RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 EFEMP2O95967 443 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 CFPP27918 469 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 VIPR1P32241 457 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 FXNQ16595 210 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 ZNF385BQ569K4 471 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 TMEM151BQ8IW70 566 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 TMEM52Q8NDY8 209 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 BVESQ8NE79 360 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 PDLIM7Q9NR12 457 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 CNOT6Q9ULM6 557 aaKnown RBP5.38□□□□□ -1.55
CAST-242ENST00000515063 CARMIL1Q5VZK9 1371 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 FANCD2Q9BXW9 1451 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 EFCAB5A4FU69 1503 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 C2orf71A6NGG8 1288 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 NUDT19A8MXV4 375 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 SMAD7O15105 426 aaKnown RBP5.37□□□□□ -1.55
CAST-242ENST00000515063 SRGAP3O43295 1099 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 CYBBP04839 570 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 PAMP19021 973 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 MAPKAPK2P49137 400 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 MVKQ03426 396 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 CBX2Q14781 532 aaPredicted RBP5.37□□□□□ -1.55
CAST-242ENST00000515063 DPY19L1Q2PZI1 675 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 LARP1BQ659C4 914 aaKnown RBP5.37□□□□□ -1.55
CAST-242ENST00000515063 BICRALQ6AI39 1079 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 ZC3H14Q6PJT7 736 aaKnown RBP5.37□□□□□ -1.55
CAST-242ENST00000515063 CILP2Q8IUL8 1156 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 SIGLEC10Q96LC7 697 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 SUSD2Q9UGT4 822 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 MBD1Q9UIS9 605 aaPredicted RBP5.37□□□□□ -1.55
CAST-242ENST00000515063 IRAK3Q9Y616 596 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 FHAD1B1AJZ9 1412 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 WDR97A6NE52 1622 aa5.37□□□□□ -1.55
CAST-242ENST00000515063 N4BP3O15049 544 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 VAMP4O75379 141 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 SDHBP21912 280 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 CEBPAP49715 358 aaPredicted RBP5.36□□□□□ -1.55
CAST-242ENST00000515063 PAQR3Q6TCH7 311 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 TMC6Q7Z403 805 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 SLC43A3Q8NBI5 491 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 PPP1R14AQ96A00 147 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 ZNF428Q96B54 188 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 TINF2Q9BSI4 451 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 EMC9Q9Y3B6 208 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 AQRO60306 1485 aaKnown RBP eCLIP5.36□□□□□ -1.552e-6■■■■■ 27.8
CAST-242ENST00000515063 TOPBP1Q92547 1522 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 TIAM1Q13009 1591 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 CFAP43Q8NDM7 1665 aa5.36□□□□□ -1.55
CAST-242ENST00000515063 CTTNBP2Q8WZ74 1663 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 NPHP3-ACAD11A0A0J9YXS1 232 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 AGRPO00253 132 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 DDAH1O94760 285 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 KCNH1O95259 989 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 FGRP09769 529 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 ZSCAN22P10073 491 aaPredicted RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 DNAJA1P31689 397 aaKnown RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 TARBP2Q15633 366 aaKnown RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 C6orf15Q6UXA7 325 aaPredicted RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 RPTNQ6XPR3 784 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 AMIGO3Q86WK7 504 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 MZB1Q8WU39 189 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 EPN3Q9H201 632 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 GCM1Q9NP62 436 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 LRP2BPQ9P2M1 347 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 APEX2Q9UBZ4 518 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 DBR1Q9UK59 544 aaKnown RBP5.35□□□□□ -1.55
CAST-242ENST00000515063 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 KCTD3Q9Y597 815 aa5.35□□□□□ -1.55
CAST-242ENST00000515063 POLA1P09884 1462 aaPredicted RBP5.34□□□□□ -1.55
CAST-242ENST00000515063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAST-242ENST00000515063 NPHS1O60500 1241 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 DBHP09172 617 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 PFKLP17858 780 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 TCERG1LQ5VWI1 586 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 IQCEQ6IPM2 695 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 SPOCD1Q6ZMY3 1216 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 EEPD1Q7L9B9 569 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 C1QL4Q86Z23 238 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 LZTR1Q8N653 840 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 MCMBPQ9BTE3 642 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 SGPP1Q9BX95 441 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
CAST-242ENST00000515063 PDS5BQ9NTI5 1447 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 CCNB3Q8WWL7 1395 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 SUSD5O60279 629 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 MSL3P1P0C860 447 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 SCRN1Q12765 414 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 SV2CQ496J9 727 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 FBLN7Q53RD9 439 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 GTF2IRD2BQ6EKJ0 949 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 GTF2IRD2Q86UP8 949 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms