□ -0.12
ABCD4-223ENST00000555904 FOXP1Q9H334 677 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-223ENST00000555904 BAZ2BQ9UIF8 2168 aaKnown RBP14.3□□□□□ -0.12
ABCD4-223ENST00000555904 BTBD18B2RXH4 712 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 RGS2P41220 211 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 CLK2P49760 499 aaKnown RBP14.3□□□□□ -0.12
ABCD4-223ENST00000555904 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
ABCD4-223ENST00000555904 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 DNERQ8NFT8 737 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 NSUN6Q8TEA1 469 aaKnown RBP14.3□□□□□ -0.12
ABCD4-223ENST00000555904 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
ABCD4-223ENST00000555904 DNAJC25-GNG10A0A024R161 153 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 HSPA1AP0DMV8 641 aaKnown RBP14.29□□□□□ -0.12
ABCD4-223ENST00000555904 HSPA1BP0DMV9 641 aaKnown RBP14.29□□□□□ -0.12
ABCD4-223ENST00000555904 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-223ENST00000555904 NUCB2P80303 420 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 NR5A1Q13285 461 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 NPY5RQ15761 445 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 MORN1Q5T089 497 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 PIK3AP1Q6ZUJ8 805 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 OXER1Q8TDS5 423 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 APBA2Q99767 749 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-223ENST00000555904 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
ABCD4-223ENST00000555904 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
ABCD4-223ENST00000555904 LOC102724159A0A0B4J2E5 919 aa14.28□□□□□ -0.12
ABCD4-223ENST00000555904 ZSCAN22P10073 491 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-223ENST00000555904 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
ABCD4-223ENST00000555904 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.124e-11■■■□□ 14.9
ABCD4-223ENST00000555904 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
ABCD4-223ENST00000555904 PDE4DQ08499 809 aa14.28□□□□□ -0.12
ABCD4-223ENST00000555904 PWP2Q15269 919 aaKnown RBP14.28□□□□□ -0.12
ABCD4-223ENST00000555904 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
ABCD4-223ENST00000555904 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms