RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	OTUD7B	Q6GQQ9	843 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	FAM173B	Q6P4H8	233 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	MOXD1	Q6UVY6	613 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	NUDT18	Q6ZVK8	323 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	FBXO11	Q86XK2	927 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	MCF2L2	Q86YR7	1114 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	SLFN12	Q8IYM2	578 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	GPC2	Q8N158	579 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	SLC44A5	Q8NCS7	719 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	ERMN	Q8TAM6	284 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	BBX	Q8WY36	941 aa	Predicted RBP	7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	PGBD1	Q96JS3	809 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	GSDMA	Q96QA5	445 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	PPP1R9B	Q96SB3	815 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	GML	Q99445	158 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	FEZ1	Q99689	392 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	ZNF341	Q9BYN7	854 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	NT5C3A	Q9H0P0	336 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	PSTPIP2	Q9H939	334 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	RIC8A	Q9NPQ8	531 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	DDX4	Q9NQI0	724 aa	Known RBP	7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	MTMR7	Q9Y216	660 aa		7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	MRPL11	Q9Y3B7	192 aa	Known RBP	7.09	□□□□□ -1.27
PABPC4-222	ENST00000527718	SLX4	Q8IY92	1834 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PITPNM2	Q9BZ72	1349 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	KDM3A	Q9Y4C1	1321 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718		A0A1B0GVL5	298 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	USP17L5	A8MUK1	530 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	KIF28P	B7ZC32	967 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718		F5H6K3	240 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	FZD9	O00144	591 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	IKBKB	O14920	756 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	GRIN3B	O60391	1043 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	FGFR1OP	O95684	399 aa	Known RBP	7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	OR52Z1	P0C646	297 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	SLFN14	P0C7P3	912 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	EEF2	P13639	858 aa	Known RBP	7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	LIG1	P18858	919 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	ATP2B1	P20020	1258 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	MARCKS	P29966	332 aa	Predicted RBP	7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	NDUFA8	P51970	172 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	NLRP12	P59046	1061 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	KLRC3	Q07444	240 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	NFIA	Q12857	509 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PTGDR	Q13258	359 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	POSTN	Q15063	836 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PTPA	Q15257	358 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	CAMK4	Q16566	473 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	SYDE2	Q5VT97	1194 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	HAUS3	Q68CZ6	603 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	WWC2	Q6AWC2	1192 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PPP4R3A	Q6IN85	833 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	USP17L2	Q6R6M4	530 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	KRBA2	Q6ZNG9	492 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	DRC7	Q8IY82	874 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	LRRC47	Q8N1G4	583 aa	Known RBP	7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	ENGASE	Q8NFI3	743 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PRMT6	Q96LA8	375 aa	Predicted RBP	7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	CTAGE1	Q96RT6	745 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	CDHR5	Q9HBB8	845 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	VAT1L	Q9HCJ6	419 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	TMX2	Q9Y320	296 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	PCDHA1	Q9Y5I3	950 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	TAF1	P21675	1872 aa		7.08	□□□□□ -1.28
PABPC4-222	ENST00000527718	ABCB11	O95342	1321 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	YDJC	A8MPS7	323 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718		B4DLN1	442 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	C19orf81	C9J6K1	198 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	TBX3	O15119	743 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	WDR46	O15213	610 aa	Known RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	CCNT1	O60563	726 aa	Known RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	PPFIA3	O75145	1194 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	GH2	P01242	217 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	TPM1	P09493	284 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	ERCC5	P28715	1186 aa	Predicted RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	GUCY1A2	P33402	732 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	MCM7	P33993	719 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	CAP2	P40123	477 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	STAT6	P42226	847 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	GSDMD	P57764	484 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	SPAG1	Q07617	926 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	NR5A1	Q13285	461 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	SNW1	Q13573	536 aa	Known RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	COL9A3	Q14050	684 aa	Predicted RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	PDIA5	Q14554	519 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	SEPT2	Q15019	361 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	CALCRL	Q16602	461 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	TPD52L1	Q16890	204 aa	Predicted RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	KIF4B	Q2VIQ3	1234 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	ANO6	Q4KMQ2	910 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	FILIP1L	Q4L180	1135 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	LCE2A	Q5TA79	106 aa	Predicted RBP	7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	RRAGB	Q5VZM2	374 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	KRT79	Q5XKE5	535 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	BTNL9	Q6UXG8	535 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	KRT26	Q7Z3Y9	468 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	CKAP2L	Q8IYA6	745 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	ADGRF4	Q8IZF3	695 aa		7.07	□□□□□ -1.28
PABPC4-222	ENST00000527718	CMTR1	Q8N1G2	835 aa	Known RBP	7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms